RNA–Protein interactions for RNA: ENST00000494654.1

MDC1-208, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-208ENST00000494654 RPAP3Q9H6T3 665 aaPredicted RBP2.83□□□□□ -1.96
MDC1-208ENST00000494654 LRRC19Q9H756 370 aa2.83□□□□□ -1.96
MDC1-208ENST00000494654 CAAP1Q9H8G2 361 aa2.83□□□□□ -1.96
MDC1-208ENST00000494654 SH3GLB2Q9NR46 395 aa2.83□□□□□ -1.96
MDC1-208ENST00000494654 PNPLA3Q9NST1 481 aa2.83□□□□□ -1.96
MDC1-208ENST00000494654 NDFIP2Q9NV92 336 aa2.83□□□□□ -1.96
MDC1-208ENST00000494654 DNAJC17Q9NVM6 304 aaKnown RBP2.83□□□□□ -1.96
MDC1-208ENST00000494654 THG1LQ9NWX6 298 aaKnown RBP2.83□□□□□ -1.96
MDC1-208ENST00000494654 MKS1Q9NXB0 559 aa2.83□□□□□ -1.96
MDC1-208ENST00000494654 KCNK4Q9NYG8 393 aa2.83□□□□□ -1.96
MDC1-208ENST00000494654 PSMC3IPQ9P2W1 217 aaPredicted RBP2.83□□□□□ -1.96
MDC1-208ENST00000494654 RABL2AQ9UBK7 228 aaPredicted RBP2.83□□□□□ -1.96
MDC1-208ENST00000494654 HEY2Q9UBP5 337 aa2.83□□□□□ -1.96
MDC1-208ENST00000494654 SEL1LQ9UBV2 794 aa2.83□□□□□ -1.96
MDC1-208ENST00000494654 ADAMTS1Q9UHI8 967 aa2.83□□□□□ -1.96
MDC1-208ENST00000494654 RIMS3Q9UJD0 308 aa2.83□□□□□ -1.96
MDC1-208ENST00000494654 ADAMTS6Q9UKP5 1117 aa2.83□□□□□ -1.96
MDC1-208ENST00000494654 ITGA11Q9UKX5 1188 aa2.83□□□□□ -1.96
MDC1-208ENST00000494654 PCDHA4Q9UN74 947 aa2.83□□□□□ -1.96
MDC1-208ENST00000494654 SORCS3Q9UPU3 1222 aa2.83□□□□□ -1.96
MDC1-208ENST00000494654 DNM3Q9UQ16 869 aa2.83□□□□□ -1.96
MDC1-208ENST00000494654 ERGIC3Q9Y282 383 aa2.83□□□□□ -1.96
MDC1-208ENST00000494654 ZBTB1Q9Y2K1 713 aa2.83□□□□□ -1.96
MDC1-208ENST00000494654 PPME1Q9Y570 386 aa2.83□□□□□ -1.96
MDC1-208ENST00000494654 MAD1L1Q9Y6D9 718 aa2.83□□□□□ -1.96
MDC1-208ENST00000494654 IKBKGQ9Y6K9 419 aa2.83□□□□□ -1.96
MDC1-208ENST00000494654 SLC4A4Q9Y6R1 1079 aa2.83□□□□□ -1.96
MDC1-208ENST00000494654 ASTN2O75129 1339 aaPredicted RBP2.83□□□□□ -1.96
MDC1-208ENST00000494654 TNKSO95271 1327 aa2.83□□□□□ -1.96
MDC1-208ENST00000494654 FAM205AQ6ZU69 1335 aa2.83□□□□□ -1.96
MDC1-208ENST00000494654 SBF1O95248 1867 aa2.83□□□□□ -1.96
MDC1-208ENST00000494654 DENND4AQ7Z401 1863 aa2.83□□□□□ -1.96
MDC1-208ENST00000494654 TNS2Q63HR2 1409 aa2.83□□□□□ -1.96
MDC1-208ENST00000494654 SSC5DA1L4H1 1573 aa2.83□□□□□ -1.96
MDC1-208ENST00000494654 A0A087WZG4 1122 aa2.82□□□□□ -1.96
MDC1-208ENST00000494654 A0A0G2JND7 137 aa2.82□□□□□ -1.96
MDC1-208ENST00000494654 GOLGA8QA0A0J9YX86 632 aa2.82□□□□□ -1.96
MDC1-208ENST00000494654 TCRBV5S4A2TA0A5A2 114 aa2.82□□□□□ -1.96
MDC1-208ENST00000494654 GTPBP10A4D1E9 387 aaKnown RBP2.82□□□□□ -1.96
MDC1-208ENST00000494654 KRBA1A5PL33 1030 aa2.82□□□□□ -1.96
MDC1-208ENST00000494654 ANKRD62A6NC57 917 aa2.82□□□□□ -1.96
MDC1-208ENST00000494654 FAM172BPA6NC97 362 aa2.82□□□□□ -1.96
MDC1-208ENST00000494654 GOLGA8OA6NCC3 632 aa2.82□□□□□ -1.96
MDC1-208ENST00000494654 ZNF839A8K0R7 811 aa2.82□□□□□ -1.96
MDC1-208ENST00000494654 FAM155AB1AL88 458 aaPredicted RBP2.82□□□□□ -1.96
MDC1-208ENST00000494654 B2RBV5 119 aa2.82□□□□□ -1.96
MDC1-208ENST00000494654 KLRF2D3W0D1 207 aa2.82□□□□□ -1.96
MDC1-208ENST00000494654 GOLGA8NF8WBI6 632 aa2.82□□□□□ -1.96
MDC1-208ENST00000494654 GOLGA8RI6L899 631 aa2.82□□□□□ -1.96
MDC1-208ENST00000494654 M0R2N6 131 aa2.82□□□□□ -1.96
MDC1-208ENST00000494654 TP73O15350 636 aa2.82□□□□□ -1.96
MDC1-208ENST00000494654 SLC16A3O15427 465 aaKnown RBP2.82□□□□□ -1.96
MDC1-208ENST00000494654 CLOCKO15516 846 aa2.82□□□□□ -1.96
MDC1-208ENST00000494654 MSI1O43347 362 aaKnown RBP2.82□□□□□ -1.96
MDC1-208ENST00000494654 SLC26A4O43511 780 aa2.82□□□□□ -1.96
MDC1-208ENST00000494654 SCO2O43819 266 aa2.82□□□□□ -1.96
MDC1-208ENST00000494654 SNAP91O60641 907 aa2.82□□□□□ -1.96
MDC1-208ENST00000494654 NOL3O60936 208 aaKnown RBP2.82□□□□□ -1.96
MDC1-208ENST00000494654 TRPA1O75762 1119 aa2.82□□□□□ -1.96
MDC1-208ENST00000494654 ZBTB11O95625 1053 aaPredicted RBP2.82□□□□□ -1.96
MDC1-208ENST00000494654 STAMBPO95630 424 aa2.82□□□□□ -1.96
MDC1-208ENST00000494654 BAG2O95816 211 aa2.82□□□□□ -1.96
MDC1-208ENST00000494654 CRYZL1O95825 349 aa2.82□□□□□ -1.96
MDC1-208ENST00000494654 CHEK2O96017 543 aa2.82□□□□□ -1.96
MDC1-208ENST00000494654 CAPNS1P04632 268 aa2.82□□□□□ -1.96
MDC1-208ENST00000494654 ENO1P06733 434 aaKnown RBP2.82□□□□□ -1.96
MDC1-208ENST00000494654 LDHBP07195 334 aaKnown RBP2.82□□□□□ -1.96
MDC1-208ENST00000494654 LDHCP07864 332 aa2.82□□□□□ -1.96
MDC1-208ENST00000494654 SERPINA6P08185 405 aa2.82□□□□□ -1.96
MDC1-208ENST00000494654 DLDP09622 509 aaKnown RBP2.82□□□□□ -1.96
MDC1-208ENST00000494654 OR52Z1P0C646 297 aa2.82□□□□□ -1.96
MDC1-208ENST00000494654 POLR2MP0CAP2 368 aa2.82□□□□□ -1.96
MDC1-208ENST00000494654 DHRS4L1P0CG22 281 aa2.82□□□□□ -1.96
MDC1-208ENST00000494654 SRGAP2BP0DMP2 458 aa2.82□□□□□ -1.96
MDC1-208ENST00000494654 FGFR1P11362 822 aa2.82□□□□□ -1.96
MDC1-208ENST00000494654 SCG2P13521 617 aa2.82□□□□□ -1.96
MDC1-208ENST00000494654 ATP6V1B1P15313 513 aa2.82□□□□□ -1.96
MDC1-208ENST00000494654 ATF2P15336 505 aa2.82□□□□□ -1.96
MDC1-208ENST00000494654 UCHL3P15374 230 aa2.82□□□□□ -1.96
MDC1-208ENST00000494654 RAG1P15918 1043 aa2.82□□□□□ -1.96
MDC1-208ENST00000494654 TSHRP16473 764 aa2.82□□□□□ -1.96
MDC1-208ENST00000494654 CTRB1P17538 263 aa2.82□□□□□ -1.96
MDC1-208ENST00000494654 PSMC3P17980 439 aa2.82□□□□□ -1.96
MDC1-208ENST00000494654 AOC1P19801 751 aa2.82□□□□□ -1.96
MDC1-208ENST00000494654 M6PRP20645 277 aa2.82□□□□□ -1.96
MDC1-208ENST00000494654 TCEA1P23193 301 aaKnown RBP2.82□□□□□ -1.96
MDC1-208ENST00000494654 IL4RP24394 825 aa2.82□□□□□ -1.96
MDC1-208ENST00000494654 PON1P27169 355 aa2.82□□□□□ -1.96
MDC1-208ENST00000494654 DCKP27707 260 aa2.82□□□□□ -1.96
MDC1-208ENST00000494654 PKLRP30613 574 aa2.82□□□□□ -1.96
MDC1-208ENST00000494654 CIITAP33076 1130 aa2.82□□□□□ -1.96
MDC1-208ENST00000494654 MCM7P33993 719 aa2.82□□□□□ -1.96
MDC1-208ENST00000494654 HOXD13P35453 343 aa2.82□□□□□ -1.96
MDC1-208ENST00000494654 CPOXP36551 454 aa2.82□□□□□ -1.96
MDC1-208ENST00000494654 GNL1P36915 607 aaPredicted RBP2.82□□□□□ -1.96
MDC1-208ENST00000494654 SLC1A1P43005 524 aa2.82□□□□□ -1.96
MDC1-208ENST00000494654 ZAP70P43403 619 aa2.82□□□□□ -1.96
MDC1-208ENST00000494654 STT3AP46977 705 aa2.82□□□□□ -1.96
MDC1-208ENST00000494654 ALDH1A3P47895 512 aa2.82□□□□□ -1.96
MDC1-208ENST00000494654 NT5C2P49902 561 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms