RNA–Protein interactions for RNA: ENST00000493919.5

BRCA1-222, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-222ENST00000493919 CDONQ4KMG0 1287 aa12.05□□□□□ -0.48
BRCA1-222ENST00000493919 CLLU1OSQ5K130 101 aa12.05□□□□□ -0.48
BRCA1-222ENST00000493919 C16orf54Q6UWD8 224 aa12.05□□□□□ -0.48
BRCA1-222ENST00000493919 ZNF720Q7Z2F6 126 aa12.05□□□□□ -0.48
BRCA1-222ENST00000493919 SPRED2Q7Z698 418 aa12.05□□□□□ -0.48
BRCA1-222ENST00000493919 GALNT7Q86SF2 657 aa12.05□□□□□ -0.48
BRCA1-222ENST00000493919 MAP4K3Q8IVH8 894 aa12.05□□□□□ -0.48
BRCA1-222ENST00000493919 CRIPAKQ8N1N5 446 aa12.05□□□□□ -0.48
BRCA1-222ENST00000493919 SMG8Q8ND04 991 aaKnown RBP12.05□□□□□ -0.48
BRCA1-222ENST00000493919 GLIS3Q8NEA6 775 aa12.05□□□□□ -0.48
BRCA1-222ENST00000493919 ENGASEQ8NFI3 743 aa12.05□□□□□ -0.48
BRCA1-222ENST00000493919 ACO2Q99798 780 aaKnown RBP12.05□□□□□ -0.48
BRCA1-222ENST00000493919 SH3GL2Q99962 352 aa12.05□□□□□ -0.48
BRCA1-222ENST00000493919 APOL5Q9BWW9 433 aa12.05□□□□□ -0.48
BRCA1-222ENST00000493919 MRPL9Q9BYD2 267 aaKnown RBP12.05□□□□□ -0.48
BRCA1-222ENST00000493919 CDT1Q9H211 546 aa12.05□□□□□ -0.48
BRCA1-222ENST00000493919 RC3H2Q9HBD1 1191 aaKnown RBP12.05□□□□□ -0.48
BRCA1-222ENST00000493919 TRIM10Q9UDY6 481 aa12.05□□□□□ -0.48
BRCA1-222ENST00000493919 NFE2L3Q9Y4A8 694 aa12.05□□□□□ -0.48
BRCA1-222ENST00000493919 FNDC1Q4ZHG4 1894 aaPredicted RBP12.05□□□□□ -0.48
BRCA1-222ENST00000493919 C17orf113A0A1B0GUU1 675 aa12.05□□□□□ -0.48
BRCA1-222ENST00000493919 LINC01553A4QN01 128 aa12.05□□□□□ -0.48
BRCA1-222ENST00000493919 GOLGA8MH3BSY2 632 aa12.05□□□□□ -0.48
BRCA1-222ENST00000493919 AKAP5P24588 427 aa12.05□□□□□ -0.48
BRCA1-222ENST00000493919 HNF1BP35680 557 aa12.05□□□□□ -0.48
BRCA1-222ENST00000493919 TRIM23P36406 574 aa12.05□□□□□ -0.48
BRCA1-222ENST00000493919 GNALP38405 381 aa12.05□□□□□ -0.48
BRCA1-222ENST00000493919 ADARP55265 1226 aaKnown RBP12.05□□□□□ -0.48
BRCA1-222ENST00000493919 OSTNP61366 133 aa12.05□□□□□ -0.48
BRCA1-222ENST00000493919 GNGT1P63211 74 aa12.05□□□□□ -0.48
BRCA1-222ENST00000493919 GTF2BQ00403 316 aa12.05□□□□□ -0.48
BRCA1-222ENST00000493919 PPP2R3AQ06190 1150 aa12.05□□□□□ -0.48
BRCA1-222ENST00000493919 PNOCQ13519 176 aa12.05□□□□□ -0.48
BRCA1-222ENST00000493919 IFI16Q16666 785 aaKnown RBP12.05□□□□□ -0.48
BRCA1-222ENST00000493919 DCAF4L1Q3SXM0 396 aa12.05□□□□□ -0.48
BRCA1-222ENST00000493919 INO80DQ53TQ3 878 aaPredicted RBP12.05□□□□□ -0.48
BRCA1-222ENST00000493919 IGSF11Q5DX21 431 aa12.05□□□□□ -0.48
BRCA1-222ENST00000493919 SPOUT1Q5T280 376 aaKnown RBP12.05□□□□□ -0.48
BRCA1-222ENST00000493919 DAB2IPQ5VWQ8 1189 aa12.05□□□□□ -0.48
BRCA1-222ENST00000493919 CNNM4Q6P4Q7 775 aa12.05□□□□□ -0.48
BRCA1-222ENST00000493919 GLB1LQ6UWU2 654 aa12.05□□□□□ -0.48
BRCA1-222ENST00000493919 MPZL3Q6UWV2 235 aa12.05□□□□□ -0.48
BRCA1-222ENST00000493919 Q7L0L9 218 aa12.05□□□□□ -0.48
BRCA1-222ENST00000493919 SPATA24Q86W54 205 aa12.05□□□□□ -0.48
BRCA1-222ENST00000493919 SLC44A2Q8IWA5 706 aaPredicted RBP12.05□□□□□ -0.48
BRCA1-222ENST00000493919 FIBCD1Q8N539 461 aa12.05□□□□□ -0.48
BRCA1-222ENST00000493919 NKAIN3Q8N8D7 197 aa12.05□□□□□ -0.48
BRCA1-222ENST00000493919 PPFIBP2Q8ND30 876 aa12.05□□□□□ -0.48
BRCA1-222ENST00000493919 SLC22A8Q8TCC7 542 aa12.05□□□□□ -0.48
BRCA1-222ENST00000493919 SGK3Q96BR1 496 aa12.05□□□□□ -0.48
BRCA1-222ENST00000493919 ZNF689Q96CS4 500 aaPredicted RBP12.05□□□□□ -0.48
BRCA1-222ENST00000493919 ZBTB45Q96K62 511 aaPredicted RBP12.05□□□□□ -0.48
BRCA1-222ENST00000493919 GPATCH1Q9BRR8 931 aaKnown RBP12.05□□□□□ -0.48
BRCA1-222ENST00000493919 RNF39Q9H2S5 420 aa12.05□□□□□ -0.48
BRCA1-222ENST00000493919 RSAD1Q9HA92 442 aa12.05□□□□□ -0.48
BRCA1-222ENST00000493919 HAUS2Q9NVX0 235 aa12.05□□□□□ -0.48
BRCA1-222ENST00000493919 HCSTQ9UBK5 93 aa12.05□□□□□ -0.48
BRCA1-222ENST00000493919 PARP2Q9UGN5 583 aa12.05□□□□□ -0.48
BRCA1-222ENST00000493919 BAIAP2L1Q9UHR4 511 aa12.05□□□□□ -0.48
BRCA1-222ENST00000493919 LAMP5Q9UJQ1 280 aa12.05□□□□□ -0.48
BRCA1-222ENST00000493919 INTUQ9ULD6 942 aa12.05□□□□□ -0.48
BRCA1-222ENST00000493919 GRID1Q9ULK0 1009 aa12.05□□□□□ -0.48
BRCA1-222ENST00000493919 TNFSF13BQ9Y275 285 aa12.05□□□□□ -0.48
BRCA1-222ENST00000493919 GDAQ9Y2T3 454 aa12.05□□□□□ -0.48
BRCA1-222ENST00000493919 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.04□□□□□ -0.48
BRCA1-222ENST00000493919 SNTNA6NMZ2 147 aa12.04□□□□□ -0.48
BRCA1-222ENST00000493919 TISP43B9A030 160 aa12.04□□□□□ -0.48
BRCA1-222ENST00000493919 CLDN3O15551 220 aa12.04□□□□□ -0.48
BRCA1-222ENST00000493919 ZNF623O75123 536 aa12.04□□□□□ -0.48
BRCA1-222ENST00000493919 TOM1L1O75674 476 aa12.04□□□□□ -0.48
BRCA1-222ENST00000493919 APBB3O95704 486 aa12.04□□□□□ -0.48
BRCA1-222ENST00000493919 SYF2O95926 243 aaKnown RBP12.04□□□□□ -0.48
BRCA1-222ENST00000493919 TBXAS1P24557 533 aaPredicted RBP12.04□□□□□ -0.48
BRCA1-222ENST00000493919 DAB2P98082 770 aa12.04□□□□□ -0.48
BRCA1-222ENST00000493919 TAP1Q03518 808 aa12.04□□□□□ -0.48
BRCA1-222ENST00000493919 GALNT1Q10472 559 aaPredicted RBP12.04□□□□□ -0.48
BRCA1-222ENST00000493919 ALS2CLQ60I27 953 aa12.04□□□□□ -0.48
BRCA1-222ENST00000493919 KCTD16Q68DU8 428 aa12.04□□□□□ -0.48
BRCA1-222ENST00000493919 ANO7Q6IWH7 933 aa12.04□□□□□ -0.48
BRCA1-222ENST00000493919 PLBD1Q6P4A8 553 aa12.04□□□□□ -0.48
BRCA1-222ENST00000493919 ZPBP2Q6X784 338 aa12.04□□□□□ -0.48
BRCA1-222ENST00000493919 AGMOQ6ZNB7 445 aa12.04□□□□□ -0.48
BRCA1-222ENST00000493919 STXBP4Q6ZWJ1 553 aa12.04□□□□□ -0.48
BRCA1-222ENST00000493919 MILR1Q7Z6M3 343 aa12.04□□□□□ -0.48
BRCA1-222ENST00000493919 TMEM117Q9H0C3 514 aa12.04□□□□□ -0.48
BRCA1-222ENST00000493919 IKZF4Q9H2S9 585 aa12.04□□□□□ -0.48
BRCA1-222ENST00000493919 ZNF576Q9H609 170 aa12.04□□□□□ -0.48
BRCA1-222ENST00000493919 C12orf4Q9NQ89 552 aa12.04□□□□□ -0.48
BRCA1-222ENST00000493919 RNF19AQ9NV58 838 aa12.04□□□□□ -0.48
BRCA1-222ENST00000493919 SNTG2Q9NY99 539 aa12.04□□□□□ -0.48
BRCA1-222ENST00000493919 EHD2Q9NZN4 543 aa12.04□□□□□ -0.48
BRCA1-222ENST00000493919 STRIP2Q9ULQ0 834 aa12.04□□□□□ -0.48
BRCA1-222ENST00000493919 AGAP1Q9UPQ3 857 aa12.04□□□□□ -0.48
BRCA1-222ENST00000493919 TMEM5Q9Y2B1 443 aa12.04□□□□□ -0.48
BRCA1-222ENST00000493919 PCDHB13Q9Y5F0 798 aa12.04□□□□□ -0.48
BRCA1-222ENST00000493919 KIAA1671Q9BY89 1806 aa12.04□□□□□ -0.48
BRCA1-222ENST00000493919 NLRC5Q86WI3 1866 aa12.04□□□□□ -0.48
BRCA1-222ENST00000493919 PVALEFA0A1B0GWK0 134 aa12.03□□□□□ -0.48
BRCA1-222ENST00000493919 OR6C65A6NJZ3 312 aa12.03□□□□□ -0.48
BRCA1-222ENST00000493919 PPP1R37O75864 691 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms