RNA–Protein interactions for RNA: ENST00000495071.6

SUPT20H-222, Transcript of SPT20 homolog, SAGA complex component, human

TSL 5

Gene SUPT20H, Length 3,669 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SUPT20H-222	ENST00000495071	MEI4	A8MW99	385 aa		13.91	□□□□□ -0.18
SUPT20H-222	ENST00000495071	ABLIM1	O14639	778 aa		13.91	□□□□□ -0.18
SUPT20H-222	ENST00000495071	TRDMT1	O14717	391 aa	Known RBP	13.91	□□□□□ -0.18
SUPT20H-222	ENST00000495071	KLF11	O14901	512 aa		13.91	□□□□□ -0.18
SUPT20H-222	ENST00000495071	TOP3B	O95985	862 aa	Known RBP	13.91	□□□□□ -0.18
SUPT20H-222	ENST00000495071	POLE2	P56282	527 aa		13.91	□□□□□ -0.18
SUPT20H-222	ENST00000495071	AP2B1	P63010	937 aa		13.91	□□□□□ -0.18
SUPT20H-222	ENST00000495071	EN1	Q05925	392 aa	Predicted RBP	13.91	□□□□□ -0.18
SUPT20H-222	ENST00000495071	UBAP2L	Q14157	1087 aa	Known RBP	13.91	□□□□□ -0.18
SUPT20H-222	ENST00000495071	HSDL1	Q3SXM5	330 aa		13.91	□□□□□ -0.18
SUPT20H-222	ENST00000495071	DNAL1	Q4LDG9	190 aa		13.91	□□□□□ -0.18
SUPT20H-222	ENST00000495071	RNF220	Q5VTB9	566 aa		13.91	□□□□□ -0.18
SUPT20H-222	ENST00000495071	RIPOR1	Q6ZS17	1223 aa		13.91	□□□□□ -0.18
SUPT20H-222	ENST00000495071	BCO2	Q9BYV7	579 aa		13.91	□□□□□ -0.18
SUPT20H-222	ENST00000495071		A6NJR5	290 aa		13.91	□□□□□ -0.18
SUPT20H-222	ENST00000495071	PRR5-ARHGAP8	B1AHC4	643 aa		13.91	□□□□□ -0.18
SUPT20H-222	ENST00000495071	GNAT1	P11488	350 aa		13.91	□□□□□ -0.18
SUPT20H-222	ENST00000495071	ARHGAP8	P85298	464 aa		13.91	□□□□□ -0.18
SUPT20H-222	ENST00000495071	LBR	Q14739	615 aa	Known RBP	13.91	□□□□□ -0.18
SUPT20H-222	ENST00000495071	PDK2	Q15119	407 aa		13.91	□□□□□ -0.18
SUPT20H-222	ENST00000495071	CAND1	Q86VP6	1230 aa	Known RBP	13.91	□□□□□ -0.18
SUPT20H-222	ENST00000495071	DDX51	Q8N8A6	666 aa	Known RBP eCLIP	13.91	□□□□□ -0.18
SUPT20H-222	ENST00000495071	C12orf29	Q8N999	325 aa		13.91	□□□□□ -0.18
SUPT20H-222	ENST00000495071	STKLD1	Q8NE28	680 aa		13.91	□□□□□ -0.18
SUPT20H-222	ENST00000495071	GSDMB	Q8TAX9	411 aa		13.91	□□□□□ -0.18
SUPT20H-222	ENST00000495071	GBP5	Q96PP8	586 aa		13.91	□□□□□ -0.18
SUPT20H-222	ENST00000495071	ARID2	Q68CP9	1835 aa		13.91	□□□□□ -0.18
SUPT20H-222	ENST00000495071	RFPL1	O75677	317 aa		13.91	□□□□□ -0.18
SUPT20H-222	ENST00000495071	CACNA2D1	P54289	1103 aa		13.91	□□□□□ -0.18
SUPT20H-222	ENST00000495071	MRPS5	P82675	430 aa	Known RBP	13.91	□□□□□ -0.18
SUPT20H-222	ENST00000495071	GOLGA7B	Q2TAP0	167 aa		13.91	□□□□□ -0.18
SUPT20H-222	ENST00000495071	CMPK2	Q5EBM0	449 aa		13.91	□□□□□ -0.18
SUPT20H-222	ENST00000495071	C16orf46	Q6P387	395 aa		13.91	□□□□□ -0.18
SUPT20H-222	ENST00000495071	SH2D5	Q6ZV89	423 aa		13.91	□□□□□ -0.18
SUPT20H-222	ENST00000495071	CDKL3	Q8IVW4	592 aa	Predicted RBP	13.91	□□□□□ -0.18
SUPT20H-222	ENST00000495071	ULK2	Q8IYT8	1036 aa		13.91	□□□□□ -0.18
SUPT20H-222	ENST00000495071	KCNN1	Q92952	543 aa		13.91	□□□□□ -0.18
SUPT20H-222	ENST00000495071	ATP2A3	Q93084	1043 aa		13.91	□□□□□ -0.18
SUPT20H-222	ENST00000495071	SPATA33	Q96N06	139 aa		13.91	□□□□□ -0.18
SUPT20H-222	ENST00000495071	SMYD2	Q9NRG4	433 aa		13.91	□□□□□ -0.18
SUPT20H-222	ENST00000495071	FAM49B	Q9NUQ9	324 aa		13.91	□□□□□ -0.18
SUPT20H-222	ENST00000495071	TXNDC16	Q9P2K2	825 aa		13.91	□□□□□ -0.18
SUPT20H-222	ENST00000495071	ZNF180	Q9UJW8	692 aa		13.91	□□□□□ -0.18
SUPT20H-222	ENST00000495071	EME2	A4GXA9	379 aa	Predicted RBP	13.9	□□□□□ -0.18
SUPT20H-222	ENST00000495071	SLC15A5	A6NIM6	579 aa		13.9	□□□□□ -0.18
SUPT20H-222	ENST00000495071	TGM2	P21980	687 aa		13.9	□□□□□ -0.18
SUPT20H-222	ENST00000495071	EPHB1	P54762	984 aa		13.9	□□□□□ -0.18
SUPT20H-222	ENST00000495071	SARNP	P82979	210 aa	Known RBP	13.9	□□□□□ -0.18
SUPT20H-222	ENST00000495071	PDE1B	Q01064	536 aa		13.9	□□□□□ -0.18
SUPT20H-222	ENST00000495071	TRMT5	Q32P41	509 aa	Known RBP	13.9	□□□□□ -0.18
SUPT20H-222	ENST00000495071	IZUMO2	Q6UXV1	221 aa		13.9	□□□□□ -0.18
SUPT20H-222	ENST00000495071	EXOC8	Q8IYI6	725 aa		13.9	□□□□□ -0.18
SUPT20H-222	ENST00000495071	PCDH19	Q8TAB3	1148 aa		13.9	□□□□□ -0.18
SUPT20H-222	ENST00000495071	C12orf42	Q96LP6	360 aa		13.9	□□□□□ -0.18
SUPT20H-222	ENST00000495071	SNRNP25	Q9BV90	132 aa	Known RBP	13.9	□□□□□ -0.18
SUPT20H-222	ENST00000495071	VPS33B	Q9H267	617 aa		13.9	□□□□□ -0.18
SUPT20H-222	ENST00000495071	PCDH18	Q9HCL0	1135 aa		13.9	□□□□□ -0.18
SUPT20H-222	ENST00000495071	XAB2	Q9HCS7	855 aa	Known RBP	13.9	□□□□□ -0.18
SUPT20H-222	ENST00000495071	PAPOLB	Q9NRJ5	636 aa	Known RBP	13.9	□□□□□ -0.18
SUPT20H-222	ENST00000495071	GPR25	O00155	361 aa		13.9	□□□□□ -0.18
SUPT20H-222	ENST00000495071	GAS2	O43903	313 aa	Known RBP	13.9	□□□□□ -0.18
SUPT20H-222	ENST00000495071	RPL10A	P62906	217 aa	Known RBP	13.9	□□□□□ -0.18
SUPT20H-222	ENST00000495071	SCUBE3	Q8IX30	993 aa		13.9	□□□□□ -0.18
SUPT20H-222	ENST00000495071	MPP5	Q8N3R9	675 aa		13.9	□□□□□ -0.18
SUPT20H-222	ENST00000495071	EBF4	Q9BQW3	602 aa		13.9	□□□□□ -0.18
SUPT20H-222	ENST00000495071	SHCBP1L	Q9BZQ2	653 aa		13.9	□□□□□ -0.18
SUPT20H-222	ENST00000495071	MINDY3	Q9H8M7	445 aa		13.9	□□□□□ -0.18
SUPT20H-222	ENST00000495071	PNPLA8	Q9NP80	782 aa		13.9	□□□□□ -0.18
SUPT20H-222	ENST00000495071	PIH1D1	Q9NWS0	290 aa	Known RBP	13.9	□□□□□ -0.18
SUPT20H-222	ENST00000495071	HBS1L	Q9Y450	684 aa	Known RBP	13.9	□□□□□ -0.18
SUPT20H-222	ENST00000495071	MAGEC1	O60732	1142 aa		13.89	□□□□□ -0.19
SUPT20H-222	ENST00000495071	ZCCHC18	P0CG32	403 aa		13.89	□□□□□ -0.19
SUPT20H-222	ENST00000495071	SATB1	Q01826	763 aa		13.89	□□□□□ -0.19
SUPT20H-222	ENST00000495071	CA9	Q16790	459 aa		13.89	□□□□□ -0.19
SUPT20H-222	ENST00000495071	LRRC36	Q1X8D7	754 aa		13.89	□□□□□ -0.19
SUPT20H-222	ENST00000495071	FASTKD1	Q53R41	847 aa	Known RBP	13.89	□□□□□ -0.19
SUPT20H-222	ENST00000495071	HIPK4	Q8NE63	616 aa		13.89	□□□□□ -0.19
SUPT20H-222	ENST00000495071	CPB2	Q96IY4	423 aa		13.89	□□□□□ -0.19
SUPT20H-222	ENST00000495071	NT5C1A	Q9BXI3	368 aa		13.89	□□□□□ -0.19
SUPT20H-222	ENST00000495071	APOBEC2	Q9Y235	224 aa	Known RBP	13.89	□□□□□ -0.19
SUPT20H-222	ENST00000495071	DNAJC16	Q9Y2G8	782 aa		13.89	□□□□□ -0.19
SUPT20H-222	ENST00000495071	MAGEA13P	A6NCF6	341 aa		13.89	□□□□□ -0.19
SUPT20H-222	ENST00000495071	DCAF8L1	A6NGE4	600 aa		13.89	□□□□□ -0.19
SUPT20H-222	ENST00000495071	NPTXR	O95502	500 aa		13.89	□□□□□ -0.19
SUPT20H-222	ENST00000495071	BPGM	P07738	259 aa		13.89	□□□□□ -0.19
SUPT20H-222	ENST00000495071	ANPEP	P15144	967 aa		13.89	□□□□□ -0.19
SUPT20H-222	ENST00000495071	SERPINB9	P50453	376 aa		13.89	□□□□□ -0.19
SUPT20H-222	ENST00000495071	SESN2	P58004	480 aa	Predicted RBP	13.89	□□□□□ -0.19
SUPT20H-222	ENST00000495071	ZNF280A	P59817	542 aa	Predicted RBP	13.89	□□□□□ -0.19
SUPT20H-222	ENST00000495071	HIC1	Q14526	733 aa		13.89	□□□□□ -0.19
SUPT20H-222	ENST00000495071	TMEM132D	Q14C87	1099 aa		13.89	□□□□□ -0.19
SUPT20H-222	ENST00000495071	MAP1S	Q66K74	1059 aa	Predicted RBP	13.89	□□□□□ -0.19
SUPT20H-222	ENST00000495071	HEATR6	Q6AI08	1181 aa	Known RBP	13.89	□□□□□ -0.19
SUPT20H-222	ENST00000495071	TRNP1	Q6NT89	227 aa		13.89	□□□□□ -0.19
SUPT20H-222	ENST00000495071	POU5F2	Q8N7G0	328 aa		13.89	□□□□□ -0.19
SUPT20H-222	ENST00000495071	C7orf31	Q8N865	590 aa		13.89	□□□□□ -0.19
SUPT20H-222	ENST00000495071	PPP4R1	Q8TF05	950 aa		13.89	□□□□□ -0.19
SUPT20H-222	ENST00000495071	CCDC124	Q96CT7	223 aa	Known RBP	13.89	□□□□□ -0.19
SUPT20H-222	ENST00000495071	DDX50	Q9BQ39	737 aa	Known RBP	13.89	□□□□□ -0.19
SUPT20H-222	ENST00000495071	CYP3A43	Q9HB55	503 aa		13.89	□□□□□ -0.19

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