RNA–Protein interactions for RNA: ENST00000493711.1

SNX17-208, Transcript of sorting nexin 17, humanhuman

TSL 3

Gene SNX17, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-208ENST00000493711 DDX23Q9BUQ8 820 aaKnown RBP13□□□□□ -0.33
SNX17-208ENST00000493711 NUP85Q9BW27 656 aa13□□□□□ -0.33
SNX17-208ENST00000493711 PACSIN1Q9BY11 444 aa13□□□□□ -0.33
SNX17-208ENST00000493711 S1PR5Q9H228 398 aa13□□□□□ -0.33
SNX17-208ENST00000493711 ATXN3LQ9H3M9 355 aa13□□□□□ -0.33
SNX17-208ENST00000493711 IL21Q9HBE4 155 aa13□□□□□ -0.33
SNX17-208ENST00000493711 ZNF334Q9HCZ1 680 aaPredicted RBP13□□□□□ -0.33
SNX17-208ENST00000493711 WDR6Q9NNW5 1121 aaKnown RBP13□□□□□ -0.33
SNX17-208ENST00000493711 METTL5Q9NRN9 209 aaKnown RBP13□□□□□ -0.33
SNX17-208ENST00000493711 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13□□□□□ -0.33
SNX17-208ENST00000493711 TJP2Q9UDY2 1190 aa13□□□□□ -0.33
SNX17-208ENST00000493711 CHORDC1Q9UHD1 332 aaPredicted RBP13□□□□□ -0.33
SNX17-208ENST00000493711 CD207Q9UJ71 328 aa13□□□□□ -0.33
SNX17-208ENST00000493711 MRPS23Q9Y3D9 190 aaKnown RBP13□□□□□ -0.33
SNX17-208ENST00000493711 PAXBP1Q9Y5B6 917 aa13□□□□□ -0.33
SNX17-208ENST00000493711 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13□□□□□ -0.33
SNX17-208ENST00000493711 COL4A4P53420 1690 aaPredicted RBP12.99□□□□□ -0.33
SNX17-208ENST00000493711 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.99□□□□□ -0.33
SNX17-208ENST00000493711 DPYSL4O14531 572 aa12.99□□□□□ -0.33
SNX17-208ENST00000493711 TBX10O75333 385 aa12.99□□□□□ -0.33
SNX17-208ENST00000493711 ABL1P00519 1130 aa12.99□□□□□ -0.33
SNX17-208ENST00000493711 F9P00740 461 aa12.99□□□□□ -0.33
SNX17-208ENST00000493711 NCAM1P13591 858 aa12.99□□□□□ -0.33
SNX17-208ENST00000493711 RARGP13631 454 aa12.99□□□□□ -0.33
SNX17-208ENST00000493711 PDGFRAP16234 1089 aa12.99□□□□□ -0.33
SNX17-208ENST00000493711 FSHRP23945 695 aa12.99□□□□□ -0.33
SNX17-208ENST00000493711 WEE1P30291 646 aa12.99□□□□□ -0.33
SNX17-208ENST00000493711 SDC4P31431 198 aa12.99□□□□□ -0.33
SNX17-208ENST00000493711 ATP5C1P36542 298 aaKnown RBP12.99□□□□□ -0.33
SNX17-208ENST00000493711 ZNF143P52747 638 aaPredicted RBP12.99□□□□□ -0.33
SNX17-208ENST00000493711 RNASE9P60153 205 aaKnown RBP12.99□□□□□ -0.33
SNX17-208ENST00000493711 NNTQ13423 1086 aa12.99□□□□□ -0.33
SNX17-208ENST00000493711 PIGHQ14442 188 aaPredicted RBP12.99□□□□□ -0.33
SNX17-208ENST00000493711 SKIV2LQ15477 1246 aaKnown RBP12.99□□□□□ -0.33
SNX17-208ENST00000493711 PUS10Q3MIT2 529 aaKnown RBP12.99□□□□□ -0.33
SNX17-208ENST00000493711 SLC25A52Q3SY17 297 aa12.99□□□□□ -0.33
SNX17-208ENST00000493711 DCAF6Q58WW2 860 aa12.99□□□□□ -0.33
SNX17-208ENST00000493711 MSANTD2Q6P1R3 559 aa12.99□□□□□ -0.33
SNX17-208ENST00000493711 GAREM2Q75VX8 874 aa12.99□□□□□ -0.33
SNX17-208ENST00000493711 BHLHA9Q7RTU4 235 aa12.99□□□□□ -0.33
SNX17-208ENST00000493711 SLC35G2Q8TBE7 412 aa12.99□□□□□ -0.33
SNX17-208ENST00000493711 ZNF564Q8TBZ8 553 aaPredicted RBP12.99□□□□□ -0.33
SNX17-208ENST00000493711 CLEC4CQ8WTT0 213 aa12.99□□□□□ -0.33
SNX17-208ENST00000493711 HLA-CQ95604 372 aa12.99□□□□□ -0.33
SNX17-208ENST00000493711 MCEEQ96PE7 176 aa12.99□□□□□ -0.33
SNX17-208ENST00000493711 CNPY3Q9BT09 278 aa12.99□□□□□ -0.33
SNX17-208ENST00000493711 NACA2Q9H009 215 aa12.99□□□□□ -0.33
SNX17-208ENST00000493711 UBE2ZQ9H832 354 aaPredicted RBP12.99□□□□□ -0.33
SNX17-208ENST00000493711 KCND1Q9NSA2 647 aa12.99□□□□□ -0.33
SNX17-208ENST00000493711 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.99□□□□□ -0.33
SNX17-208ENST00000493711 IP6K2Q9UHH9 426 aa12.99□□□□□ -0.33
SNX17-208ENST00000493711 DNMT3LQ9UJW3 386 aa12.99□□□□□ -0.33
SNX17-208ENST00000493711 FAM50BQ9Y247 325 aa12.99□□□□□ -0.33
SNX17-208ENST00000493711 ZFP37Q9Y6Q3 630 aaPredicted RBP12.99□□□□□ -0.33
SNX17-208ENST00000493711 TRAV19A0A0A6YYK7 116 aa12.98□□□□□ -0.33
SNX17-208ENST00000493711 C2CD4BA6NLJ0 364 aa12.98□□□□□ -0.33
SNX17-208ENST00000493711 TLR5O60602 858 aa12.98□□□□□ -0.33
SNX17-208ENST00000493711 SLC2A3P11169 496 aa12.98□□□□□ -0.33
SNX17-208ENST00000493711 GPD1P21695 349 aa12.98□□□□□ -0.33
SNX17-208ENST00000493711 RFC1P35251 1148 aaPredicted RBP12.98□□□□□ -0.33
SNX17-208ENST00000493711 LTBRP36941 435 aa12.98□□□□□ -0.33
SNX17-208ENST00000493711 NOP2P46087 812 aaKnown RBP12.98□□□□□ -0.33
SNX17-208ENST00000493711 PRSS36Q5K4E3 855 aa12.98□□□□□ -0.33
SNX17-208ENST00000493711 C10orf120Q5SQS8 335 aa12.98□□□□□ -0.33
SNX17-208ENST00000493711 SND1Q7KZF4 910 aaKnown RBP eCLIP12.98□□□□□ -0.33
SNX17-208ENST00000493711 TMEM150AQ86TG1 271 aa12.98□□□□□ -0.33
SNX17-208ENST00000493711 DDX42Q86XP3 938 aaKnown RBP eCLIP12.98□□□□□ -0.33
SNX17-208ENST00000493711 DEFB106AQ8N104 65 aa12.98□□□□□ -0.33
SNX17-208ENST00000493711 SMRP1Q8NCR6 262 aa12.98□□□□□ -0.33
SNX17-208ENST00000493711 NT5C3BQ969T7 300 aa12.98□□□□□ -0.33
SNX17-208ENST00000493711 ARHGEF26Q96DR7 871 aa12.98□□□□□ -0.33
SNX17-208ENST00000493711 SERPINB11Q96P15 392 aa12.98□□□□□ -0.33
SNX17-208ENST00000493711 SMOC2Q9H3U7 446 aa12.98□□□□□ -0.33
SNX17-208ENST00000493711 TASP1Q9H6P5 420 aa12.98□□□□□ -0.33
SNX17-208ENST00000493711 NMUR1Q9HB89 426 aa12.98□□□□□ -0.33
SNX17-208ENST00000493711 HCFC1R1Q9NWW0 138 aa12.98□□□□□ -0.33
SNX17-208ENST00000493711 GDE1Q9NZC3 331 aa12.98□□□□□ -0.33
SNX17-208ENST00000493711 ANAPC7Q9UJX3 599 aa12.98□□□□□ -0.33
SNX17-208ENST00000493711 A0A1W2PRU2 124 aa12.97□□□□□ -0.33
SNX17-208ENST00000493711 GRAP2O75791 330 aa12.97□□□□□ -0.33
SNX17-208ENST00000493711 RNF8O76064 485 aa12.97□□□□□ -0.33
SNX17-208ENST00000493711 OAS1P00973 400 aaKnown RBP12.97□□□□□ -0.33
SNX17-208ENST00000493711 HDCP19113 662 aa12.97□□□□□ -0.33
SNX17-208ENST00000493711 MSNP26038 577 aaKnown RBP12.97□□□□□ -0.33
SNX17-208ENST00000493711 MAN1A1P33908 653 aa12.97□□□□□ -0.33
SNX17-208ENST00000493711 SLC1A1P43005 524 aa12.97□□□□□ -0.33
SNX17-208ENST00000493711 NAP1L1P55209 391 aaKnown RBP12.97□□□□□ -0.33
SNX17-208ENST00000493711 COG7P83436 770 aa12.97□□□□□ -0.33
SNX17-208ENST00000493711 SMAD4Q13485 552 aaKnown RBP12.97□□□□□ -0.33
SNX17-208ENST00000493711 TAF5Q15542 800 aa12.97□□□□□ -0.33
SNX17-208ENST00000493711 CCDC85BQ15834 202 aaPredicted RBP12.97□□□□□ -0.33
SNX17-208ENST00000493711 ACBD5Q5T8D3 534 aaPredicted RBP12.97□□□□□ -0.33
SNX17-208ENST00000493711 HFE2Q6ZVN8 426 aa12.97□□□□□ -0.33
SNX17-208ENST00000493711 STRADAQ7RTN6 431 aa12.97□□□□□ -0.33
SNX17-208ENST00000493711 PHLDB2Q86SQ0 1253 aa12.97□□□□□ -0.33
SNX17-208ENST00000493711 DNAAF5Q86Y56 855 aa12.97□□□□□ -0.33
SNX17-208ENST00000493711 SYCE1Q8N0S2 351 aa12.97□□□□□ -0.33
SNX17-208ENST00000493711 NIPA2Q8N8Q9 360 aa12.97□□□□□ -0.33
SNX17-208ENST00000493711 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.97□□□□□ -0.33
SNX17-208ENST00000493711 SHKBP1Q8TBC3 707 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms