RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 ZFPM2Q8WW38 1151 aa7.09□□□□□ -1.27
VPS13B-205ENST00000493587 PRR11Q96HE9 360 aaPredicted RBP7.09□□□□□ -1.27
VPS13B-205ENST00000493587 CRAMP1Q96RY5 1269 aa7.09□□□□□ -1.27
VPS13B-205ENST00000493587 TTYH3Q9C0H2 523 aa7.09□□□□□ -1.27
VPS13B-205ENST00000493587 PDGFDQ9GZP0 370 aaPredicted RBP7.09□□□□□ -1.27
VPS13B-205ENST00000493587 KLC2Q9H0B6 622 aa7.09□□□□□ -1.27
VPS13B-205ENST00000493587 BRD7Q9NPI1 651 aa7.09□□□□□ -1.27
VPS13B-205ENST00000493587 KCTD5Q9NXV2 234 aa7.09□□□□□ -1.27
VPS13B-205ENST00000493587 ARID2Q68CP9 1835 aa7.09□□□□□ -1.27
VPS13B-205ENST00000493587 GAKO14976 1311 aa7.09□□□□□ -1.27
VPS13B-205ENST00000493587 A0A1W2PQJ5 194 aa7.09□□□□□ -1.27
VPS13B-205ENST00000493587 B4GALT4O60513 344 aa7.09□□□□□ -1.27
VPS13B-205ENST00000493587 MAGEC1O60732 1142 aa7.09□□□□□ -1.27
VPS13B-205ENST00000493587 TM7SF2O76062 418 aa7.09□□□□□ -1.27
VPS13B-205ENST00000493587 NADKO95544 446 aaPredicted RBP7.09□□□□□ -1.27
VPS13B-205ENST00000493587 TTLL1O95922 423 aa7.09□□□□□ -1.27
VPS13B-205ENST00000493587 BCL10O95999 233 aa7.09□□□□□ -1.27
VPS13B-205ENST00000493587 SERPING1P05155 500 aa7.09□□□□□ -1.27
VPS13B-205ENST00000493587 RARBP10826 455 aa7.09□□□□□ -1.27
VPS13B-205ENST00000493587 GYS1P13807 737 aa7.09□□□□□ -1.27
VPS13B-205ENST00000493587 ALAS2P22557 587 aa7.09□□□□□ -1.27
VPS13B-205ENST00000493587 KLRK1P26718 216 aa7.09□□□□□ -1.27
VPS13B-205ENST00000493587 MCM7P33993 719 aa7.09□□□□□ -1.27
VPS13B-205ENST00000493587 HNF1BP35680 557 aa7.09□□□□□ -1.27
VPS13B-205ENST00000493587 HAAOP46952 286 aa7.09□□□□□ -1.27
VPS13B-205ENST00000493587 HK2P52789 917 aa7.09□□□□□ -1.27
VPS13B-205ENST00000493587 CDH15P55291 814 aa7.09□□□□□ -1.27
VPS13B-205ENST00000493587 DLG4P78352 724 aa7.09□□□□□ -1.27
VPS13B-205ENST00000493587 MYBPC1Q00872 1141 aa7.09□□□□□ -1.27
VPS13B-205ENST00000493587 TAGLNQ01995 201 aaKnown RBP7.09□□□□□ -1.27
VPS13B-205ENST00000493587 CTDSPL2Q05D32 466 aa7.09□□□□□ -1.27
VPS13B-205ENST00000493587 RRP1BQ14684 758 aaKnown RBP7.09□□□□□ -1.27
VPS13B-205ENST00000493587 ASIC2Q16515 512 aa7.09□□□□□ -1.27
VPS13B-205ENST00000493587 METTL24Q5JXM2 366 aa7.09□□□□□ -1.27
VPS13B-205ENST00000493587 ATAD3BQ5T9A4 648 aa7.09□□□□□ -1.27
VPS13B-205ENST00000493587 DUPD1Q68J44 220 aa7.09□□□□□ -1.27
VPS13B-205ENST00000493587 CORO6Q6QEF8 472 aa7.09□□□□□ -1.27
VPS13B-205ENST00000493587 DCP2Q8IU60 420 aaKnown RBP7.09□□□□□ -1.27
VPS13B-205ENST00000493587 MARVELD2Q8N4S9 558 aa7.09□□□□□ -1.27
VPS13B-205ENST00000493587 CELF1Q92879 486 aaKnown RBP7.09□□□□□ -1.27
VPS13B-205ENST00000493587 DCPSQ96C86 337 aaKnown RBP7.09□□□□□ -1.27
VPS13B-205ENST00000493587 ISOC1Q96CN7 298 aa7.09□□□□□ -1.27
VPS13B-205ENST00000493587 TRABDQ9H4I3 376 aa7.09□□□□□ -1.27
VPS13B-205ENST00000493587 FANCFQ9NPI8 374 aa7.09□□□□□ -1.27
VPS13B-205ENST00000493587 UBA2Q9UBT2 640 aaPredicted RBP7.09□□□□□ -1.27
VPS13B-205ENST00000493587 CCNL1Q9UK58 526 aaPredicted RBP7.09□□□□□ -1.27
VPS13B-205ENST00000493587 PCDHGB4Q9UN71 923 aa7.09□□□□□ -1.27
VPS13B-205ENST00000493587 NAALADL1Q9UQQ1 740 aa7.09□□□□□ -1.27
VPS13B-205ENST00000493587 NR2E1Q9Y466 385 aa7.09□□□□□ -1.27
VPS13B-205ENST00000493587 AP4S1Q9Y587 144 aa7.09□□□□□ -1.27
VPS13B-205ENST00000493587 PCDHGB5Q9Y5G0 923 aa7.09□□□□□ -1.27
VPS13B-205ENST00000493587 A0A087X0T9 212 aa7.08□□□□□ -1.28
VPS13B-205ENST00000493587 SSU72P8A0A1W2PR75 194 aa7.08□□□□□ -1.28
VPS13B-205ENST00000493587 POTEB3A0JP26 581 aa7.08□□□□□ -1.28
VPS13B-205ENST00000493587 ARHGEF35A5YM69 484 aa7.08□□□□□ -1.28
VPS13B-205ENST00000493587 GPC4O75487 556 aa7.08□□□□□ -1.28
VPS13B-205ENST00000493587 RNASEH2AO75792 299 aaKnown RBP7.08□□□□□ -1.28
VPS13B-205ENST00000493587 DLGAP3O95886 979 aa7.08□□□□□ -1.28
VPS13B-205ENST00000493587 ASNSP08243 561 aa7.08□□□□□ -1.28
VPS13B-205ENST00000493587 GPD2P43304 727 aa7.08□□□□□ -1.28
VPS13B-205ENST00000493587 IFITM2Q01629 132 aa7.08□□□□□ -1.28
VPS13B-205ENST00000493587 CHRNEQ04844 493 aa7.08□□□□□ -1.28
VPS13B-205ENST00000493587 CHRNDQ07001 517 aa7.08□□□□□ -1.28
VPS13B-205ENST00000493587 NME3Q13232 169 aa7.08□□□□□ -1.28
VPS13B-205ENST00000493587 NPTX1Q15818 432 aa7.08□□□□□ -1.28
VPS13B-205ENST00000493587 ARHGAP44Q17R89 818 aa7.08□□□□□ -1.28
VPS13B-205ENST00000493587 LETM2Q2VYF4 491 aa7.08□□□□□ -1.28
VPS13B-205ENST00000493587 TCHHL1Q5QJ38 904 aaPredicted RBP7.08□□□□□ -1.28
VPS13B-205ENST00000493587 POTEBQ6S5H4 581 aa7.08□□□□□ -1.28
VPS13B-205ENST00000493587 SYCE1Q8N0S2 351 aa7.08□□□□□ -1.28
VPS13B-205ENST00000493587 HTRA1Q92743 480 aa7.08□□□□□ -1.28
VPS13B-205ENST00000493587 C18orf8Q96DM3 657 aa7.08□□□□□ -1.28
VPS13B-205ENST00000493587 SLC10A4Q96EP9 437 aa7.08□□□□□ -1.28
VPS13B-205ENST00000493587 CCDC120Q96HB5 630 aa7.08□□□□□ -1.28
VPS13B-205ENST00000493587 ZKSCAN3Q9BRR0 538 aa7.08□□□□□ -1.28
VPS13B-205ENST00000493587 RAD21L1Q9H4I0 556 aa7.08□□□□□ -1.28
VPS13B-205ENST00000493587 RPRD1BQ9NQG5 326 aaKnown RBP7.08□□□□□ -1.28
VPS13B-205ENST00000493587 HPS4Q9NQG7 708 aa7.08□□□□□ -1.28
VPS13B-205ENST00000493587 RGS17Q9UGC6 210 aaPredicted RBP7.08□□□□□ -1.28
VPS13B-205ENST00000493587 CDC14AQ9UNH5 594 aa7.08□□□□□ -1.28
VPS13B-205ENST00000493587 GNEQ9Y223 722 aaKnown RBP7.08□□□□□ -1.28
VPS13B-205ENST00000493587 EXOC1LA0A1B0GW35 172 aa7.08□□□□□ -1.28
VPS13B-205ENST00000493587 FAM172BPA6NC97 362 aa7.08□□□□□ -1.28
VPS13B-205ENST00000493587 C12orf71A8MTZ7 269 aa7.08□□□□□ -1.28
VPS13B-205ENST00000493587 TMX2-CTNND1H3BSU7 103 aa7.08□□□□□ -1.28
VPS13B-205ENST00000493587 KIAA0391O15091 583 aaKnown RBP7.08□□□□□ -1.28
VPS13B-205ENST00000493587 EXTL3O43909 919 aa7.08□□□□□ -1.28
VPS13B-205ENST00000493587 DNAJA2O60884 412 aa7.08□□□□□ -1.28
VPS13B-205ENST00000493587 SLC5A1P13866 664 aa7.08□□□□□ -1.28
VPS13B-205ENST00000493587 ZNF23P17027 643 aa7.08□□□□□ -1.28
VPS13B-205ENST00000493587 RPL17P18621 184 aaKnown RBP7.08□□□□□ -1.28
VPS13B-205ENST00000493587 PLCG1P19174 1290 aa7.08□□□□□ -1.28
VPS13B-205ENST00000493587 CLK1P49759 484 aaKnown RBP7.08□□□□□ -1.28
VPS13B-205ENST00000493587 ALDH18A1P54886 795 aaKnown RBP7.08□□□□□ -1.28
VPS13B-205ENST00000493587 MLLT6P55198 1093 aaPredicted RBP7.08□□□□□ -1.28
VPS13B-205ENST00000493587 EIF3EP60228 445 aaKnown RBP7.08□□□□□ -1.28
VPS13B-205ENST00000493587 SMARCB1Q12824 385 aa7.08□□□□□ -1.28
VPS13B-205ENST00000493587 MAPK7Q13164 816 aa7.08□□□□□ -1.28
VPS13B-205ENST00000493587 SNX17Q15036 470 aa7.08□□□□□ -1.28
VPS13B-205ENST00000493587 METTL2BQ6P1Q9 378 aaKnown RBP7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms