RNA–Protein interactions for RNA: ENST00000496189.1

SF3A1-209, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 693 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-209ENST00000496189 BSPRYQ5W0U4 402 aa17.15■□□□□ 0.34
SF3A1-209ENST00000496189 NUDT18Q6ZVK8 323 aa17.15■□□□□ 0.34
SF3A1-209ENST00000496189 ADGRG2Q8IZP9 1017 aa17.15■□□□□ 0.34
SF3A1-209ENST00000496189 RNF214Q8ND24 703 aa17.15■□□□□ 0.34
SF3A1-209ENST00000496189 CD101Q93033 1021 aa17.15■□□□□ 0.34
SF3A1-209ENST00000496189 FAM149B1Q96BN6 582 aa17.15■□□□□ 0.34
SF3A1-209ENST00000496189 ZFRQ96KR1 1074 aaKnown RBP17.15■□□□□ 0.34
SF3A1-209ENST00000496189 ZSWIM1Q9BR11 485 aa17.15■□□□□ 0.34
SF3A1-209ENST00000496189 MIS12Q9H081 205 aa17.15■□□□□ 0.34
SF3A1-209ENST00000496189 SYNCQ9H7C4 482 aa17.15■□□□□ 0.34
SF3A1-209ENST00000496189 DLGAP2Q9P1A6 1054 aa17.15■□□□□ 0.34
SF3A1-209ENST00000496189 A0A1W2PQC6 194 aa17.14■□□□□ 0.33
SF3A1-209ENST00000496189 SLC12A8A0AV02 714 aa17.14■□□□□ 0.33
SF3A1-209ENST00000496189 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.14■□□□□ 0.33
SF3A1-209ENST00000496189 H0Y858 1186 aa17.14■□□□□ 0.33
SF3A1-209ENST00000496189 TRDMT1O14717 391 aaKnown RBP17.14■□□□□ 0.33
SF3A1-209ENST00000496189 CAPN9O14815 690 aa17.14■□□□□ 0.33
SF3A1-209ENST00000496189 LTFP02788 710 aa17.14■□□□□ 0.33
SF3A1-209ENST00000496189 CYP17A1P05093 508 aa17.14■□□□□ 0.33
SF3A1-209ENST00000496189 ADH5P11766 374 aa17.14■□□□□ 0.33
SF3A1-209ENST00000496189 PGFP49763 221 aa17.14■□□□□ 0.33
SF3A1-209ENST00000496189 POLR2FP61218 127 aaKnown RBP17.14■□□□□ 0.33
SF3A1-209ENST00000496189 NR1I3Q14994 352 aa17.14■□□□□ 0.33
SF3A1-209ENST00000496189 DHCR24Q15392 516 aa17.14■□□□□ 0.33
SF3A1-209ENST00000496189 FBXO43Q4G163 708 aa17.14■□□□□ 0.33
SF3A1-209ENST00000496189 DPY19L2P1Q6NXN4 242 aa17.14■□□□□ 0.33
SF3A1-209ENST00000496189 DENND1BQ6P3S1 775 aa17.14■□□□□ 0.33
SF3A1-209ENST00000496189 TXNDC11Q6PKC3 985 aa17.14■□□□□ 0.33
SF3A1-209ENST00000496189 HTR3DQ70Z44 454 aa17.14■□□□□ 0.33
SF3A1-209ENST00000496189 CACNA2D4Q7Z3S7 1137 aa17.14■□□□□ 0.33
SF3A1-209ENST00000496189 FAM71AQ8IYT1 594 aa17.14■□□□□ 0.33
SF3A1-209ENST00000496189 MSANTD4Q8NCY6 345 aa17.14■□□□□ 0.33
SF3A1-209ENST00000496189 IPO4Q8TEX9 1081 aaKnown RBP17.14■□□□□ 0.33
SF3A1-209ENST00000496189 NAP1L5Q96NT1 182 aaPredicted RBP17.14■□□□□ 0.33
SF3A1-209ENST00000496189 NAA15Q9BXJ9 866 aaKnown RBP17.14■□□□□ 0.33
SF3A1-209ENST00000496189 GANQ9H2C0 597 aa17.14■□□□□ 0.33
SF3A1-209ENST00000496189 CHRDQ9H2X0 955 aa17.14■□□□□ 0.33
SF3A1-209ENST00000496189 PCDHGC3Q9UN70 934 aa17.14■□□□□ 0.33
SF3A1-209ENST00000496189 YJEFN3A6XGL0 299 aa17.13■□□□□ 0.33
SF3A1-209ENST00000496189 E7ENQ6 273 aa17.13■□□□□ 0.33
SF3A1-209ENST00000496189 PIK3R2O00459 728 aa17.13■□□□□ 0.33
SF3A1-209ENST00000496189 SCAMP3O14828 347 aaKnown RBP17.13■□□□□ 0.33
SF3A1-209ENST00000496189 MDM4O15151 490 aa17.13■□□□□ 0.33
SF3A1-209ENST00000496189 TEX33O43247 280 aa17.13■□□□□ 0.33
SF3A1-209ENST00000496189 CBFA2T2O43439 604 aa17.13■□□□□ 0.33
SF3A1-209ENST00000496189 ATG13O75143 517 aa17.13■□□□□ 0.33
SF3A1-209ENST00000496189 HMBSP08397 361 aa17.13■□□□□ 0.33
SF3A1-209ENST00000496189 CHRNB1P11230 501 aa17.13■□□□□ 0.33
SF3A1-209ENST00000496189 CHKAP35790 457 aa17.13■□□□□ 0.33
SF3A1-209ENST00000496189 HARS2P49590 506 aaKnown RBP17.13■□□□□ 0.33
SF3A1-209ENST00000496189 KLK7P49862 253 aa17.13■□□□□ 0.33
SF3A1-209ENST00000496189 CCR3P51677 355 aa17.13■□□□□ 0.33
SF3A1-209ENST00000496189 ANO4Q32M45 955 aa17.13■□□□□ 0.33
SF3A1-209ENST00000496189 TMEM196Q5HYL7 178 aa17.13■□□□□ 0.33
SF3A1-209ENST00000496189 ZC3H14Q6PJT7 736 aaKnown RBP17.13■□□□□ 0.33
SF3A1-209ENST00000496189 FMNL3Q8IVF7 1028 aa17.13■□□□□ 0.33
SF3A1-209ENST00000496189 BBS7Q8IWZ6 715 aa17.13■□□□□ 0.33
SF3A1-209ENST00000496189 EDEM1Q92611 657 aa17.13■□□□□ 0.33
SF3A1-209ENST00000496189 PLD4Q96BZ4 506 aa17.13■□□□□ 0.33
SF3A1-209ENST00000496189 LHX5Q9H2C1 402 aa17.13■□□□□ 0.33
SF3A1-209ENST00000496189 ACP6Q9NPH0 428 aa17.13■□□□□ 0.33
SF3A1-209ENST00000496189 FBXO4Q9UKT5 387 aa17.13■□□□□ 0.33
SF3A1-209ENST00000496189 COL4A3Q01955 1670 aa17.13■□□□□ 0.33
SF3A1-209ENST00000496189 OTOL1A6NHN0 477 aaPredicted RBP17.12■□□□□ 0.33
SF3A1-209ENST00000496189 F8VZ95 297 aa17.12■□□□□ 0.33
SF3A1-209ENST00000496189 NCAM1P13591 858 aa17.12■□□□□ 0.33
SF3A1-209ENST00000496189 CLCN1P35523 988 aa17.12■□□□□ 0.33
SF3A1-209ENST00000496189 EIF2DP41214 584 aaKnown RBP17.12■□□□□ 0.33
SF3A1-209ENST00000496189 GALK1P51570 392 aa17.12■□□□□ 0.33
SF3A1-209ENST00000496189 TCF15Q12870 199 aa17.12■□□□□ 0.33
SF3A1-209ENST00000496189 PDCLQ13371 301 aa17.12■□□□□ 0.33
SF3A1-209ENST00000496189 LY6G5CQ5SRR4 150 aa17.12■□□□□ 0.33
SF3A1-209ENST00000496189 SLC47A2Q86VL8 602 aa17.12■□□□□ 0.33
SF3A1-209ENST00000496189 PASD1Q8IV76 773 aa17.12■□□□□ 0.33
SF3A1-209ENST00000496189 SPEM1Q8N4L4 309 aa17.12■□□□□ 0.33
SF3A1-209ENST00000496189 TMEM35BQ8NCS4 154 aa17.12■□□□□ 0.33
SF3A1-209ENST00000496189 NDRG1Q92597 394 aaKnown RBP17.12■□□□□ 0.33
SF3A1-209ENST00000496189 XPO6Q96QU8 1125 aaKnown RBP17.12■□□□□ 0.33
SF3A1-209ENST00000496189 NLRC4Q9NPP4 1024 aa17.12■□□□□ 0.33
SF3A1-209ENST00000496189 SPHK2Q9NRA0 654 aa17.12■□□□□ 0.33
SF3A1-209ENST00000496189 IFNKQ9P0W0 207 aa17.12■□□□□ 0.33
SF3A1-209ENST00000496189 WDR35Q9P2L0 1181 aa17.12■□□□□ 0.33
SF3A1-209ENST00000496189 AJAP1Q9UKB5 411 aaPredicted RBP17.12■□□□□ 0.33
SF3A1-209ENST00000496189 HBS1LQ9Y450 684 aaKnown RBP17.12■□□□□ 0.33
SF3A1-209ENST00000496189 SHISA7A6NL88 538 aa17.11■□□□□ 0.33
SF3A1-209ENST00000496189 E5RJQ4 531 aa17.11■□□□□ 0.33
SF3A1-209ENST00000496189 STC2O76061 302 aa17.11■□□□□ 0.33
SF3A1-209ENST00000496189 CYBBP04839 570 aa17.11■□□□□ 0.33
SF3A1-209ENST00000496189 CCDC172P0C7W6 258 aa17.11■□□□□ 0.33
SF3A1-209ENST00000496189 PNMA6AP0CW24 399 aaPredicted RBP17.11■□□□□ 0.33
SF3A1-209ENST00000496189 CYP11B1P15538 503 aa17.11■□□□□ 0.33
SF3A1-209ENST00000496189 CORO1AP31146 461 aaKnown RBP17.11■□□□□ 0.33
SF3A1-209ENST00000496189 PLA2G5P39877 138 aa17.11■□□□□ 0.33
SF3A1-209ENST00000496189 STAT1P42224 750 aa17.11■□□□□ 0.33
SF3A1-209ENST00000496189 NRLP54845 237 aa17.11■□□□□ 0.33
SF3A1-209ENST00000496189 NHLH1Q02575 133 aa17.11■□□□□ 0.33
SF3A1-209ENST00000496189 MTAPQ13126 283 aa17.11■□□□□ 0.33
SF3A1-209ENST00000496189 CCINQ13939 588 aa17.11■□□□□ 0.33
SF3A1-209ENST00000496189 TOGARAM2Q6ZUX3 1019 aa17.11■□□□□ 0.33
SF3A1-209ENST00000496189 TMEM110Q86TL2 294 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms