RNA–Protein interactions for RNA: ENST00000493758.5

ITGB1-216, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 366 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-216ENST00000493758 RIPOR3Q96MK2 946 aa5.07□□□□□ -1.6
ITGB1-216ENST00000493758 AS3MTQ9HBK9 375 aa5.07□□□□□ -1.6
ITGB1-216ENST00000493758 TM7SF3Q9NS93 570 aa5.07□□□□□ -1.6
ITGB1-216ENST00000493758 RGL1Q9NZL6 768 aa5.07□□□□□ -1.6
ITGB1-216ENST00000493758 FZD4Q9ULV1 537 aa5.07□□□□□ -1.6
ITGB1-216ENST00000493758 COL3A1P02461 1466 aaPredicted RBP5.07□□□□□ -1.6
ITGB1-216ENST00000493758 GXYLT2A0PJZ3 443 aa5.06□□□□□ -1.6
ITGB1-216ENST00000493758 PPP6CO00743 305 aa5.06□□□□□ -1.6
ITGB1-216ENST00000493758 HNRNPDLO14979 420 aaKnown RBP5.06□□□□□ -1.6
ITGB1-216ENST00000493758 NCK2O43639 380 aa5.06□□□□□ -1.6
ITGB1-216ENST00000493758 CCNT2O60583 730 aaKnown RBP5.06□□□□□ -1.6
ITGB1-216ENST00000493758 COQ9O75208 318 aa5.06□□□□□ -1.6
ITGB1-216ENST00000493758 CDK4P11802 303 aa5.06□□□□□ -1.6
ITGB1-216ENST00000493758 EEF1GP26641 437 aaKnown RBP5.06□□□□□ -1.6
ITGB1-216ENST00000493758 DEUP1Q05D60 604 aa5.06□□□□□ -1.6
ITGB1-216ENST00000493758 BTKQ06187 659 aa5.06□□□□□ -1.6
ITGB1-216ENST00000493758 SRSF4Q08170 494 aaKnown RBP5.06□□□□□ -1.6
ITGB1-216ENST00000493758 KCNB1Q14721 858 aa5.06□□□□□ -1.6
ITGB1-216ENST00000493758 TMEM119Q4V9L6 283 aa5.06□□□□□ -1.6
ITGB1-216ENST00000493758 FAM209BQ5JX69 171 aa5.06□□□□□ -1.6
ITGB1-216ENST00000493758 MEX3CQ5U5Q3 659 aaKnown RBP5.06□□□□□ -1.6
ITGB1-216ENST00000493758 RRAGBQ5VZM2 374 aa5.06□□□□□ -1.6
ITGB1-216ENST00000493758 ARL6IP4Q66PJ3 421 aaKnown RBP5.06□□□□□ -1.6
ITGB1-216ENST00000493758 VSTM1Q6UX27 236 aa5.06□□□□□ -1.6
ITGB1-216ENST00000493758 DCDC5Q6ZRR9 648 aa5.06□□□□□ -1.6
ITGB1-216ENST00000493758 FSTL5Q8N475 847 aaPredicted RBP5.06□□□□□ -1.6
ITGB1-216ENST00000493758 CCDC150Q8NCX0 1101 aa5.06□□□□□ -1.6
ITGB1-216ENST00000493758 OVCA2Q8WZ82 227 aa5.06□□□□□ -1.6
ITGB1-216ENST00000493758 SGCZQ96LD1 299 aa5.06□□□□□ -1.6
ITGB1-216ENST00000493758 CINPQ9BW66 212 aaPredicted RBP5.06□□□□□ -1.6
ITGB1-216ENST00000493758 STK33Q9BYT3 514 aa5.06□□□□□ -1.6
ITGB1-216ENST00000493758 ZNF70Q9UC06 446 aaPredicted RBP5.06□□□□□ -1.6
ITGB1-216ENST00000493758 MAFFQ9ULX9 164 aa5.06□□□□□ -1.6
ITGB1-216ENST00000493758 KAT6AQ92794 2004 aa5.06□□□□□ -1.6
ITGB1-216ENST00000493758 CYP2D7A0A087X1C5 515 aa5.05□□□□□ -1.6
ITGB1-216ENST00000493758 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.05□□□□□ -1.6
ITGB1-216ENST00000493758 TMEM232C9JQI7 657 aa5.05□□□□□ -1.6
ITGB1-216ENST00000493758 GCATO75600 419 aa5.05□□□□□ -1.6
ITGB1-216ENST00000493758 BCAR3O75815 825 aa5.05□□□□□ -1.6
ITGB1-216ENST00000493758 GLP2RO95838 553 aa5.05□□□□□ -1.6
ITGB1-216ENST00000493758 MBPP02686 304 aaPredicted RBP5.05□□□□□ -1.6
ITGB1-216ENST00000493758 HARSP12081 509 aaKnown RBP5.05□□□□□ -1.6
ITGB1-216ENST00000493758 MATN1P21941 496 aa5.05□□□□□ -1.6
ITGB1-216ENST00000493758 GRHL2Q6ISB3 625 aa5.05□□□□□ -1.6
ITGB1-216ENST00000493758 SERPINA13PQ6UXR4 307 aa5.05□□□□□ -1.6
ITGB1-216ENST00000493758 C11orf44Q8N8P7 122 aa5.05□□□□□ -1.6
ITGB1-216ENST00000493758 GLIS1Q8NBF1 620 aa5.05□□□□□ -1.6
ITGB1-216ENST00000493758 P2RY11Q96G91 374 aa5.05□□□□□ -1.6
ITGB1-216ENST00000493758 CCDC138Q96M89 665 aa5.05□□□□□ -1.6
ITGB1-216ENST00000493758 MYD88Q99836 296 aa5.05□□□□□ -1.6
ITGB1-216ENST00000493758 PCDHAC1Q9H158 963 aa5.05□□□□□ -1.6
ITGB1-216ENST00000493758 VPS45Q9NRW7 570 aa5.05□□□□□ -1.6
ITGB1-216ENST00000493758 LPAR3Q9UBY5 353 aa5.05□□□□□ -1.6
ITGB1-216ENST00000493758 MAN2B2Q9Y2E5 1009 aa5.05□□□□□ -1.6
ITGB1-216ENST00000493758 FAM234BA2RU67 622 aa5.04□□□□□ -1.6
ITGB1-216ENST00000493758 DNAJC9-AS1A6NH13 148 aa5.04□□□□□ -1.6
ITGB1-216ENST00000493758 PLIN1O60240 522 aa5.04□□□□□ -1.6
ITGB1-216ENST00000493758 PLA2G6O60733 806 aa5.04□□□□□ -1.6
ITGB1-216ENST00000493758 VIPP01282 170 aa5.04□□□□□ -1.6
ITGB1-216ENST00000493758 THBS4P35443 961 aa5.04□□□□□ -1.6
ITGB1-216ENST00000493758 HSPA7P48741 367 aa5.04□□□□□ -1.6
ITGB1-216ENST00000493758 COPB1P53618 953 aaKnown RBP5.04□□□□□ -1.6
ITGB1-216ENST00000493758 MPEG1Q2M385 716 aa5.04□□□□□ -1.6
ITGB1-216ENST00000493758 RAP1GAP2Q684P5 730 aa5.04□□□□□ -1.6
ITGB1-216ENST00000493758 IL31Q6EBC2 164 aa5.04□□□□□ -1.6
ITGB1-216ENST00000493758 CCDC17Q96LX7 622 aa5.04□□□□□ -1.6
ITGB1-216ENST00000493758 PRSS22Q9GZN4 317 aa5.04□□□□□ -1.6
ITGB1-216ENST00000493758 CERS4Q9HA82 394 aa5.04□□□□□ -1.6
ITGB1-216ENST00000493758 ASAP1Q9ULH1 1129 aa5.04□□□□□ -1.6
ITGB1-216ENST00000493758 ZMYND8Q9ULU4 1186 aaPredicted RBP5.04□□□□□ -1.6
ITGB1-216ENST00000493758 BTBD3Q9Y2F9 522 aa5.04□□□□□ -1.6
ITGB1-216ENST00000493758 DTNAQ9Y4J8 743 aa5.04□□□□□ -1.6
ITGB1-216ENST00000493758 E5RJQ4 531 aa5.03□□□□□ -1.6
ITGB1-216ENST00000493758 PRAMEF2O60811 474 aa5.03□□□□□ -1.6
ITGB1-216ENST00000493758 NDST3O95803 873 aa5.03□□□□□ -1.6
ITGB1-216ENST00000493758 MYL3P08590 195 aa5.03□□□□□ -1.6
ITGB1-216ENST00000493758 TMIGD3P0DMS9 266 aaPredicted RBP5.03□□□□□ -1.6
ITGB1-216ENST00000493758 KELP23276 732 aa5.03□□□□□ -1.6
ITGB1-216ENST00000493758 HTR3AP46098 478 aa5.03□□□□□ -1.6
ITGB1-216ENST00000493758 NEK3P51956 506 aa5.03□□□□□ -1.6
ITGB1-216ENST00000493758 CCDC15Q0P6D6 951 aa5.03□□□□□ -1.6
ITGB1-216ENST00000493758 DAZAP2Q15038 168 aaPredicted RBP5.03□□□□□ -1.6
ITGB1-216ENST00000493758 MAP9Q49MG5 647 aa5.03□□□□□ -1.6
ITGB1-216ENST00000493758 CEP78Q5JTW2 689 aa5.03□□□□□ -1.6
ITGB1-216ENST00000493758 TMEM65Q6PI78 240 aa5.03□□□□□ -1.6
ITGB1-216ENST00000493758 PIGOQ8TEQ8 1089 aa5.03□□□□□ -1.6
ITGB1-216ENST00000493758 DDB2Q92466 427 aa5.03□□□□□ -1.6
ITGB1-216ENST00000493758 C5orf34Q96MH7 638 aa5.03□□□□□ -1.6
ITGB1-216ENST00000493758 FAM118BQ9BPY3 351 aa5.03□□□□□ -1.6
ITGB1-216ENST00000493758 ELAC2Q9BQ52 826 aaKnown RBP5.03□□□□□ -1.6
ITGB1-216ENST00000493758 KCNK9Q9NPC2 374 aa5.03□□□□□ -1.6
ITGB1-216ENST00000493758 HELLSQ9NRZ9 838 aa5.03□□□□□ -1.6
ITGB1-216ENST00000493758 GJB4Q9NTQ9 266 aa5.03□□□□□ -1.6
ITGB1-216ENST00000493758 SCAF8Q9UPN6 1271 aaKnown RBP5.03□□□□□ -1.6
ITGB1-216ENST00000493758 WDR17Q8IZU2 1322 aa5.02□□□□□ -1.61
ITGB1-216ENST00000493758 RNF8O76064 485 aa5.02□□□□□ -1.61
ITGB1-216ENST00000493758 PRR35P0CG20 571 aa5.02□□□□□ -1.61
ITGB1-216ENST00000493758 PECAM1P16284 738 aaPredicted RBP5.02□□□□□ -1.61
ITGB1-216ENST00000493758 DUSP1P28562 367 aa5.02□□□□□ -1.61
ITGB1-216ENST00000493758 PBX1P40424 430 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms