RNA–Protein interactions for RNA: ENST00000494243.5

TTC3-224, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 861 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-224ENST00000494243 TPGS1Q6ZTW0 290 aa25.16■■□□□ 1.62
TTC3-224ENST00000494243 NUDT18Q6ZVK8 323 aa25.16■■□□□ 1.62
TTC3-224ENST00000494243 TRMT11Q7Z4G4 463 aaKnown RBP25.16■■□□□ 1.62
TTC3-224ENST00000494243 PGBD3Q8N328 593 aa25.16■■□□□ 1.62
TTC3-224ENST00000494243 ZNF276Q8N554 614 aa25.16■■□□□ 1.62
TTC3-224ENST00000494243 P2RY11Q96G91 374 aa25.16■■□□□ 1.62
TTC3-224ENST00000494243 SPACA7Q96KW9 195 aa25.16■■□□□ 1.62
TTC3-224ENST00000494243 ACOX2Q99424 681 aa25.16■■□□□ 1.62
TTC3-224ENST00000494243 SCAND2PQ9GZW5 306 aaPredicted RBP25.16■■□□□ 1.62
TTC3-224ENST00000494243 CD248Q9HCU0 757 aa25.16■■□□□ 1.62
TTC3-224ENST00000494243 TMEM74BQ9NUR3 256 aa25.16■■□□□ 1.62
TTC3-224ENST00000494243 WDR35Q9P2L0 1181 aa25.16■■□□□ 1.62
TTC3-224ENST00000494243 DNMT3LQ9UJW3 386 aa25.16■■□□□ 1.62
TTC3-224ENST00000494243 ANGPTL2Q9UKU9 493 aa25.16■■□□□ 1.62
TTC3-224ENST00000494243 USP3Q9Y6I4 520 aa25.16■■□□□ 1.62
TTC3-224ENST00000494243 TNRC6BQ9UPQ9 1833 aaKnown RBP25.15■■□□□ 1.62
TTC3-224ENST00000494243 PRRT4C9JH25 899 aa25.15■■□□□ 1.62
TTC3-224ENST00000494243 NTSR1P30989 418 aa25.15■■□□□ 1.62
TTC3-224ENST00000494243 GTF2H1P32780 548 aa25.15■■□□□ 1.62
TTC3-224ENST00000494243 WASP42768 502 aa25.15■■□□□ 1.62
TTC3-224ENST00000494243 SHC2P98077 582 aa25.15■■□□□ 1.62
TTC3-224ENST00000494243 GOLGA8FQ08AF8 430 aa25.15■■□□□ 1.62
TTC3-224ENST00000494243 GOLGA8DPQ0D2H9 430 aa25.15■■□□□ 1.62
TTC3-224ENST00000494243 SPDYCQ5MJ68 293 aa25.15■■□□□ 1.62
TTC3-224ENST00000494243 KRT39Q6A163 491 aa25.15■■□□□ 1.62
TTC3-224ENST00000494243 PSAPL1Q6NUJ1 521 aa25.15■■□□□ 1.62
TTC3-224ENST00000494243 TOGARAM2Q6ZUX3 1019 aa25.15■■□□□ 1.62
TTC3-224ENST00000494243 ARMCX6Q7L4S7 300 aa25.15■■□□□ 1.62
TTC3-224ENST00000494243 CCDC186Q7Z3E2 898 aa25.15■■□□□ 1.62
TTC3-224ENST00000494243 EEF2KMTQ96G04 330 aa25.15■■□□□ 1.62
TTC3-224ENST00000494243 EVLQ9UI08 416 aaPredicted RBP25.15■■□□□ 1.62
TTC3-224ENST00000494243 LSM7Q9UK45 103 aaKnown RBP25.15■■□□□ 1.62
TTC3-224ENST00000494243 CACNA1BQ00975 2339 aa25.15■■□□□ 1.62
TTC3-224ENST00000494243 GIPC1O14908 333 aa25.14■■□□□ 1.62
TTC3-224ENST00000494243 STC2O76061 302 aa25.14■■□□□ 1.62
TTC3-224ENST00000494243 CISD3P0C7P0 127 aa25.14■■□□□ 1.62
TTC3-224ENST00000494243 HOXB2P14652 356 aa25.14■■□□□ 1.62
TTC3-224ENST00000494243 BYSLQ13895 437 aaKnown RBP25.14■■□□□ 1.62
TTC3-224ENST00000494243 EDRF1Q3B7T1 1238 aa25.14■■□□□ 1.62
TTC3-224ENST00000494243 ZNF394Q53GI3 561 aa25.14■■□□□ 1.62
TTC3-224ENST00000494243 C10orf120Q5SQS8 335 aa25.14■■□□□ 1.62
TTC3-224ENST00000494243 DAB2IPQ5VWQ8 1189 aa25.14■■□□□ 1.62
TTC3-224ENST00000494243 SMYD4Q8IYR2 804 aaPredicted RBP25.14■■□□□ 1.62
TTC3-224ENST00000494243 CCDC150Q8NCX0 1101 aa25.14■■□□□ 1.62
TTC3-224ENST00000494243 XPO6Q96QU8 1125 aaKnown RBP25.14■■□□□ 1.62
TTC3-224ENST00000494243 TMEM9BQ9NQ34 198 aa25.14■■□□□ 1.62
TTC3-224ENST00000494243 NAGPAQ9UK23 515 aa25.14■■□□□ 1.62
TTC3-224ENST00000494243 CHD8Q9HCK8 2581 aa25.14■■□□□ 1.61
TTC3-224ENST00000494243 KLKB1P03952 638 aa25.13■■□□□ 1.61
TTC3-224ENST00000494243 PSEN1P49768 467 aa25.13■■□□□ 1.61
TTC3-224ENST00000494243 SYT12Q8IV01 421 aa25.13■■□□□ 1.61
TTC3-224ENST00000494243 SLC4A11Q8NBS3 891 aa25.13■■□□□ 1.61
TTC3-224ENST00000494243 FAXDC2Q96IV6 333 aa25.13■■□□□ 1.61
TTC3-224ENST00000494243 HEXIM2Q96MH2 286 aaKnown RBP25.13■■□□□ 1.61
TTC3-224ENST00000494243 CLIC5Q9NZA1 410 aa25.13■■□□□ 1.61
TTC3-224ENST00000494243 NOVA1P51513 510 aaKnown RBP25.12■■□□□ 1.61
TTC3-224ENST00000494243 RAD23BP54727 409 aa25.12■■□□□ 1.61
TTC3-224ENST00000494243 ST3GAL2Q16842 350 aa25.12■■□□□ 1.61
TTC3-224ENST00000494243 TRIM61Q5EBN2 209 aa25.12■■□□□ 1.61
TTC3-224ENST00000494243 FBXL13Q8NEE6 735 aa25.12■■□□□ 1.61
TTC3-224ENST00000494243 ARID3AQ99856 593 aa25.12■■□□□ 1.61
TTC3-224ENST00000494243 GABRG3Q99928 467 aa25.12■■□□□ 1.61
TTC3-224ENST00000494243 GDPD2Q9HCC8 539 aa25.12■■□□□ 1.61
TTC3-224ENST00000494243 CISHQ9NSE2 258 aa25.12■■□□□ 1.61
TTC3-224ENST00000494243 RAB20Q9NX57 234 aa25.12■■□□□ 1.61
TTC3-224ENST00000494243 CALCOCO1Q9P1Z2 691 aa25.12■■□□□ 1.61
TTC3-224ENST00000494243 FBXO10Q9UK96 956 aa25.12■■□□□ 1.61
TTC3-224ENST00000494243 ATP6V1DQ9Y5K8 247 aa25.12■■□□□ 1.61
TTC3-224ENST00000494243 MAP1BP46821 2468 aaKnown RBP25.12■■□□□ 1.61
TTC3-224ENST00000494243 DGKGP49619 791 aa25.11■■□□□ 1.61
TTC3-224ENST00000494243 MXI1P50539 228 aa25.11■■□□□ 1.61
TTC3-224ENST00000494243 PEAR1Q5VY43 1037 aaPredicted RBP25.11■■□□□ 1.61
TTC3-224ENST00000494243 LYSMD4Q5XG99 296 aa25.11■■□□□ 1.61
TTC3-224ENST00000494243 KIAA1211LQ6NV74 962 aa25.11■■□□□ 1.61
TTC3-224ENST00000494243 CHPFQ8IZ52 775 aa25.11■■□□□ 1.61
TTC3-224ENST00000494243 TATDN2Q93075 761 aa25.11■■□□□ 1.61
TTC3-224ENST00000494243 BHMTQ93088 406 aa25.11■■□□□ 1.61
TTC3-224ENST00000494243 TMEM176AQ96HP8 235 aa25.11■■□□□ 1.61
TTC3-224ENST00000494243 UBXN6Q9BZV1 441 aa25.11■■□□□ 1.61
TTC3-224ENST00000494243 DNAI2Q9GZS0 605 aa25.11■■□□□ 1.61
TTC3-224ENST00000494243 PLK2Q9NYY3 685 aa25.11■■□□□ 1.61
TTC3-224ENST00000494243 PILRBQ9UKJ0 227 aa25.11■■□□□ 1.61
TTC3-224ENST00000494243 RALAP11233 206 aa25.1■■□□□ 1.61
TTC3-224ENST00000494243 ITPKAP23677 461 aa25.1■■□□□ 1.61
TTC3-224ENST00000494243 SH3PXD2AQ5TCZ1 1133 aa25.1■■□□□ 1.61
TTC3-224ENST00000494243 TTC39CQ8N584 583 aa25.1■■□□□ 1.61
TTC3-224ENST00000494243 DEFB119Q8N690 84 aa25.1■■□□□ 1.61
TTC3-224ENST00000494243 IPO4Q8TEX9 1081 aaKnown RBP25.1■■□□□ 1.61
TTC3-224ENST00000494243 NDUFV2P19404 249 aa25.09■■□□□ 1.61
TTC3-224ENST00000494243 CSRP1P21291 193 aaKnown RBP25.09■■□□□ 1.61
TTC3-224ENST00000494243 LMAN2Q12907 356 aa25.09■■□□□ 1.61
TTC3-224ENST00000494243 PNOCQ13519 176 aa25.09■■□□□ 1.61
TTC3-224ENST00000494243 RAB41Q5JT25 222 aa25.09■■□□□ 1.61
TTC3-224ENST00000494243 ARHGAP17Q68EM7 881 aa25.09■■□□□ 1.61
TTC3-224ENST00000494243 SDE2Q6IQ49 451 aa25.09■■□□□ 1.61
TTC3-224ENST00000494243 SLC23A3Q6PIS1 610 aa25.09■■□□□ 1.61
TTC3-224ENST00000494243 TADA2BQ86TJ2 420 aa25.09■■□□□ 1.61
TTC3-224ENST00000494243 PIGZQ86VD9 579 aa25.09■■□□□ 1.61
TTC3-224ENST00000494243 ERLEC1Q96DZ1 483 aa25.09■■□□□ 1.61
TTC3-224ENST00000494243 ATXN2Q99700 1313 aaKnown RBP25.09■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms