RNA–Protein interactions for RNA: ENST00000495799.5

PPP1R3F-205, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

TSL 1 (best) BASIC

Gene PPP1R3F, Length 1,537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-205ENST00000495799 CALN1Q9BXU9 219 aa25.4■■□□□ 1.66
PPP1R3F-205ENST00000495799 FRMD8P1Q9BZ68 369 aaPredicted RBP25.4■■□□□ 1.66
PPP1R3F-205ENST00000495799 ZBP1Q9H171 429 aa25.4■■□□□ 1.66
PPP1R3F-205ENST00000495799 RASAL2Q9UJF2 1139 aa25.4■■□□□ 1.66
PPP1R3F-205ENST00000495799 RAB21Q9UL25 225 aa25.4■■□□□ 1.66
PPP1R3F-205ENST00000495799 AP4E1Q9UPM8 1137 aa25.4■■□□□ 1.66
PPP1R3F-205ENST00000495799 TCRBV7S2A1N4TA0A589 114 aa25.39■■□□□ 1.66
PPP1R3F-205ENST00000495799 FAM92AA1XBS5 289 aa25.39■■□□□ 1.66
PPP1R3F-205ENST00000495799 LINC00271P0C7V0 271 aa25.39■■□□□ 1.66
PPP1R3F-205ENST00000495799 ATF2P15336 505 aa25.39■■□□□ 1.66
PPP1R3F-205ENST00000495799 ARSEP51690 589 aa25.39■■□□□ 1.66
PPP1R3F-205ENST00000495799 NME3Q13232 169 aa25.39■■□□□ 1.66
PPP1R3F-205ENST00000495799 BRD3Q15059 726 aa25.39■■□□□ 1.66
PPP1R3F-205ENST00000495799 ARL13BQ3SXY8 428 aa25.39■■□□□ 1.66
PPP1R3F-205ENST00000495799 RAB6CQ53S08 254 aa25.39■■□□□ 1.66
PPP1R3F-205ENST00000495799 RASIP1Q5U651 963 aa25.39■■□□□ 1.66
PPP1R3F-205ENST00000495799 SDHAF4Q5VUM1 108 aa25.39■■□□□ 1.66
PPP1R3F-205ENST00000495799 OTUD1Q5VV17 481 aaPredicted RBP25.39■■□□□ 1.66
PPP1R3F-205ENST00000495799 RNF139Q8WU17 664 aa25.39■■□□□ 1.66
PPP1R3F-205ENST00000495799 EDEM1Q92611 657 aa25.39■■□□□ 1.66
PPP1R3F-205ENST00000495799 FBXO32Q969P5 355 aa25.39■■□□□ 1.66
PPP1R3F-205ENST00000495799 ZNF670Q9BS34 389 aa25.39■■□□□ 1.66
PPP1R3F-205ENST00000495799 RAB6CQ9H0N0 254 aa25.39■■□□□ 1.66
PPP1R3F-205ENST00000495799 EPC1Q9H2F5 836 aa25.39■■□□□ 1.66
PPP1R3F-205ENST00000495799 RXFP1Q9HBX9 757 aa25.39■■□□□ 1.66
PPP1R3F-205ENST00000495799 DDIT4Q9NX09 232 aa25.39■■□□□ 1.66
PPP1R3F-205ENST00000495799 PCYOX1Q9UHG3 505 aa25.39■■□□□ 1.66
PPP1R3F-205ENST00000495799 FEZ2Q9UHY8 353 aaPredicted RBP25.39■■□□□ 1.66
PPP1R3F-205ENST00000495799 LZTS1Q9Y250 596 aa25.39■■□□□ 1.66
PPP1R3F-205ENST00000495799 NR2E1Q9Y466 385 aa25.39■■□□□ 1.66
PPP1R3F-205ENST00000495799 FAM187AA6NFU0 413 aa25.38■■□□□ 1.65
PPP1R3F-205ENST00000495799 RAD51CO43502 376 aa25.38■■□□□ 1.65
PPP1R3F-205ENST00000495799 KRT10P13645 584 aa25.38■■□□□ 1.65
PPP1R3F-205ENST00000495799 ELF1P32519 619 aa25.38■■□□□ 1.65
PPP1R3F-205ENST00000495799 LLGL1Q15334 1064 aa25.38■■□□□ 1.65
PPP1R3F-205ENST00000495799 DPYSL2Q16555 572 aa25.38■■□□□ 1.65
PPP1R3F-205ENST00000495799 CCNG2Q16589 344 aa25.38■■□□□ 1.65
PPP1R3F-205ENST00000495799 FAM131BQ86XD5 332 aa25.38■■□□□ 1.65
PPP1R3F-205ENST00000495799 RFX6Q8HWS3 928 aa25.38■■□□□ 1.65
PPP1R3F-205ENST00000495799 KLHL23Q8NBE8 558 aa25.38■■□□□ 1.65
PPP1R3F-205ENST00000495799 FAM71BQ8TC56 605 aa25.38■■□□□ 1.65
PPP1R3F-205ENST00000495799 GRK7Q8WTQ7 553 aa25.38■■□□□ 1.65
PPP1R3F-205ENST00000495799 NTAN1Q96AB6 310 aa25.38■■□□□ 1.65
PPP1R3F-205ENST00000495799 ADAM33Q9BZ11 813 aa25.38■■□□□ 1.65
PPP1R3F-205ENST00000495799 CRISPLD1Q9H336 500 aa25.38■■□□□ 1.65
PPP1R3F-205ENST00000495799 TLR8Q9NR97 1041 aaKnown RBP25.38■■□□□ 1.65
PPP1R3F-205ENST00000495799 AMACRQ9UHK6 382 aa25.38■■□□□ 1.65
PPP1R3F-205ENST00000495799 FZD10Q9ULW2 581 aa25.38■■□□□ 1.65
PPP1R3F-205ENST00000495799 NR2E3Q9Y5X4 410 aa25.38■■□□□ 1.65
PPP1R3F-205ENST00000495799 ERLIN1O75477 346 aa25.37■■□□□ 1.65
PPP1R3F-205ENST00000495799 HEXIM1O94992 359 aaKnown RBP25.37■■□□□ 1.65
PPP1R3F-205ENST00000495799 CTNNB1P35222 781 aa25.37■■□□□ 1.65
PPP1R3F-205ENST00000495799 COILP38432 576 aaPredicted RBP25.37■■□□□ 1.65
PPP1R3F-205ENST00000495799 DR1Q01658 176 aa25.37■■□□□ 1.65
PPP1R3F-205ENST00000495799 DPYSL3Q14195 570 aa25.37■■□□□ 1.65
PPP1R3F-205ENST00000495799 EFHC2Q5JST6 749 aa25.37■■□□□ 1.65
PPP1R3F-205ENST00000495799 CCDC137Q6PK04 289 aaKnown RBP25.37■■□□□ 1.65
PPP1R3F-205ENST00000495799 BBS12Q6ZW61 710 aa25.37■■□□□ 1.65
PPP1R3F-205ENST00000495799 IFT20Q8IY31 132 aa25.37■■□□□ 1.65
PPP1R3F-205ENST00000495799 ZDHHC14Q8IZN3 488 aa25.37■■□□□ 1.65
PPP1R3F-205ENST00000495799 TRAF3IP1Q8TDR0 691 aaPredicted RBP25.37■■□□□ 1.65
PPP1R3F-205ENST00000495799 DCLK3Q9C098 648 aa25.37■■□□□ 1.65
PPP1R3F-205ENST00000495799 RAB17Q9H0T7 212 aa25.37■■□□□ 1.65
PPP1R3F-205ENST00000495799 PRDM16Q9HAZ2 1276 aa25.37■■□□□ 1.65
PPP1R3F-205ENST00000495799 PCDH18Q9HCL0 1135 aa25.37■■□□□ 1.65
PPP1R3F-205ENST00000495799 RCOR3Q9P2K3 495 aaPredicted RBP25.37■■□□□ 1.65
PPP1R3F-205ENST00000495799 SYNJ2BP-COX16A0A087WUM0 186 aa25.37■■□□□ 1.65
PPP1R3F-205ENST00000495799 A0A1W2PQH9 124 aa25.37■■□□□ 1.65
PPP1R3F-205ENST00000495799 SLC38A8A6NNN8 435 aa25.37■■□□□ 1.65
PPP1R3F-205ENST00000495799 DNAJB2P25686 324 aa25.37■■□□□ 1.65
PPP1R3F-205ENST00000495799 BMPR1AP36894 532 aa25.37■■□□□ 1.65
PPP1R3F-205ENST00000495799 ALDH1A3P47895 512 aa25.37■■□□□ 1.65
PPP1R3F-205ENST00000495799 ATXN1P54253 815 aaKnown RBP25.37■■□□□ 1.65
PPP1R3F-205ENST00000495799 ANKS1BQ7Z6G8 1248 aa25.37■■□□□ 1.65
PPP1R3F-205ENST00000495799 SCD5Q86SK9 330 aa25.37■■□□□ 1.65
PPP1R3F-205ENST00000495799 CCDC105Q8IYK2 499 aa25.37■■□□□ 1.65
PPP1R3F-205ENST00000495799 DQX1Q8TE96 717 aaKnown RBP25.37■■□□□ 1.65
PPP1R3F-205ENST00000495799 PNKPQ96T60 521 aa25.37■■□□□ 1.65
PPP1R3F-205ENST00000495799 HERPUD2Q9BSE4 406 aa25.37■■□□□ 1.65
PPP1R3F-205ENST00000495799 SMOC2Q9H3U7 446 aa25.37■■□□□ 1.65
PPP1R3F-205ENST00000495799 DHX35Q9H5Z1 703 aaKnown RBP25.37■■□□□ 1.65
PPP1R3F-205ENST00000495799 OLA1Q9NTK5 396 aaKnown RBP25.37■■□□□ 1.65
PPP1R3F-205ENST00000495799 PIGVQ9NUD9 493 aa25.37■■□□□ 1.65
PPP1R3F-205ENST00000495799 CLIC5Q9NZA1 410 aa25.37■■□□□ 1.65
PPP1R3F-205ENST00000495799 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP25.37■■□□□ 1.65
PPP1R3F-205ENST00000495799 COX16Q9P0S2 106 aa25.37■■□□□ 1.65
PPP1R3F-205ENST00000495799 CCDC151A5D8V7 595 aa25.36■■□□□ 1.65
PPP1R3F-205ENST00000495799 SOAT2O75908 522 aa25.36■■□□□ 1.65
PPP1R3F-205ENST00000495799 PITX1P78337 314 aaPredicted RBP25.36■■□□□ 1.65
PPP1R3F-205ENST00000495799 ZC3H12AQ5D1E8 599 aaKnown RBP25.36■■□□□ 1.65
PPP1R3F-205ENST00000495799 TAC4Q86UU9 113 aa25.36■■□□□ 1.65
PPP1R3F-205ENST00000495799 CCDC185Q8N715 623 aa25.36■■□□□ 1.65
PPP1R3F-205ENST00000495799 PDZD8Q8NEN9 1154 aa25.36■■□□□ 1.65
PPP1R3F-205ENST00000495799 OVCA2Q8WZ82 227 aa25.36■■□□□ 1.65
PPP1R3F-205ENST00000495799 ABHD8Q96I13 439 aa25.36■■□□□ 1.65
PPP1R3F-205ENST00000495799 TTLL2Q9BWV7 592 aa25.36■■□□□ 1.65
PPP1R3F-205ENST00000495799 CYP4F11Q9HBI6 524 aa25.36■■□□□ 1.65
PPP1R3F-205ENST00000495799 GPATCH2LQ9NWQ4 482 aa25.36■■□□□ 1.65
PPP1R3F-205ENST00000495799 GMIPQ9P107 970 aa25.36■■□□□ 1.65
PPP1R3F-205ENST00000495799 CALCOCO1Q9P1Z2 691 aa25.36■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms