RNA–Protein interactions for RNA: ENST00000494667.5

PRKD3-210, Transcript of protein kinase D3, humanhuman

TSL 1 (best)

Gene PRKD3, Length 4,326 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-210ENST00000494667 LILRA2Q8N149 483 aa4.96□□□□□ -1.62
PRKD3-210ENST00000494667 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.96□□□□□ -1.62
PRKD3-210ENST00000494667 CABLES1Q8TDN4 633 aa4.96□□□□□ -1.62
PRKD3-210ENST00000494667 TBCKQ8TEA7 893 aa4.96□□□□□ -1.62
PRKD3-210ENST00000494667 SORT1Q99523 831 aa4.96□□□□□ -1.62
PRKD3-210ENST00000494667 SERPINI1Q99574 410 aa4.96□□□□□ -1.62
PRKD3-210ENST00000494667 DHRS9Q9BPW9 319 aa4.96□□□□□ -1.62
PRKD3-210ENST00000494667 HERPUD2Q9BSE4 406 aa4.96□□□□□ -1.62
PRKD3-210ENST00000494667 PAIP1Q9H074 479 aaKnown RBP4.96□□□□□ -1.62
PRKD3-210ENST00000494667 ZNF385DQ9H6B1 395 aa4.96□□□□□ -1.62
PRKD3-210ENST00000494667 PPARGC1AQ9UBK2 798 aaKnown RBP4.96□□□□□ -1.62
PRKD3-210ENST00000494667 EBF1Q9UH73 591 aa4.96□□□□□ -1.62
PRKD3-210ENST00000494667 CNTNAP2Q9UHC6 1331 aa4.96□□□□□ -1.62
PRKD3-210ENST00000494667 SUGT1Q9Y2Z0 365 aa4.96□□□□□ -1.62
PRKD3-210ENST00000494667 SIPA1L1O43166 1804 aa4.96□□□□□ -1.62
PRKD3-210ENST00000494667 EMSYQ7Z589 1322 aa4.96□□□□□ -1.62
PRKD3-210ENST00000494667 NOTOA8MTQ0 251 aa4.96□□□□□ -1.62
PRKD3-210ENST00000494667 ACOT8O14734 319 aa4.96□□□□□ -1.62
PRKD3-210ENST00000494667 KRT18P05783 430 aaKnown RBP4.96□□□□□ -1.62
PRKD3-210ENST00000494667 KCNA2P16389 499 aa4.96□□□□□ -1.62
PRKD3-210ENST00000494667 BGNP21810 368 aa4.96□□□□□ -1.62
PRKD3-210ENST00000494667 RPA1P27694 616 aa4.96□□□□□ -1.62
PRKD3-210ENST00000494667 POLR2BP30876 1174 aaKnown RBP4.96□□□□□ -1.62
PRKD3-210ENST00000494667 CIITAP33076 1130 aa4.96□□□□□ -1.62
PRKD3-210ENST00000494667 TRPC3Q13507 836 aa4.96□□□□□ -1.62
PRKD3-210ENST00000494667 GRAMD1BQ3KR37 738 aa4.96□□□□□ -1.62
PRKD3-210ENST00000494667 NHSL2Q5HYW2 709 aa4.96□□□□□ -1.62
PRKD3-210ENST00000494667 CES4AQ5XG92 561 aa4.96□□□□□ -1.62
PRKD3-210ENST00000494667 LDHAL6AQ6ZMR3 332 aa4.96□□□□□ -1.62
PRKD3-210ENST00000494667 DNAAF5Q86Y56 855 aa4.96□□□□□ -1.62
PRKD3-210ENST00000494667 ANKMY2Q8IV38 441 aa4.96□□□□□ -1.62
PRKD3-210ENST00000494667 NAT8LQ8N9F0 302 aa4.96□□□□□ -1.62
PRKD3-210ENST00000494667 TRAF3IP1Q8TDR0 691 aaPredicted RBP4.96□□□□□ -1.62
PRKD3-210ENST00000494667 TFB1MQ8WVM0 346 aaKnown RBP4.96□□□□□ -1.62
PRKD3-210ENST00000494667 C1orf54Q8WWF1 131 aa4.96□□□□□ -1.62
PRKD3-210ENST00000494667 S100ZQ8WXG8 99 aa4.96□□□□□ -1.62
PRKD3-210ENST00000494667 USP6NLQ92738 828 aa4.96□□□□□ -1.62
PRKD3-210ENST00000494667 TFAP2CQ92754 450 aa4.96□□□□□ -1.62
PRKD3-210ENST00000494667 HAS1Q92839 578 aa4.96□□□□□ -1.62
PRKD3-210ENST00000494667 GPKOWQ92917 476 aaPredicted RBP eCLIP4.96□□□□□ -1.62
PRKD3-210ENST00000494667 TMIGD2Q96BF3 282 aa4.96□□□□□ -1.62
PRKD3-210ENST00000494667 SNX18Q96RF0 628 aa4.96□□□□□ -1.62
PRKD3-210ENST00000494667 WDR83Q9BRX9 315 aaKnown RBP4.96□□□□□ -1.62
PRKD3-210ENST00000494667 NDEL1Q9GZM8 345 aa4.96□□□□□ -1.62
PRKD3-210ENST00000494667 ADAMTS10Q9H324 1103 aa4.96□□□□□ -1.62
PRKD3-210ENST00000494667 RIOX1Q9H6W3 641 aa4.96□□□□□ -1.62
PRKD3-210ENST00000494667 CD320Q9NPF0 282 aa4.96□□□□□ -1.62
PRKD3-210ENST00000494667 FBXO8Q9NRD0 319 aa4.96□□□□□ -1.62
PRKD3-210ENST00000494667 PRELID1Q9Y255 219 aa4.96□□□□□ -1.62
PRKD3-210ENST00000494667 UGT2A1Q9Y4X1 527 aa4.96□□□□□ -1.62
PRKD3-210ENST00000494667 TLL2Q9Y6L7 1015 aa4.96□□□□□ -1.62
PRKD3-210ENST00000494667 UBAP1LF5GYI3 381 aa4.96□□□□□ -1.62
PRKD3-210ENST00000494667 TGFB1I1O43294 461 aa4.96□□□□□ -1.62
PRKD3-210ENST00000494667 CLPXO76031 633 aa4.96□□□□□ -1.62
PRKD3-210ENST00000494667 NAGAP17050 411 aa4.96□□□□□ -1.62
PRKD3-210ENST00000494667 GLRA2P23416 452 aa4.96□□□□□ -1.62
PRKD3-210ENST00000494667 PCYT1AP49585 367 aa4.96□□□□□ -1.62
PRKD3-210ENST00000494667 NLRP11P59045 1033 aaKnown RBP4.96□□□□□ -1.62
PRKD3-210ENST00000494667 NFATC3Q12968 1075 aa4.96□□□□□ -1.62
PRKD3-210ENST00000494667 PPIL2Q13356 520 aa4.96□□□□□ -1.62
PRKD3-210ENST00000494667 CYTH1Q15438 398 aa4.96□□□□□ -1.62
PRKD3-210ENST00000494667 PTPROQ16827 1216 aa4.96□□□□□ -1.62
PRKD3-210ENST00000494667 MGAT5BQ3V5L5 792 aa4.96□□□□□ -1.62
PRKD3-210ENST00000494667 TBC1D10BQ4KMP7 808 aaPredicted RBP4.96□□□□□ -1.62
PRKD3-210ENST00000494667 INTS11Q5TA45 600 aaKnown RBP4.96□□□□□ -1.62
PRKD3-210ENST00000494667 C16orf89Q6UX73 402 aa4.96□□□□□ -1.62
PRKD3-210ENST00000494667 CYS1Q717R9 158 aa4.96□□□□□ -1.62
PRKD3-210ENST00000494667 TFAP2DQ7Z6R9 452 aa4.96□□□□□ -1.62
PRKD3-210ENST00000494667 ADGRA1Q86SQ6 560 aa4.96□□□□□ -1.62
PRKD3-210ENST00000494667 SETD3Q86TU7 594 aaPredicted RBP4.96□□□□□ -1.62
PRKD3-210ENST00000494667 IGFN1Q86VF2 1251 aa4.96□□□□□ -1.62
PRKD3-210ENST00000494667 CRLF3Q8IUI8 442 aa4.96□□□□□ -1.62
PRKD3-210ENST00000494667 TRIML2Q8N7C3 387 aa4.96□□□□□ -1.62
PRKD3-210ENST00000494667 POU5F2Q8N7G0 328 aa4.96□□□□□ -1.62
PRKD3-210ENST00000494667 SIMC1Q8NDZ2 872 aa4.96□□□□□ -1.62
PRKD3-210ENST00000494667 OR13F1Q8NGS4 319 aa4.96□□□□□ -1.62
PRKD3-210ENST00000494667 E2F7Q96AV8 911 aa4.96□□□□□ -1.62
PRKD3-210ENST00000494667 PCDHB18PQ96TA0 734 aa4.96□□□□□ -1.62
PRKD3-210ENST00000494667 TCF12Q99081 682 aa4.96□□□□□ -1.62
PRKD3-210ENST00000494667 NUP85Q9BW27 656 aa4.96□□□□□ -1.62
PRKD3-210ENST00000494667 FRMD8Q9BZ67 464 aaPredicted RBP4.96□□□□□ -1.62
PRKD3-210ENST00000494667 OR2B2Q9GZK3 357 aa4.96□□□□□ -1.62
PRKD3-210ENST00000494667 SMARCAD1Q9H4L7 1026 aa4.96□□□□□ -1.62
PRKD3-210ENST00000494667 NANOGQ9H9S0 305 aa4.96□□□□□ -1.62
PRKD3-210ENST00000494667 ANKHQ9HCJ1 492 aa4.96□□□□□ -1.62
PRKD3-210ENST00000494667 GPRC5DQ9NZD1 345 aa4.96□□□□□ -1.62
PRKD3-210ENST00000494667 SEL1LQ9UBV2 794 aa4.96□□□□□ -1.62
PRKD3-210ENST00000494667 SARDHQ9UL12 918 aa4.96□□□□□ -1.62
PRKD3-210ENST00000494667 PCDHA12Q9UN75 941 aa4.96□□□□□ -1.62
PRKD3-210ENST00000494667 ARHGAP26Q9UNA1 814 aa4.96□□□□□ -1.62
PRKD3-210ENST00000494667 ISPDA4D126 451 aa4.95□□□□□ -1.62
PRKD3-210ENST00000494667 ZNF839A8K0R7 811 aa4.95□□□□□ -1.62
PRKD3-210ENST00000494667 TBX3O15119 743 aa4.95□□□□□ -1.62
PRKD3-210ENST00000494667 SLC37A4O43826 429 aa4.95□□□□□ -1.62
PRKD3-210ENST00000494667 GRIN3BO60391 1043 aa4.95□□□□□ -1.62
PRKD3-210ENST00000494667 B4GALT4O60513 344 aa4.95□□□□□ -1.62
PRKD3-210ENST00000494667 SEC14L2O76054 403 aa4.95□□□□□ -1.62
PRKD3-210ENST00000494667 BPGMP07738 259 aa4.95□□□□□ -1.62
PRKD3-210ENST00000494667 ATP6V1B1P15313 513 aa4.95□□□□□ -1.62
PRKD3-210ENST00000494667 CXCR2P25025 360 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms