RNA–Protein interactions for RNA: ENST00000493727.5

UPF3A-210, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 937 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-210ENST00000493727 A0A1W2PQJ5 194 aa12.86□□□□□ -0.35
UPF3A-210ENST00000493727 KPNA7A9QM74 516 aa12.86□□□□□ -0.35
UPF3A-210ENST00000493727 MAN2B1O00754 1011 aa12.86□□□□□ -0.35
UPF3A-210ENST00000493727 GYPCP04921 128 aa12.86□□□□□ -0.35
UPF3A-210ENST00000493727 TDGF1P13385 188 aa12.86□□□□□ -0.35
UPF3A-210ENST00000493727 KRT5P13647 590 aa12.86□□□□□ -0.35
UPF3A-210ENST00000493727 CD58P19256 250 aa12.86□□□□□ -0.35
UPF3A-210ENST00000493727 TYMPP19971 482 aa12.86□□□□□ -0.35
UPF3A-210ENST00000493727 SDHBP21912 280 aa12.86□□□□□ -0.35
UPF3A-210ENST00000493727 CASP14P31944 242 aa12.86□□□□□ -0.35
UPF3A-210ENST00000493727 USP8P40818 1118 aa12.86□□□□□ -0.35
UPF3A-210ENST00000493727 RPS9P46781 194 aaKnown RBP12.86□□□□□ -0.35
UPF3A-210ENST00000493727 EPHA5P54756 1037 aa12.86□□□□□ -0.35
UPF3A-210ENST00000493727 GSDMDP57764 484 aa12.86□□□□□ -0.35
UPF3A-210ENST00000493727 LILRA4P59901 499 aa12.86□□□□□ -0.35
UPF3A-210ENST00000493727 TWF1Q12792 350 aa12.86□□□□□ -0.35
UPF3A-210ENST00000493727 ZNF852Q6ZMS4 543 aa12.86□□□□□ -0.35
UPF3A-210ENST00000493727 TPRG1Q6ZUI0 275 aa12.86□□□□□ -0.35
UPF3A-210ENST00000493727 DEPDC1BQ8WUY9 529 aa12.86□□□□□ -0.35
UPF3A-210ENST00000493727 ATRIPQ8WXE1 791 aa12.86□□□□□ -0.35
UPF3A-210ENST00000493727 SMARCD2Q92925 531 aa12.86□□□□□ -0.35
UPF3A-210ENST00000493727 KAT5Q92993 513 aa12.86□□□□□ -0.35
UPF3A-210ENST00000493727 FAXDC2Q96IV6 333 aa12.86□□□□□ -0.35
UPF3A-210ENST00000493727 ASB16Q96NS5 453 aa12.86□□□□□ -0.35
UPF3A-210ENST00000493727 IER2Q9BTL4 223 aa12.86□□□□□ -0.35
UPF3A-210ENST00000493727 TRMT61BQ9BVS5 477 aaKnown RBP12.86□□□□□ -0.35
UPF3A-210ENST00000493727 EDEM3Q9BZQ6 932 aa12.86□□□□□ -0.35
UPF3A-210ENST00000493727 SMYD3Q9H7B4 428 aa12.86□□□□□ -0.35
UPF3A-210ENST00000493727 BRD9Q9H8M2 597 aa12.86□□□□□ -0.35
UPF3A-210ENST00000493727 NDFIP2Q9NV92 336 aa12.86□□□□□ -0.35
UPF3A-210ENST00000493727 CAPN11Q9UMQ6 739 aa12.86□□□□□ -0.35
UPF3A-210ENST00000493727 ZNF638Q14966 1978 aaKnown RBP12.85□□□□□ -0.35
UPF3A-210ENST00000493727 NUP210Q8TEM1 1887 aaPredicted RBP12.85□□□□□ -0.35
UPF3A-210ENST00000493727 PRR5-ARHGAP8B1AHC4 643 aa12.85□□□□□ -0.35
UPF3A-210ENST00000493727 CYB561D2O14569 222 aa12.85□□□□□ -0.35
UPF3A-210ENST00000493727 MFAP3LO75121 409 aa12.85□□□□□ -0.35
UPF3A-210ENST00000493727 ODC1P11926 461 aa12.85□□□□□ -0.35
UPF3A-210ENST00000493727 KRT9P35527 623 aa12.85□□□□□ -0.35
UPF3A-210ENST00000493727 STAT1P42224 750 aa12.85□□□□□ -0.35
UPF3A-210ENST00000493727 ASPAP45381 313 aa12.85□□□□□ -0.35
UPF3A-210ENST00000493727 RAP1GAPP47736 663 aa12.85□□□□□ -0.35
UPF3A-210ENST00000493727 ALDH1A3P47895 512 aa12.85□□□□□ -0.35
UPF3A-210ENST00000493727 ADKP55263 362 aaKnown RBP12.85□□□□□ -0.35
UPF3A-210ENST00000493727 ARHGAP8P85298 464 aa12.85□□□□□ -0.35
UPF3A-210ENST00000493727 ZBED6P86452 979 aa12.85□□□□□ -0.35
UPF3A-210ENST00000493727 LMNB2Q03252 620 aa12.85□□□□□ -0.35
UPF3A-210ENST00000493727 DRAP1Q14919 205 aaPredicted RBP12.85□□□□□ -0.35
UPF3A-210ENST00000493727 TANGO2Q6ICL3 276 aa12.85□□□□□ -0.35
UPF3A-210ENST00000493727 FOXR1Q6PIV2 292 aa12.85□□□□□ -0.35
UPF3A-210ENST00000493727 FMNL3Q8IVF7 1028 aa12.85□□□□□ -0.35
UPF3A-210ENST00000493727 KREMEN1Q96MU8 473 aa12.85□□□□□ -0.35
UPF3A-210ENST00000493727 STK33Q9BYT3 514 aa12.85□□□□□ -0.35
UPF3A-210ENST00000493727 ZCCHC2Q9C0B9 1178 aaKnown RBP12.85□□□□□ -0.35
UPF3A-210ENST00000493727 TTYH3Q9C0H2 523 aa12.85□□□□□ -0.35
UPF3A-210ENST00000493727 CYP3A43Q9HB55 503 aa12.85□□□□□ -0.35
UPF3A-210ENST00000493727 TRPV4Q9HBA0 871 aa12.85□□□□□ -0.35
UPF3A-210ENST00000493727 PARD6AQ9NPB6 346 aa12.85□□□□□ -0.35
UPF3A-210ENST00000493727 TRPV5Q9NQA5 729 aa12.85□□□□□ -0.35
UPF3A-210ENST00000493727 ZNHIT6Q9NWK9 470 aaKnown RBP12.85□□□□□ -0.35
UPF3A-210ENST00000493727 GDAP2Q9NXN4 497 aa12.85□□□□□ -0.35
UPF3A-210ENST00000493727 HSFX1Q9UBD0 423 aa12.85□□□□□ -0.35
UPF3A-210ENST00000493727 AJAP1Q9UKB5 411 aaPredicted RBP12.85□□□□□ -0.35
UPF3A-210ENST00000493727 YIPF1Q9Y548 306 aa12.85□□□□□ -0.35
UPF3A-210ENST00000493727 ASB3Q9Y575 518 aa12.85□□□□□ -0.35
UPF3A-210ENST00000493727 PCDHB4Q9Y5E5 795 aa12.85□□□□□ -0.35
UPF3A-210ENST00000493727 SPAG17Q6Q759 2223 aa12.84□□□□□ -0.35
UPF3A-210ENST00000493727 TSC2P49815 1807 aa12.84□□□□□ -0.35
UPF3A-210ENST00000493727 LRRC53A6NM62 1247 aa12.84□□□□□ -0.35
UPF3A-210ENST00000493727 F8VZ95 297 aa12.84□□□□□ -0.35
UPF3A-210ENST00000493727 FGF19O95750 216 aa12.84□□□□□ -0.35
UPF3A-210ENST00000493727 CCDC172P0C7W6 258 aa12.84□□□□□ -0.35
UPF3A-210ENST00000493727 MYL4P12829 197 aa12.84□□□□□ -0.35
UPF3A-210ENST00000493727 PSMC3P17980 439 aa12.84□□□□□ -0.35
UPF3A-210ENST00000493727 FCARP24071 287 aa12.84□□□□□ -0.35
UPF3A-210ENST00000493727 EPHB3P54753 998 aa12.84□□□□□ -0.35
UPF3A-210ENST00000493727 GOLGA8FQ08AF8 430 aa12.84□□□□□ -0.35
UPF3A-210ENST00000493727 GOLGA8DPQ0D2H9 430 aa12.84□□□□□ -0.35
UPF3A-210ENST00000493727 TBX2Q13207 712 aaPredicted RBP12.84□□□□□ -0.35
UPF3A-210ENST00000493727 GPR17Q13304 367 aa12.84□□□□□ -0.35
UPF3A-210ENST00000493727 ASIC2Q16515 512 aa12.84□□□□□ -0.35
UPF3A-210ENST00000493727 FAM78AQ5JUQ0 283 aa12.84□□□□□ -0.35
UPF3A-210ENST00000493727 SFMBT2Q5VUG0 894 aa12.84□□□□□ -0.35
UPF3A-210ENST00000493727 OVOS1Q6IE37 1185 aa12.84□□□□□ -0.35
UPF3A-210ENST00000493727 DPY19L2P1Q6NXN4 242 aa12.84□□□□□ -0.35
UPF3A-210ENST00000493727 C1orf228Q6PIY5 440 aa12.84□□□□□ -0.35
UPF3A-210ENST00000493727 TSSK4Q6SA08 328 aa12.84□□□□□ -0.35
UPF3A-210ENST00000493727 METTL23Q86XA0 190 aa12.84□□□□□ -0.35
UPF3A-210ENST00000493727 ADGRF2Q8IZF7 708 aa12.84□□□□□ -0.35
UPF3A-210ENST00000493727 TTC39CQ8N584 583 aa12.84□□□□□ -0.35
UPF3A-210ENST00000493727 TCEAL4Q96EI5 215 aa12.84□□□□□ -0.35
UPF3A-210ENST00000493727 PDLIM2Q96JY6 352 aa12.84□□□□□ -0.35
UPF3A-210ENST00000493727 SENP8Q96LD8 212 aa12.84□□□□□ -0.35
UPF3A-210ENST00000493727 RTKNQ9BST9 563 aa12.84□□□□□ -0.35
UPF3A-210ENST00000493727 NAA15Q9BXJ9 866 aaKnown RBP12.84□□□□□ -0.35
UPF3A-210ENST00000493727 PLA2G2FQ9BZM2 168 aa12.84□□□□□ -0.35
UPF3A-210ENST00000493727 DNAI2Q9GZS0 605 aa12.84□□□□□ -0.35
UPF3A-210ENST00000493727 SNX25Q9H3E2 840 aa12.84□□□□□ -0.35
UPF3A-210ENST00000493727 FAM124BQ9H5Z6 455 aaPredicted RBP12.84□□□□□ -0.35
UPF3A-210ENST00000493727 CISHQ9NSE2 258 aa12.84□□□□□ -0.35
UPF3A-210ENST00000493727 DSEQ9UL01 958 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms