RNA–Protein interactions for RNA: ENST00000494083.1

CDC42EP3-205, Transcript of CDC42 effector protein 3, humanhuman

TSL 2

Gene CDC42EP3, Length 3,726 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-205ENST00000494083 TMPRSS15P98073 1019 aa2.78□□□□□ -1.97
CDC42EP3-205ENST00000494083 U2AF1Q01081 240 aaKnown RBP eCLIP2.78□□□□□ -1.97
CDC42EP3-205ENST00000494083 APBA1Q02410 837 aa2.78□□□□□ -1.97
CDC42EP3-205ENST00000494083 ITIH4Q14624 930 aa2.78□□□□□ -1.97
CDC42EP3-205ENST00000494083 SIX1Q15475 284 aaPredicted RBP2.78□□□□□ -1.97
CDC42EP3-205ENST00000494083 PRAMEF14Q5SWL7 426 aa2.78□□□□□ -1.97
CDC42EP3-205ENST00000494083 CLEC4GQ6UXB4 293 aa2.78□□□□□ -1.97
CDC42EP3-205ENST00000494083 SH2D5Q6ZV89 423 aa2.78□□□□□ -1.97
CDC42EP3-205ENST00000494083 Q6ZVL8 140 aa2.78□□□□□ -1.97
CDC42EP3-205ENST00000494083 ERC1Q8IUD2 1116 aa2.78□□□□□ -1.97
CDC42EP3-205ENST00000494083 NOA1Q8NC60 698 aaKnown RBP2.78□□□□□ -1.97
CDC42EP3-205ENST00000494083 GLB1L3Q8NCI6 653 aaPredicted RBP2.78□□□□□ -1.97
CDC42EP3-205ENST00000494083 IP6K1Q92551 441 aa2.78□□□□□ -1.97
CDC42EP3-205ENST00000494083 FAM227BQ96M60 508 aa2.78□□□□□ -1.97
CDC42EP3-205ENST00000494083 MBOAT7Q96N66 472 aa2.78□□□□□ -1.97
CDC42EP3-205ENST00000494083 SLC2A13Q96QE2 648 aa2.78□□□□□ -1.97
CDC42EP3-205ENST00000494083 OSBPL6Q9BZF3 934 aa2.78□□□□□ -1.97
CDC42EP3-205ENST00000494083 DDX47Q9H0S4 455 aaKnown RBP2.78□□□□□ -1.97
CDC42EP3-205ENST00000494083 LY9Q9HBG7 655 aa2.78□□□□□ -1.97
CDC42EP3-205ENST00000494083 TMBIM4Q9HC24 238 aa2.78□□□□□ -1.97
CDC42EP3-205ENST00000494083 PDRG1Q9NUG6 133 aa2.78□□□□□ -1.97
CDC42EP3-205ENST00000494083 ANO10Q9NW15 660 aa2.78□□□□□ -1.97
CDC42EP3-205ENST00000494083 ZNHIT2Q9UHR6 403 aa2.78□□□□□ -1.97
CDC42EP3-205ENST00000494083 PCDHA6Q9UN73 950 aa2.78□□□□□ -1.97
CDC42EP3-205ENST00000494083 ATP8A1Q9Y2Q0 1164 aa2.78□□□□□ -1.97
CDC42EP3-205ENST00000494083 DMRT1Q9Y5R6 373 aa2.78□□□□□ -1.97
CDC42EP3-205ENST00000494083 CLIC4Q9Y696 253 aa2.78□□□□□ -1.97
CDC42EP3-205ENST00000494083 NUMBLQ9Y6R0 609 aa2.78□□□□□ -1.97
CDC42EP3-205ENST00000494083 MTSS1O43312 755 aa2.77□□□□□ -1.97
CDC42EP3-205ENST00000494083 JAK2O60674 1132 aa2.77□□□□□ -1.97
CDC42EP3-205ENST00000494083 EYA4O95677 639 aa2.77□□□□□ -1.97
CDC42EP3-205ENST00000494083 CD48P09326 243 aa2.77□□□□□ -1.97
CDC42EP3-205ENST00000494083 CASTP20810 708 aaKnown RBP2.77□□□□□ -1.97
CDC42EP3-205ENST00000494083 CTSSP25774 331 aa2.77□□□□□ -1.97
CDC42EP3-205ENST00000494083 MMP13P45452 471 aa2.77□□□□□ -1.97
CDC42EP3-205ENST00000494083 KCNJ4P48050 445 aa2.77□□□□□ -1.97
CDC42EP3-205ENST00000494083 SCAND1P57086 179 aa2.77□□□□□ -1.97
CDC42EP3-205ENST00000494083 RHBDL3P58872 404 aa2.77□□□□□ -1.97
CDC42EP3-205ENST00000494083 TPM4P67936 248 aa2.77□□□□□ -1.97
CDC42EP3-205ENST00000494083 IRX1P78414 480 aaPredicted RBP2.77□□□□□ -1.97
CDC42EP3-205ENST00000494083 CDK18Q07002 472 aa2.77□□□□□ -1.97
CDC42EP3-205ENST00000494083 KIF5AQ12840 1032 aa2.77□□□□□ -1.97
CDC42EP3-205ENST00000494083 MTA1Q13330 715 aa2.77□□□□□ -1.97
CDC42EP3-205ENST00000494083 BIRC2Q13490 618 aa2.77□□□□□ -1.97
CDC42EP3-205ENST00000494083 KRT32Q14532 448 aa2.77□□□□□ -1.97
CDC42EP3-205ENST00000494083 RRS1Q15050 365 aaKnown RBP2.77□□□□□ -1.97
CDC42EP3-205ENST00000494083 PTPN14Q15678 1187 aa2.77□□□□□ -1.97
CDC42EP3-205ENST00000494083 PTGISQ16647 500 aa2.77□□□□□ -1.97
CDC42EP3-205ENST00000494083 MFSD14BQ5SR56 506 aa2.77□□□□□ -1.97
CDC42EP3-205ENST00000494083 AGBL2Q5U5Z8 902 aa2.77□□□□□ -1.97
CDC42EP3-205ENST00000494083 TBC1D9BQ66K14 1250 aa2.77□□□□□ -1.97
CDC42EP3-205ENST00000494083 PPP1R42Q7Z4L9 355 aa2.77□□□□□ -1.97
CDC42EP3-205ENST00000494083 GLB1L2Q8IW92 636 aa2.77□□□□□ -1.97
CDC42EP3-205ENST00000494083 LRRC43Q8N309 656 aa2.77□□□□□ -1.97
CDC42EP3-205ENST00000494083 MNS1Q8NEH6 495 aa2.77□□□□□ -1.97
CDC42EP3-205ENST00000494083 OR14C36Q8NHC7 312 aa2.77□□□□□ -1.97
CDC42EP3-205ENST00000494083 STRA6Q9BX79 667 aa2.77□□□□□ -1.97
CDC42EP3-205ENST00000494083 GPR88Q9GZN0 384 aa2.77□□□□□ -1.97
CDC42EP3-205ENST00000494083 FOXP1Q9H334 677 aaPredicted RBP2.77□□□□□ -1.97
CDC42EP3-205ENST00000494083 KAT14Q9H8E8 782 aa2.77□□□□□ -1.97
CDC42EP3-205ENST00000494083 GNL3LQ9NVN8 582 aaKnown RBP2.77□□□□□ -1.97
CDC42EP3-205ENST00000494083 RSPH14Q9UHP6 348 aa2.77□□□□□ -1.97
CDC42EP3-205ENST00000494083 ZNF510Q9Y2H8 683 aa2.77□□□□□ -1.97
CDC42EP3-205ENST00000494083 SRPRBQ9Y5M8 271 aaKnown RBP2.77□□□□□ -1.97
CDC42EP3-205ENST00000494083 CDY2AQ9Y6F7 541 aa2.77□□□□□ -1.97
CDC42EP3-205ENST00000494083 UNC119BA6NIH7 251 aa2.77□□□□□ -1.97
CDC42EP3-205ENST00000494083 AHCYL1O43865 530 aa2.77□□□□□ -1.97
CDC42EP3-205ENST00000494083 NOL4O94818 638 aa2.77□□□□□ -1.97
CDC42EP3-205ENST00000494083 MYL1P05976 194 aa2.77□□□□□ -1.97
CDC42EP3-205ENST00000494083 SRGNP10124 158 aa2.77□□□□□ -1.97
CDC42EP3-205ENST00000494083 ATP1A3P13637 1013 aa2.77□□□□□ -1.97
CDC42EP3-205ENST00000494083 IDO1P14902 403 aa2.77□□□□□ -1.97
CDC42EP3-205ENST00000494083 ADSSP30520 456 aa2.77□□□□□ -1.97
CDC42EP3-205ENST00000494083 LSP1P33241 339 aa2.77□□□□□ -1.97
CDC42EP3-205ENST00000494083 GCLCP48506 637 aaPredicted RBP2.77□□□□□ -1.97
CDC42EP3-205ENST00000494083 DRG2P55039 364 aaKnown RBP2.77□□□□□ -1.97
CDC42EP3-205ENST00000494083 SULT2A1Q06520 285 aa2.77□□□□□ -1.97
CDC42EP3-205ENST00000494083 PPFIA1Q13136 1202 aa2.77□□□□□ -1.97
CDC42EP3-205ENST00000494083 ADRM1Q16186 407 aa2.77□□□□□ -1.97
CDC42EP3-205ENST00000494083 TMEM63BQ5T3F8 832 aa2.77□□□□□ -1.97
CDC42EP3-205ENST00000494083 KRTAP5-3Q6L8H2 238 aa2.77□□□□□ -1.97
CDC42EP3-205ENST00000494083 DCLRE1AQ6PJP8 1040 aa2.77□□□□□ -1.97
CDC42EP3-205ENST00000494083 C11orf74Q86VG3 221 aa2.77□□□□□ -1.97
CDC42EP3-205ENST00000494083 HDAC7Q8WUI4 952 aa2.77□□□□□ -1.97
CDC42EP3-205ENST00000494083 MRPS27Q92552 414 aaKnown RBP2.77□□□□□ -1.97
CDC42EP3-205ENST00000494083 GOLGA1Q92805 767 aa2.77□□□□□ -1.97
CDC42EP3-205ENST00000494083 CD101Q93033 1021 aa2.77□□□□□ -1.97
CDC42EP3-205ENST00000494083 IQCDQ96DY2 449 aa2.77□□□□□ -1.97
CDC42EP3-205ENST00000494083 SUCLG2Q96I99 432 aa2.77□□□□□ -1.97
CDC42EP3-205ENST00000494083 BAG1Q99933 345 aaPredicted RBP2.77□□□□□ -1.97
CDC42EP3-205ENST00000494083 ISCA1Q9BUE6 129 aa2.77□□□□□ -1.97
CDC42EP3-205ENST00000494083 FAM129AQ9BZQ8 928 aa2.77□□□□□ -1.97
CDC42EP3-205ENST00000494083 QRSL1Q9H0R6 528 aaKnown RBP2.77□□□□□ -1.97
CDC42EP3-205ENST00000494083 TYW1Q9NV66 732 aaKnown RBP2.77□□□□□ -1.97
CDC42EP3-205ENST00000494083 EIF2B4Q9UI10 523 aaKnown RBP2.77□□□□□ -1.97
CDC42EP3-205ENST00000494083 SYNPO2Q9UMS6 1093 aa2.77□□□□□ -1.97
CDC42EP3-205ENST00000494083 DDX52Q9Y2R4 599 aaKnown RBP eCLIP2.77□□□□□ -1.97
CDC42EP3-205ENST00000494083 TRIP12Q14669 1992 aaPredicted RBP2.77□□□□□ -1.97
CDC42EP3-205ENST00000494083 HMMRO75330 724 aa2.77□□□□□ -1.97
CDC42EP3-205ENST00000494083 FAM107AO95990 144 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms