RNA–Protein interactions for RNA: ENST00000494069.1

LRCH3-219, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 783 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-219ENST00000494069 CACNA2D4Q7Z3S7 1137 aa8.98□□□□□ -0.97
LRCH3-219ENST00000494069 MIB1Q86YT6 1006 aa8.98□□□□□ -0.97
LRCH3-219ENST00000494069 SPNS2Q8IVW8 549 aa8.98□□□□□ -0.97
LRCH3-219ENST00000494069 ARHGEF19Q8IW93 802 aa8.98□□□□□ -0.97
LRCH3-219ENST00000494069 CAMKK1Q8N5S9 505 aa8.98□□□□□ -0.97
LRCH3-219ENST00000494069 IL17RCQ8NAC3 791 aa8.98□□□□□ -0.97
LRCH3-219ENST00000494069 ANKRD52Q8NB46 1076 aa8.98□□□□□ -0.97
LRCH3-219ENST00000494069 TXNDC5Q8NBS9 432 aaKnown RBP8.98□□□□□ -0.97
LRCH3-219ENST00000494069 LMO3Q8TAP4 145 aa8.98□□□□□ -0.97
LRCH3-219ENST00000494069 PTCD2Q8WV60 388 aaKnown RBP8.98□□□□□ -0.97
LRCH3-219ENST00000494069 TFAP2BQ92481 460 aa8.98□□□□□ -0.97
LRCH3-219ENST00000494069 BHMTQ93088 406 aa8.98□□□□□ -0.97
LRCH3-219ENST00000494069 ACDQ96AP0 544 aa8.98□□□□□ -0.97
LRCH3-219ENST00000494069 ERLEC1Q96DZ1 483 aa8.98□□□□□ -0.97
LRCH3-219ENST00000494069 FAXDC2Q96IV6 333 aa8.98□□□□□ -0.97
LRCH3-219ENST00000494069 CEP63Q96MT8 703 aa8.98□□□□□ -0.97
LRCH3-219ENST00000494069 ULBP1Q9BZM6 244 aa8.98□□□□□ -0.97
LRCH3-219ENST00000494069 ARRDC1-AS1Q9H2J1 176 aa8.98□□□□□ -0.97
LRCH3-219ENST00000494069 SMOC1Q9H4F8 434 aa8.98□□□□□ -0.97
LRCH3-219ENST00000494069 PNPLA8Q9NP80 782 aa8.98□□□□□ -0.97
LRCH3-219ENST00000494069 RXFP3Q9NSD7 469 aa8.98□□□□□ -0.97
LRCH3-219ENST00000494069 HOOK1Q9UJC3 728 aaKnown RBP8.98□□□□□ -0.97
LRCH3-219ENST00000494069 RASAL2Q9UJF2 1139 aa8.98□□□□□ -0.97
LRCH3-219ENST00000494069 LHX6Q9UPM6 363 aa8.98□□□□□ -0.97
LRCH3-219ENST00000494069 EML5Q05BV3 1969 aa8.98□□□□□ -0.97
LRCH3-219ENST00000494069 KIAA1549LQ6ZVL6 1849 aa8.97□□□□□ -0.97
LRCH3-219ENST00000494069 A0A0A0MRY4 1105 aa8.97□□□□□ -0.97
LRCH3-219ENST00000494069 TBC1D3BA6NDS4 549 aa8.97□□□□□ -0.97
LRCH3-219ENST00000494069 NEDD8-MDP1E9PL57 170 aa8.97□□□□□ -0.97
LRCH3-219ENST00000494069 PIK3R2O00459 728 aa8.97□□□□□ -0.97
LRCH3-219ENST00000494069 ADAM23O75077 832 aa8.97□□□□□ -0.97
LRCH3-219ENST00000494069 CD19P15391 556 aa8.97□□□□□ -0.97
LRCH3-219ENST00000494069 TRIM21P19474 475 aaKnown RBP8.97□□□□□ -0.97
LRCH3-219ENST00000494069 BCKDHBP21953 392 aa8.97□□□□□ -0.97
LRCH3-219ENST00000494069 EIF2DP41214 584 aaKnown RBP8.97□□□□□ -0.97
LRCH3-219ENST00000494069 GRIA2P42262 883 aa8.97□□□□□ -0.97
LRCH3-219ENST00000494069 WASP42768 502 aa8.97□□□□□ -0.97
LRCH3-219ENST00000494069 TKTL1P51854 596 aa8.97□□□□□ -0.97
LRCH3-219ENST00000494069 ATXN1P54253 815 aaKnown RBP8.97□□□□□ -0.97
LRCH3-219ENST00000494069 MRPS21P82921 87 aaKnown RBP8.97□□□□□ -0.97
LRCH3-219ENST00000494069 EFEMP1Q12805 493 aa8.97□□□□□ -0.97
LRCH3-219ENST00000494069 STIM1Q13586 685 aa8.97□□□□□ -0.97
LRCH3-219ENST00000494069 PUM1Q14671 1186 aaKnown RBP eCLIP8.97□□□□□ -0.97
LRCH3-219ENST00000494069 SF3A2Q15428 464 aaKnown RBP8.97□□□□□ -0.97
LRCH3-219ENST00000494069 CRY1Q16526 586 aa8.97□□□□□ -0.97
LRCH3-219ENST00000494069 CAMK4Q16566 473 aa8.97□□□□□ -0.97
LRCH3-219ENST00000494069 PLK5Q496M5 336 aa8.97□□□□□ -0.97
LRCH3-219ENST00000494069 RAB41Q5JT25 222 aa8.97□□□□□ -0.97
LRCH3-219ENST00000494069 TMEM270Q6UE05 265 aa8.97□□□□□ -0.97
LRCH3-219ENST00000494069 Q6ZNB5 142 aa8.97□□□□□ -0.97
LRCH3-219ENST00000494069 TOGARAM2Q6ZUX3 1019 aa8.97□□□□□ -0.97
LRCH3-219ENST00000494069 RRAGAQ7L523 313 aa8.97□□□□□ -0.97
LRCH3-219ENST00000494069 DGLUCYQ7Z3D6 616 aa8.97□□□□□ -0.97
LRCH3-219ENST00000494069 FRMD1Q8N878 549 aa8.97□□□□□ -0.97
LRCH3-219ENST00000494069 MDGA1Q8NFP4 955 aa8.97□□□□□ -0.97
LRCH3-219ENST00000494069 TSTD1Q8NFU3 115 aa8.97□□□□□ -0.97
LRCH3-219ENST00000494069 RLN3Q8WXF3 142 aa8.97□□□□□ -0.97
LRCH3-219ENST00000494069 OTUB2Q96DC9 234 aa8.97□□□□□ -0.97
LRCH3-219ENST00000494069 MED15Q96RN5 788 aa8.97□□□□□ -0.97
LRCH3-219ENST00000494069 ACOX2Q99424 681 aa8.97□□□□□ -0.97
LRCH3-219ENST00000494069 BBS2Q9BXC9 721 aa8.97□□□□□ -0.97
LRCH3-219ENST00000494069 UBXN6Q9BZV1 441 aa8.97□□□□□ -0.97
LRCH3-219ENST00000494069 DUSP15Q9H1R2 295 aaPredicted RBP8.97□□□□□ -0.97
LRCH3-219ENST00000494069 METTL14Q9HCE5 456 aaKnown RBP8.97□□□□□ -0.97
LRCH3-219ENST00000494069 PLK2Q9NYY3 685 aa8.97□□□□□ -0.97
LRCH3-219ENST00000494069 EBF1Q9UH73 591 aa8.97□□□□□ -0.97
LRCH3-219ENST00000494069 DNMT3LQ9UJW3 386 aa8.97□□□□□ -0.97
LRCH3-219ENST00000494069 TSPAN16Q9UKR8 245 aa8.97□□□□□ -0.97
LRCH3-219ENST00000494069 MMP17Q9ULZ9 603 aa8.97□□□□□ -0.97
LRCH3-219ENST00000494069 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.96□□□□□ -0.98
LRCH3-219ENST00000494069 SLC12A8A0AV02 714 aa8.96□□□□□ -0.98
LRCH3-219ENST00000494069 DCDC2BA2VCK2 349 aa8.96□□□□□ -0.98
LRCH3-219ENST00000494069 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.96□□□□□ -0.98
LRCH3-219ENST00000494069 PRRT4C9JH25 899 aa8.96□□□□□ -0.98
LRCH3-219ENST00000494069 O00370 1275 aa8.96□□□□□ -0.98
LRCH3-219ENST00000494069 XPO1O14980 1071 aaKnown RBP8.96□□□□□ -0.98
LRCH3-219ENST00000494069 ZBED1O96006 694 aa8.96□□□□□ -0.98
LRCH3-219ENST00000494069 CISD3P0C7P0 127 aa8.96□□□□□ -0.98
LRCH3-219ENST00000494069 RALAP11233 206 aa8.96□□□□□ -0.98
LRCH3-219ENST00000494069 VDRP11473 427 aa8.96□□□□□ -0.98
LRCH3-219ENST00000494069 TYRP14679 529 aa8.96□□□□□ -0.98
LRCH3-219ENST00000494069 BRD2P25440 801 aaKnown RBP8.96□□□□□ -0.98
LRCH3-219ENST00000494069 TNFRSF4P43489 277 aa8.96□□□□□ -0.98
LRCH3-219ENST00000494069 PLA2G4AP47712 749 aa8.96□□□□□ -0.98
LRCH3-219ENST00000494069 RGS7P49802 495 aa8.96□□□□□ -0.98
LRCH3-219ENST00000494069 YWHAGP61981 247 aaKnown RBP eCLIP8.96□□□□□ -0.98
LRCH3-219ENST00000494069 LMNB2Q03252 620 aa8.96□□□□□ -0.98
LRCH3-219ENST00000494069 KCNH2Q12809 1159 aa8.96□□□□□ -0.98
LRCH3-219ENST00000494069 CSRP2Q16527 193 aa8.96□□□□□ -0.98
LRCH3-219ENST00000494069 PKDCCQ504Y2 493 aa8.96□□□□□ -0.98
LRCH3-219ENST00000494069 SGO2Q562F6 1265 aa8.96□□□□□ -0.98
LRCH3-219ENST00000494069 PPP1R15BQ5SWA1 713 aa8.96□□□□□ -0.98
LRCH3-219ENST00000494069 C10orf76Q5T2E6 689 aa8.96□□□□□ -0.98
LRCH3-219ENST00000494069 BTBD8Q5XKL5 378 aa8.96□□□□□ -0.98
LRCH3-219ENST00000494069 EGFLAMQ63HQ2 1017 aa8.96□□□□□ -0.98
LRCH3-219ENST00000494069 PM20D1Q6GTS8 502 aa8.96□□□□□ -0.98
LRCH3-219ENST00000494069 KLHDC10Q6PID8 442 aa8.96□□□□□ -0.98
LRCH3-219ENST00000494069 PRR23CQ6ZRP0 262 aa8.96□□□□□ -0.98
LRCH3-219ENST00000494069 RASSF3Q86WH2 238 aa8.96□□□□□ -0.98
LRCH3-219ENST00000494069 TRIM59Q8IWR1 403 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms