RNA–Protein interactions for RNA: ENST00000494090.6

COL27A1-207, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 5,329 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-207ENST00000494090 AVPR1AP37288 418 aa19.72■□□□□ 0.75
COL27A1-207ENST00000494090 RARRES1P49788 294 aa19.72■□□□□ 0.75
COL27A1-207ENST00000494090 KRT78Q8N1N4 520 aa19.72■□□□□ 0.75
COL27A1-207ENST00000494090 DIS3LQ8TF46 1054 aaKnown RBP19.72■□□□□ 0.75
COL27A1-207ENST00000494090 IL1RAPL1Q9NZN1 696 aa19.72■□□□□ 0.75
COL27A1-207ENST00000494090 NDUFA13Q9P0J0 144 aa19.72■□□□□ 0.75
COL27A1-207ENST00000494090 FRMPD4Q14CM0 1322 aa19.72■□□□□ 0.75
COL27A1-207ENST00000494090 ZSCAN5CA6NGD5 496 aaPredicted RBP19.72■□□□□ 0.75
COL27A1-207ENST00000494090 ALBP02768 609 aa19.72■□□□□ 0.75
COL27A1-207ENST00000494090 FAM153BP0C7A2 387 aa19.72■□□□□ 0.75
COL27A1-207ENST00000494090 BST2Q10589 180 aaKnown RBP19.72■□□□□ 0.75
COL27A1-207ENST00000494090 PGM5Q15124 567 aa19.72■□□□□ 0.75
COL27A1-207ENST00000494090 FAM153CQ494X1 144 aa19.72■□□□□ 0.75
COL27A1-207ENST00000494090 TTC33Q6PID6 262 aaPredicted RBP19.72■□□□□ 0.75
COL27A1-207ENST00000494090 BNC2Q6ZN30 1099 aaPredicted RBP19.72■□□□□ 0.75
COL27A1-207ENST00000494090 DDI1Q8WTU0 396 aa19.72■□□□□ 0.75
COL27A1-207ENST00000494090 IARS2Q9NSE4 1012 aaKnown RBP19.72■□□□□ 0.75
COL27A1-207ENST00000494090 FAM153AQ9UHL3 310 aa19.72■□□□□ 0.75
COL27A1-207ENST00000494090 SNTNA6NMZ2 147 aa19.71■□□□□ 0.75
COL27A1-207ENST00000494090 RBP1P09455 135 aa19.71■□□□□ 0.75
COL27A1-207ENST00000494090 BGNP21810 368 aa19.71■□□□□ 0.75
COL27A1-207ENST00000494090 EIF1ADQ8N9N8 165 aaKnown RBP19.71■□□□□ 0.75
COL27A1-207ENST00000494090 ADGRE3Q9BY15 652 aa19.71■□□□□ 0.75
COL27A1-207ENST00000494090 CLPBQ9H078 707 aa19.71■□□□□ 0.75
COL27A1-207ENST00000494090 FAM86B1E9PN63 330 aa19.71■□□□□ 0.75
COL27A1-207ENST00000494090 SASH3O75995 380 aa19.71■□□□□ 0.75
COL27A1-207ENST00000494090 FAM86B2P0C5J1 330 aa19.71■□□□□ 0.75
COL27A1-207ENST00000494090 SOX11P35716 441 aa19.71■□□□□ 0.75
COL27A1-207ENST00000494090 MRPL28Q13084 256 aaKnown RBP19.71■□□□□ 0.75
COL27A1-207ENST00000494090 CAMK2GQ13555 558 aaPredicted RBP19.71■□□□□ 0.75
COL27A1-207ENST00000494090 ERAP2Q6P179 960 aa19.71■□□□□ 0.75
COL27A1-207ENST00000494090 SERBP1Q8NC51 408 aaKnown RBP eCLIP19.71■□□□□ 0.75
COL27A1-207ENST00000494090 RAD54BQ9Y620 910 aa19.71■□□□□ 0.75
COL27A1-207ENST00000494090 RGL2O15211 777 aa19.71■□□□□ 0.75
COL27A1-207ENST00000494090 DYRK3O43781 588 aa19.71■□□□□ 0.75
COL27A1-207ENST00000494090 SKAP2O75563 359 aaPredicted RBP19.71■□□□□ 0.75
COL27A1-207ENST00000494090 PYGMP11217 842 aa19.71■□□□□ 0.75
COL27A1-207ENST00000494090 CRYMQ14894 314 aa19.71■□□□□ 0.75
COL27A1-207ENST00000494090 STRA8Q7Z7C7 330 aa19.71■□□□□ 0.75
COL27A1-207ENST00000494090 EMC1Q8N766 993 aa19.71■□□□□ 0.75
COL27A1-207ENST00000494090 ZNF333Q96JL9 665 aa19.71■□□□□ 0.75
COL27A1-207ENST00000494090 GANQ9H2C0 597 aa19.71■□□□□ 0.75
COL27A1-207ENST00000494090 PDGFCQ9NRA1 345 aa19.71■□□□□ 0.75
COL27A1-207ENST00000494090 MIB1Q86YT6 1006 aa19.71■□□□□ 0.75
COL27A1-207ENST00000494090 CNBD2Q96M20 576 aa19.71■□□□□ 0.75
COL27A1-207ENST00000494090 ENTPD7Q9NQZ7 604 aa19.71■□□□□ 0.75
COL27A1-207ENST00000494090 ATP11BQ9Y2G3 1177 aa19.71■□□□□ 0.75
COL27A1-207ENST00000494090 RHOCP08134 193 aa19.7■□□□□ 0.74
COL27A1-207ENST00000494090 IMPDH2P12268 514 aa19.7■□□□□ 0.74
COL27A1-207ENST00000494090 CPA3P15088 417 aa19.7■□□□□ 0.74
COL27A1-207ENST00000494090 YY1P25490 414 aa19.7■□□□□ 0.74
COL27A1-207ENST00000494090 ADRM1Q16186 407 aa19.7■□□□□ 0.74
COL27A1-207ENST00000494090 VPS50Q96JG6 964 aa19.7■□□□□ 0.74
COL27A1-207ENST00000494090 CAAP1Q9H8G2 361 aa19.7■□□□□ 0.74
COL27A1-207ENST00000494090 COPS7BQ9H9Q2 264 aaPredicted RBP19.7■□□□□ 0.74
COL27A1-207ENST00000494090 NMRK2Q9NPI5 230 aa19.7■□□□□ 0.74
COL27A1-207ENST00000494090 AVENQ9NQS1 362 aaPredicted RBP19.7■□□□□ 0.74
COL27A1-207ENST00000494090 COPG1Q9Y678 874 aaKnown RBP19.7■□□□□ 0.74
COL27A1-207ENST00000494090 A0A1B0GW55 424 aa19.7■□□□□ 0.74
COL27A1-207ENST00000494090 ATP6V1G2O95670 118 aa19.7■□□□□ 0.74
COL27A1-207ENST00000494090 DUX4L2P0CJ85 424 aa19.7■□□□□ 0.74
COL27A1-207ENST00000494090 DUX4L3P0CJ86 424 aa19.7■□□□□ 0.74
COL27A1-207ENST00000494090 DUX4L4P0CJ87 422 aa19.7■□□□□ 0.74
COL27A1-207ENST00000494090 DUX4L5P0CJ88 424 aa19.7■□□□□ 0.74
COL27A1-207ENST00000494090 DUX4L6P0CJ89 424 aa19.7■□□□□ 0.74
COL27A1-207ENST00000494090 DUX4L7P0CJ90 424 aa19.7■□□□□ 0.74
COL27A1-207ENST00000494090 EPHX2P34913 555 aa19.7■□□□□ 0.74
COL27A1-207ENST00000494090 ZNF606Q8WXB4 792 aa19.7■□□□□ 0.74
COL27A1-207ENST00000494090 TUBGCP3Q96CW5 907 aa19.7■□□□□ 0.74
COL27A1-207ENST00000494090 WDR41Q9HAD4 459 aa19.7■□□□□ 0.74
COL27A1-207ENST00000494090 TBC1D13Q9NVG8 400 aa19.7■□□□□ 0.74
COL27A1-207ENST00000494090 DUX4Q9UBX2 424 aa19.7■□□□□ 0.74
COL27A1-207ENST00000494090 SIK3Q9Y2K2 1263 aa19.7■□□□□ 0.74
COL27A1-207ENST00000494090 TNS2Q63HR2 1409 aa19.7■□□□□ 0.74
COL27A1-207ENST00000494090 FKBP6O75344 327 aa19.7■□□□□ 0.74
COL27A1-207ENST00000494090 RARAP10276 462 aa19.7■□□□□ 0.74
COL27A1-207ENST00000494090 EPB42P16452 691 aa19.7■□□□□ 0.74
COL27A1-207ENST00000494090 GRK3P35626 688 aa19.7■□□□□ 0.74
COL27A1-207ENST00000494090 OAZ1P54368 228 aa19.7■□□□□ 0.74
COL27A1-207ENST00000494090 SLC12A3P55017 1021 aa19.7■□□□□ 0.74
COL27A1-207ENST00000494090 LRRC4BQ9NT99 713 aa19.7■□□□□ 0.74
COL27A1-207ENST00000494090 CXCL11O14625 94 aa19.7■□□□□ 0.74
COL27A1-207ENST00000494090 MAP3K13O43283 966 aa19.7■□□□□ 0.74
COL27A1-207ENST00000494090 MGAT5Q09328 741 aa19.7■□□□□ 0.74
COL27A1-207ENST00000494090 ZNF268Q14587 947 aaPredicted RBP19.7■□□□□ 0.74
COL27A1-207ENST00000494090 ZCWPW2Q504Y3 356 aa19.7■□□□□ 0.74
COL27A1-207ENST00000494090 PGM2Q96G03 612 aa19.7■□□□□ 0.74
COL27A1-207ENST00000494090 KCNQ5Q9NR82 932 aa19.7■□□□□ 0.74
COL27A1-207ENST00000494090 LNPEPQ9UIQ6 1025 aa19.7■□□□□ 0.74
COL27A1-207ENST00000494090 M0R3G1 203 aa19.69■□□□□ 0.74
COL27A1-207ENST00000494090 NPM3O75607 178 aaKnown RBP19.69■□□□□ 0.74
COL27A1-207ENST00000494090 TOMM70O94826 608 aa19.69■□□□□ 0.74
COL27A1-207ENST00000494090 RENBPP51606 427 aa19.69■□□□□ 0.74
COL27A1-207ENST00000494090 LAMTOR4Q0VGL1 99 aa19.69■□□□□ 0.74
COL27A1-207ENST00000494090 PLD1Q13393 1074 aa19.69■□□□□ 0.74
COL27A1-207ENST00000494090 BTN2A2Q8WVV5 523 aa19.69■□□□□ 0.74
COL27A1-207ENST00000494090 JADE3Q92613 823 aa19.69■□□□□ 0.74
COL27A1-207ENST00000494090 MTMR9Q96QG7 549 aa19.69■□□□□ 0.74
COL27A1-207ENST00000494090 TGM3Q08188 693 aa19.69■□□□□ 0.74
COL27A1-207ENST00000494090 TRIM60Q495X7 471 aa19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms