RNA–Protein interactions for RNA: ENST00000493618.5

ATG4B-223, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 899 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-223ENST00000493618 FRMD1Q8N878 549 aa15.41■□□□□ 0.06
ATG4B-223ENST00000493618 TERB1Q8NA31 727 aa15.41■□□□□ 0.06
ATG4B-223ENST00000493618 HMGB4Q8WW32 186 aa15.41■□□□□ 0.06
ATG4B-223ENST00000493618 BBS2Q9BXC9 721 aa15.41■□□□□ 0.06
ATG4B-223ENST00000493618 DNMT3LQ9UJW3 386 aa15.41■□□□□ 0.06
ATG4B-223ENST00000493618 HCN2Q9UL51 889 aa15.41■□□□□ 0.06
ATG4B-223ENST00000493618 TULP2O00295 520 aa15.4■□□□□ 0.06
ATG4B-223ENST00000493618 STC2O76061 302 aa15.4■□□□□ 0.06
ATG4B-223ENST00000493618 ALDH1A2O94788 518 aa15.4■□□□□ 0.06
ATG4B-223ENST00000493618 CD44P16070 742 aaKnown RBP15.4■□□□□ 0.06
ATG4B-223ENST00000493618 PLA2G4AP47712 749 aa15.4■□□□□ 0.06
ATG4B-223ENST00000493618 FKBP3Q00688 224 aaKnown RBP15.4■□□□□ 0.06
ATG4B-223ENST00000493618 EFEMP1Q12805 493 aa15.4■□□□□ 0.06
ATG4B-223ENST00000493618 COBLL1Q53SF7 1204 aa15.4■□□□□ 0.06
ATG4B-223ENST00000493618 PMS2CLQ68D20 193 aa15.4■□□□□ 0.06
ATG4B-223ENST00000493618 TOGARAM2Q6ZUX3 1019 aa15.4■□□□□ 0.06
ATG4B-223ENST00000493618 PIGZQ86VD9 579 aa15.4■□□□□ 0.06
ATG4B-223ENST00000493618 PGBD3Q8N328 593 aa15.4■□□□□ 0.06
ATG4B-223ENST00000493618 ZNF513Q8N8E2 541 aaPredicted RBP15.4■□□□□ 0.06
ATG4B-223ENST00000493618 SPATA20Q8TB22 786 aa15.4■□□□□ 0.06
ATG4B-223ENST00000493618 NDRG1Q92597 394 aaKnown RBP15.4■□□□□ 0.06
ATG4B-223ENST00000493618 DUSP9Q99956 384 aaKnown RBP15.4■□□□□ 0.06
ATG4B-223ENST00000493618 POLMQ9NP87 494 aaPredicted RBP15.4■□□□□ 0.06
ATG4B-223ENST00000493618 VPS45Q9NRW7 570 aa15.4■□□□□ 0.06
ATG4B-223ENST00000493618 PLK2Q9NYY3 685 aa15.4■□□□□ 0.06
ATG4B-223ENST00000493618 MAN1B1Q9UKM7 699 aa15.4■□□□□ 0.06
ATG4B-223ENST00000493618 PCDHGA5Q9Y5G8 931 aa15.4■□□□□ 0.06
ATG4B-223ENST00000493618 USP3Q9Y6I4 520 aa15.4■□□□□ 0.06
ATG4B-223ENST00000493618 BCLAF3A2AJT9 711 aaKnown RBP15.39■□□□□ 0.05
ATG4B-223ENST00000493618 CAVIN2O95810 425 aa15.39■□□□□ 0.05
ATG4B-223ENST00000493618 RALAP11233 206 aa15.39■□□□□ 0.05
ATG4B-223ENST00000493618 CD19P15391 556 aa15.39■□□□□ 0.05
ATG4B-223ENST00000493618 DHPSP49366 369 aaPredicted RBP15.39■□□□□ 0.05
ATG4B-223ENST00000493618 CUL2Q13617 745 aa15.39■□□□□ 0.05
ATG4B-223ENST00000493618 STPG1Q5TH74 334 aa15.39■□□□□ 0.05
ATG4B-223ENST00000493618 EGFLAMQ63HQ2 1017 aa15.39■□□□□ 0.05
ATG4B-223ENST00000493618 ARHGAP17Q68EM7 881 aa15.39■□□□□ 0.05
ATG4B-223ENST00000493618 IL31Q6EBC2 164 aa15.39■□□□□ 0.05
ATG4B-223ENST00000493618 KLHL10Q6JEL2 608 aa15.39■□□□□ 0.05
ATG4B-223ENST00000493618 ARMCX6Q7L4S7 300 aa15.39■□□□□ 0.05
ATG4B-223ENST00000493618 TTC39CQ8N584 583 aa15.39■□□□□ 0.05
ATG4B-223ENST00000493618 UBA3Q8TBC4 463 aa15.39■□□□□ 0.05
ATG4B-223ENST00000493618 SLC35C1Q96A29 364 aa15.39■□□□□ 0.05
ATG4B-223ENST00000493618 P2RY11Q96G91 374 aa15.39■□□□□ 0.05
ATG4B-223ENST00000493618 TIGD1Q96MW7 591 aa15.39■□□□□ 0.05
ATG4B-223ENST00000493618 XPO6Q96QU8 1125 aaKnown RBP15.39■□□□□ 0.05
ATG4B-223ENST00000493618 ACOX2Q99424 681 aa15.39■□□□□ 0.05
ATG4B-223ENST00000493618 ARMCX3Q9UH62 379 aaPredicted RBP15.39■□□□□ 0.05
ATG4B-223ENST00000493618 PATE3B3GLJ2 98 aa15.38■□□□□ 0.05
ATG4B-223ENST00000493618 PRRT4C9JH25 899 aa15.38■□□□□ 0.05
ATG4B-223ENST00000493618 CACNG3O60359 315 aa15.38■□□□□ 0.05
ATG4B-223ENST00000493618 FOXD2O60548 495 aaPredicted RBP15.38■□□□□ 0.05
ATG4B-223ENST00000493618 KLKB1P03952 638 aa15.38■□□□□ 0.05
ATG4B-223ENST00000493618 PSEN1P49768 467 aa15.38■□□□□ 0.05
ATG4B-223ENST00000493618 TKTL1P51854 596 aa15.38■□□□□ 0.05
ATG4B-223ENST00000493618 YWHAGP61981 247 aaKnown RBP eCLIP15.38■□□□□ 0.05
ATG4B-223ENST00000493618 LRRC63Q05C16 580 aa15.38■□□□□ 0.05
ATG4B-223ENST00000493618 PDE4CQ08493 712 aa15.38■□□□□ 0.05
ATG4B-223ENST00000493618 HSF5Q4G112 596 aaPredicted RBP15.38■□□□□ 0.05
ATG4B-223ENST00000493618 KLHDC10Q6PID8 442 aa15.38■□□□□ 0.05
ATG4B-223ENST00000493618 Q6ZNB5 142 aa15.38■□□□□ 0.05
ATG4B-223ENST00000493618 TADA2BQ86TJ2 420 aa15.38■□□□□ 0.05
ATG4B-223ENST00000493618 ANKRD52Q8NB46 1076 aa15.38■□□□□ 0.05
ATG4B-223ENST00000493618 OLIG1Q8TAK6 271 aa15.38■□□□□ 0.05
ATG4B-223ENST00000493618 FAXDC2Q96IV6 333 aa15.38■□□□□ 0.05
ATG4B-223ENST00000493618 ULBP1Q9BZM6 244 aa15.38■□□□□ 0.05
ATG4B-223ENST00000493618 WDR35Q9P2L0 1181 aa15.38■□□□□ 0.05
ATG4B-223ENST00000493618 MBD1Q9UIS9 605 aaPredicted RBP15.38■□□□□ 0.05
ATG4B-223ENST00000493618 HOOK1Q9UJC3 728 aaKnown RBP15.38■□□□□ 0.05
ATG4B-223ENST00000493618 TSPAN16Q9UKR8 245 aa15.38■□□□□ 0.05
ATG4B-223ENST00000493618 COQ4Q9Y3A0 265 aa15.38■□□□□ 0.05
ATG4B-223ENST00000493618 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.37■□□□□ 0.05
ATG4B-223ENST00000493618 SLC12A8A0AV02 714 aa15.37■□□□□ 0.05
ATG4B-223ENST00000493618 BIN1O00499 593 aa15.37■□□□□ 0.05
ATG4B-223ENST00000493618 PSMA7O14818 248 aa15.37■□□□□ 0.05
ATG4B-223ENST00000493618 MAP3K13O43283 966 aa15.37■□□□□ 0.05
ATG4B-223ENST00000493618 GADD45BO75293 160 aaPredicted RBP15.37■□□□□ 0.05
ATG4B-223ENST00000493618 CALCAP01258 141 aa15.37■□□□□ 0.05
ATG4B-223ENST00000493618 HOXB2P14652 356 aa15.37■□□□□ 0.05
ATG4B-223ENST00000493618 CORO1AP31146 461 aaKnown RBP15.37■□□□□ 0.05
ATG4B-223ENST00000493618 P2RY2P41231 377 aa15.37■□□□□ 0.05
ATG4B-223ENST00000493618 FMO5P49326 533 aa15.37■□□□□ 0.05
ATG4B-223ENST00000493618 DGKGP49619 791 aa15.37■□□□□ 0.05
ATG4B-223ENST00000493618 STIM1Q13586 685 aa15.37■□□□□ 0.05
ATG4B-223ENST00000493618 CCDC40Q4G0X9 1142 aa15.37■□□□□ 0.05
ATG4B-223ENST00000493618 PREPLQ4J6C6 727 aaPredicted RBP15.37■□□□□ 0.05
ATG4B-223ENST00000493618 SGO2Q562F6 1265 aa15.37■□□□□ 0.05
ATG4B-223ENST00000493618 RAB41Q5JT25 222 aa15.37■□□□□ 0.05
ATG4B-223ENST00000493618 RNF43Q68DV7 783 aa15.37■□□□□ 0.05
ATG4B-223ENST00000493618 NUDT18Q6ZVK8 323 aa15.37■□□□□ 0.05
ATG4B-223ENST00000493618 RSRC2Q7L4I2 434 aaKnown RBP15.37■□□□□ 0.05
ATG4B-223ENST00000493618 CYP2U1Q7Z449 544 aa15.37■□□□□ 0.05
ATG4B-223ENST00000493618 TMEFF1Q8IYR6 380 aa15.37■□□□□ 0.05
ATG4B-223ENST00000493618 DEFB119Q8N690 84 aa15.37■□□□□ 0.05
ATG4B-223ENST00000493618 UBR7Q8N806 425 aa15.37■□□□□ 0.05
ATG4B-223ENST00000493618 SPACA7Q96KW9 195 aa15.37■□□□□ 0.05
ATG4B-223ENST00000493618 EDEM2Q9BV94 578 aa15.37■□□□□ 0.05
ATG4B-223ENST00000493618 UBXN6Q9BZV1 441 aa15.37■□□□□ 0.05
ATG4B-223ENST00000493618 CLIC5Q9NZA1 410 aa15.37■□□□□ 0.05
ATG4B-223ENST00000493618 MARK1Q9P0L2 795 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms