RNA–Protein interactions for RNA: ENST00000494728.5

VTI1A-208, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-208ENST00000494728 EPB41P11171 864 aaKnown RBP12.26□□□□□ -0.45
VTI1A-208ENST00000494728 BMP6P22004 513 aa12.26□□□□□ -0.45
VTI1A-208ENST00000494728 GBP1P32455 592 aa12.26□□□□□ -0.45
VTI1A-208ENST00000494728 WASP42768 502 aa12.26□□□□□ -0.45
VTI1A-208ENST00000494728 CREB5Q02930 508 aa12.26□□□□□ -0.45
VTI1A-208ENST00000494728 GAD2Q05329 585 aa12.26□□□□□ -0.45
VTI1A-208ENST00000494728 COBLL1Q53SF7 1204 aa12.26□□□□□ -0.45
VTI1A-208ENST00000494728 C10orf76Q5T2E6 689 aa12.26□□□□□ -0.45
VTI1A-208ENST00000494728 EGFLAMQ63HQ2 1017 aa12.26□□□□□ -0.45
VTI1A-208ENST00000494728 ISM2Q6H9L7 571 aa12.26□□□□□ -0.45
VTI1A-208ENST00000494728 TPGS1Q6ZTW0 290 aa12.26□□□□□ -0.45
VTI1A-208ENST00000494728 CCDC186Q7Z3E2 898 aa12.26□□□□□ -0.45
VTI1A-208ENST00000494728 PIGZQ86VD9 579 aa12.26□□□□□ -0.45
VTI1A-208ENST00000494728 UBR7Q8N806 425 aa12.26□□□□□ -0.45
VTI1A-208ENST00000494728 NDRG1Q92597 394 aaKnown RBP12.26□□□□□ -0.45
VTI1A-208ENST00000494728 SLC35C1Q96A29 364 aa12.26□□□□□ -0.45
VTI1A-208ENST00000494728 ACOX2Q99424 681 aa12.26□□□□□ -0.45
VTI1A-208ENST00000494728 CD248Q9HCU0 757 aa12.26□□□□□ -0.45
VTI1A-208ENST00000494728 CD93Q9NPY3 652 aa12.26□□□□□ -0.45
VTI1A-208ENST00000494728 MBD1Q9UIS9 605 aaPredicted RBP12.26□□□□□ -0.45
VTI1A-208ENST00000494728 NAGPAQ9UK23 515 aa12.26□□□□□ -0.45
VTI1A-208ENST00000494728 TP53BP1Q12888 1972 aaPredicted RBP12.25□□□□□ -0.45
VTI1A-208ENST00000494728 LAMA5O15230 3695 aa12.25□□□□□ -0.45
VTI1A-208ENST00000494728 TCRBV21S2A2A0A5A6 115 aa12.25□□□□□ -0.45
VTI1A-208ENST00000494728 LNP1A1A4G5 178 aa12.25□□□□□ -0.45
VTI1A-208ENST00000494728 BCLAF3A2AJT9 711 aaKnown RBP12.25□□□□□ -0.45
VTI1A-208ENST00000494728 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.25□□□□□ -0.45
VTI1A-208ENST00000494728 CETN3O15182 167 aa12.25□□□□□ -0.45
VTI1A-208ENST00000494728 SLC16A3O15427 465 aaKnown RBP12.25□□□□□ -0.45
VTI1A-208ENST00000494728 CACNG3O60359 315 aa12.25□□□□□ -0.45
VTI1A-208ENST00000494728 TYRP14679 529 aa12.25□□□□□ -0.45
VTI1A-208ENST00000494728 SDHBP21912 280 aa12.25□□□□□ -0.45
VTI1A-208ENST00000494728 ATP5C1P36542 298 aaKnown RBP12.25□□□□□ -0.45
VTI1A-208ENST00000494728 LIMK1P53667 647 aa12.25□□□□□ -0.45
VTI1A-208ENST00000494728 RAB41Q5JT25 222 aa12.25□□□□□ -0.45
VTI1A-208ENST00000494728 C10orf120Q5SQS8 335 aa12.25□□□□□ -0.45
VTI1A-208ENST00000494728 TCERG1LQ5VWI1 586 aa12.25□□□□□ -0.45
VTI1A-208ENST00000494728 ZNF513Q8N8E2 541 aaPredicted RBP12.25□□□□□ -0.45
VTI1A-208ENST00000494728 C12orf50Q8NA57 414 aaPredicted RBP12.25□□□□□ -0.45
VTI1A-208ENST00000494728 HMGB4Q8WW32 186 aa12.25□□□□□ -0.45
VTI1A-208ENST00000494728 KAT5Q92993 513 aa12.25□□□□□ -0.45
VTI1A-208ENST00000494728 HEXIM2Q96MH2 286 aaKnown RBP12.25□□□□□ -0.45
VTI1A-208ENST00000494728 DNAJC17Q9NVM6 304 aaKnown RBP12.25□□□□□ -0.45
VTI1A-208ENST00000494728 PLK2Q9NYY3 685 aa12.25□□□□□ -0.45
VTI1A-208ENST00000494728 MARK1Q9P0L2 795 aa12.25□□□□□ -0.45
VTI1A-208ENST00000494728 DEC1Q9P2X7 70 aa12.25□□□□□ -0.45
VTI1A-208ENST00000494728 COQ4Q9Y3A0 265 aa12.25□□□□□ -0.45
VTI1A-208ENST00000494728 PCDHGA5Q9Y5G8 931 aa12.25□□□□□ -0.45
VTI1A-208ENST00000494728 DMXL2Q8TDJ6 3036 aa12.25□□□□□ -0.45
VTI1A-208ENST00000494728 A0A1W2PQF6 199 aa12.24□□□□□ -0.45
VTI1A-208ENST00000494728 TBC1D3BA6NDS4 549 aa12.24□□□□□ -0.45
VTI1A-208ENST00000494728 CALCAP01258 141 aa12.24□□□□□ -0.45
VTI1A-208ENST00000494728 HMBSP08397 361 aa12.24□□□□□ -0.45
VTI1A-208ENST00000494728 ADRB1P08588 477 aa12.24□□□□□ -0.45
VTI1A-208ENST00000494728 DSPP15924 2871 aaKnown RBP12.24□□□□□ -0.45
VTI1A-208ENST00000494728 GABRG2P18507 467 aa12.24□□□□□ -0.45
VTI1A-208ENST00000494728 P2RY2P41231 377 aa12.24□□□□□ -0.45
VTI1A-208ENST00000494728 PTGER3P43115 390 aa12.24□□□□□ -0.45
VTI1A-208ENST00000494728 TNFRSF4P43489 277 aa12.24□□□□□ -0.45
VTI1A-208ENST00000494728 LRMPQ12912 555 aa12.24□□□□□ -0.45
VTI1A-208ENST00000494728 CUL2Q13617 745 aa12.24□□□□□ -0.45
VTI1A-208ENST00000494728 ELF2Q15723 593 aa12.24□□□□□ -0.45
VTI1A-208ENST00000494728 GOLGA7BQ2TAP0 167 aa12.24□□□□□ -0.45
VTI1A-208ENST00000494728 MAP7D1Q3KQU3 841 aa12.24□□□□□ -0.45
VTI1A-208ENST00000494728 STPG1Q5TH74 334 aa12.24□□□□□ -0.45
VTI1A-208ENST00000494728 ARHGAP17Q68EM7 881 aa12.24□□□□□ -0.45
VTI1A-208ENST00000494728 GRAMD4Q6IC98 578 aa12.24□□□□□ -0.45
VTI1A-208ENST00000494728 KIAA1211LQ6NV74 962 aa12.24□□□□□ -0.45
VTI1A-208ENST00000494728 KLHDC10Q6PID8 442 aa12.24□□□□□ -0.45
VTI1A-208ENST00000494728 ARMCX6Q7L4S7 300 aa12.24□□□□□ -0.45
VTI1A-208ENST00000494728 CCDC150Q8NCX0 1101 aa12.24□□□□□ -0.45
VTI1A-208ENST00000494728 TMEM176AQ96HP8 235 aa12.24□□□□□ -0.45
VTI1A-208ENST00000494728 CNTNAP3BQ96NU0 1288 aa12.24□□□□□ -0.45
VTI1A-208ENST00000494728 GSDMAQ96QA5 445 aa12.24□□□□□ -0.45
VTI1A-208ENST00000494728 ATXN2Q99700 1313 aaKnown RBP12.24□□□□□ -0.45
VTI1A-208ENST00000494728 ZSWIM1Q9BR11 485 aa12.24□□□□□ -0.45
VTI1A-208ENST00000494728 EDEM2Q9BV94 578 aa12.24□□□□□ -0.45
VTI1A-208ENST00000494728 BBS2Q9BXC9 721 aa12.24□□□□□ -0.45
VTI1A-208ENST00000494728 CNTNAP3Q9BZ76 1288 aa12.24□□□□□ -0.45
VTI1A-208ENST00000494728 SLC6A17Q9H1V8 727 aa12.24□□□□□ -0.45
VTI1A-208ENST00000494728 VPS45Q9NRW7 570 aa12.24□□□□□ -0.45
VTI1A-208ENST00000494728 RMND1Q9NWS8 449 aa12.24□□□□□ -0.45
VTI1A-208ENST00000494728 RASAL2Q9UJF2 1139 aa12.24□□□□□ -0.45
VTI1A-208ENST00000494728 DNMT3LQ9UJW3 386 aa12.24□□□□□ -0.45
VTI1A-208ENST00000494728 MAN1B1Q9UKM7 699 aa12.24□□□□□ -0.45
VTI1A-208ENST00000494728 TSPAN16Q9UKR8 245 aa12.24□□□□□ -0.45
VTI1A-208ENST00000494728 ZFYVE26Q68DK2 2539 aa12.24□□□□□ -0.45
VTI1A-208ENST00000494728 KNL1Q8NG31 2342 aa12.23□□□□□ -0.45
VTI1A-208ENST00000494728 CELSR3Q9NYQ7 3312 aa12.23□□□□□ -0.45
VTI1A-208ENST00000494728 GADD45BO75293 160 aaPredicted RBP12.23□□□□□ -0.45
VTI1A-208ENST00000494728 GABBR2O75899 941 aa12.23□□□□□ -0.45
VTI1A-208ENST00000494728 CAVIN2O95810 425 aa12.23□□□□□ -0.45
VTI1A-208ENST00000494728 CISD3P0C7P0 127 aa12.23□□□□□ -0.45
VTI1A-208ENST00000494728 HOXB2P14652 356 aa12.23□□□□□ -0.45
VTI1A-208ENST00000494728 LRRC63Q05C16 580 aa12.23□□□□□ -0.45
VTI1A-208ENST00000494728 PDE4CQ08493 712 aa12.23□□□□□ -0.45
VTI1A-208ENST00000494728 EFEMP1Q12805 493 aa12.23□□□□□ -0.45
VTI1A-208ENST00000494728 USP39Q53GS9 565 aaKnown RBP12.23□□□□□ -0.45
VTI1A-208ENST00000494728 EOGTQ5NDL2 527 aa12.23□□□□□ -0.45
VTI1A-208ENST00000494728 FYB2Q5VWT5 728 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms