RNA–Protein interactions for RNA: ENST00000493177.1

MSH6-208, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 813 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-208ENST00000493177 CNOT8Q9UFF9 292 aaKnown RBP14.08□□□□□ -0.16
MSH6-208ENST00000493177 STRIP2Q9ULQ0 834 aa14.08□□□□□ -0.16
MSH6-208ENST00000493177 PYCARDQ9ULZ3 195 aa14.08□□□□□ -0.16
MSH6-208ENST00000493177 REXO2Q9Y3B8 237 aaKnown RBP14.08□□□□□ -0.16
MSH6-208ENST00000493177 SIT1Q9Y3P8 196 aa14.08□□□□□ -0.16
MSH6-208ENST00000493177 ADGRG1Q9Y653 693 aa14.08□□□□□ -0.16
MSH6-208ENST00000493177 SLC38A8A6NNN8 435 aa14.07□□□□□ -0.16
MSH6-208ENST00000493177 HEPACAM2A8MVW5 462 aa14.07□□□□□ -0.16
MSH6-208ENST00000493177 HHLA1C9JL84 531 aa14.07□□□□□ -0.16
MSH6-208ENST00000493177 ATMINO43313 823 aaPredicted RBP14.07□□□□□ -0.16
MSH6-208ENST00000493177 PI15O43692 258 aa14.07□□□□□ -0.16
MSH6-208ENST00000493177 TMEM253P0C7T8 217 aa14.07□□□□□ -0.16
MSH6-208ENST00000493177 FCARP24071 287 aa14.07□□□□□ -0.16
MSH6-208ENST00000493177 VAV2P52735 878 aa14.07□□□□□ -0.16
MSH6-208ENST00000493177 HS1BP3Q53T59 392 aa14.07□□□□□ -0.16
MSH6-208ENST00000493177 STXBP5Q5T5C0 1151 aa14.07□□□□□ -0.16
MSH6-208ENST00000493177 DNAJC24Q6P3W2 148 aa14.07□□□□□ -0.16
MSH6-208ENST00000493177 VITQ6UXI7 678 aa14.07□□□□□ -0.16
MSH6-208ENST00000493177 DENND5BQ6ZUT9 1274 aa14.07□□□□□ -0.16
MSH6-208ENST00000493177 FAM183BPQ6ZVS7 135 aa14.07□□□□□ -0.16
MSH6-208ENST00000493177 GAREM2Q75VX8 874 aa14.07□□□□□ -0.16
MSH6-208ENST00000493177 TMEM110Q86TL2 294 aa14.07□□□□□ -0.16
MSH6-208ENST00000493177 SCAMP5Q8TAC9 235 aa14.07□□□□□ -0.16
MSH6-208ENST00000493177 MRPS31Q92665 395 aaKnown RBP14.07□□□□□ -0.16
MSH6-208ENST00000493177 DNASE1L2Q92874 299 aa14.07□□□□□ -0.16
MSH6-208ENST00000493177 VCPIP1Q96JH7 1222 aa14.07□□□□□ -0.16
MSH6-208ENST00000493177 LRRC3Q9BY71 257 aa14.07□□□□□ -0.16
MSH6-208ENST00000493177 ULBP1Q9BZM6 244 aa14.07□□□□□ -0.16
MSH6-208ENST00000493177 FOXQ1Q9C009 403 aa14.07□□□□□ -0.16
MSH6-208ENST00000493177 THAP2Q9H0W7 228 aa14.07□□□□□ -0.16
MSH6-208ENST00000493177 HEBP1Q9NRV9 189 aa14.07□□□□□ -0.16
MSH6-208ENST00000493177 FAM86C1Q9NVL1 165 aa14.07□□□□□ -0.16
MSH6-208ENST00000493177 WDR35Q9P2L0 1181 aa14.07□□□□□ -0.16
MSH6-208ENST00000493177 KIF26AQ9ULI4 1882 aaPredicted RBP14.07□□□□□ -0.16
MSH6-208ENST00000493177 GREB1Q4ZG55 1949 aa14.06□□□□□ -0.16
MSH6-208ENST00000493177 KANSL1LA0AUZ9 987 aa14.06□□□□□ -0.16
MSH6-208ENST00000493177 NRG2O14511 850 aaPredicted RBP14.06□□□□□ -0.16
MSH6-208ENST00000493177 ZSCAN12O43309 604 aa14.06□□□□□ -0.16
MSH6-208ENST00000493177 FBXO21O94952 628 aa14.06□□□□□ -0.16
MSH6-208ENST00000493177 RTN3O95197 1032 aaPredicted RBP14.06□□□□□ -0.16
MSH6-208ENST00000493177 DCNP07585 359 aaKnown RBP14.06□□□□□ -0.16
MSH6-208ENST00000493177 USP17L7P0C7H9 530 aa14.06□□□□□ -0.16
MSH6-208ENST00000493177 RRM1P23921 792 aa14.06□□□□□ -0.16
MSH6-208ENST00000493177 YWHAQP27348 245 aa14.06□□□□□ -0.16
MSH6-208ENST00000493177 AVPR1AP37288 418 aa14.06□□□□□ -0.16
MSH6-208ENST00000493177 GABRB2P47870 512 aa14.06□□□□□ -0.16
MSH6-208ENST00000493177 TCF15Q12870 199 aa14.06□□□□□ -0.16
MSH6-208ENST00000493177 PTP4A2Q12974 167 aa14.06□□□□□ -0.16
MSH6-208ENST00000493177 ZNF268Q14587 947 aaPredicted RBP14.06□□□□□ -0.16
MSH6-208ENST00000493177 RAB41Q5JT25 222 aa14.06□□□□□ -0.16
MSH6-208ENST00000493177 FAM102AQ5T9C2 384 aaPredicted RBP14.06□□□□□ -0.16
MSH6-208ENST00000493177 ALYREFQ86V81 257 aaKnown RBP14.06□□□□□ -0.16
MSH6-208ENST00000493177 XYLT1Q86Y38 959 aa14.06□□□□□ -0.16
MSH6-208ENST00000493177 ARID3BQ8IVW6 561 aaPredicted RBP14.06□□□□□ -0.16
MSH6-208ENST00000493177 MFSD6LQ8IWD5 586 aa14.06□□□□□ -0.16
MSH6-208ENST00000493177 SCUBE3Q8IX30 993 aa14.06□□□□□ -0.16
MSH6-208ENST00000493177 CCDC105Q8IYK2 499 aa14.06□□□□□ -0.16
MSH6-208ENST00000493177 DTWD2Q8NBA8 298 aa14.06□□□□□ -0.16
MSH6-208ENST00000493177 TTC16Q8NEE8 873 aa14.06□□□□□ -0.16
MSH6-208ENST00000493177 FBXO32Q969P5 355 aa14.06□□□□□ -0.16
MSH6-208ENST00000493177 ARHGEF26Q96DR7 871 aa14.06□□□□□ -0.16
MSH6-208ENST00000493177 SELENOOQ9BVL4 669 aa14.06□□□□□ -0.16
MSH6-208ENST00000493177 FBXO44Q9H4M3 255 aa14.06□□□□□ -0.16
MSH6-208ENST00000493177 TASP1Q9H6P5 420 aa14.06□□□□□ -0.16
MSH6-208ENST00000493177 TRPC7Q9HCX4 862 aa14.06□□□□□ -0.16
MSH6-208ENST00000493177 CNGB3Q9NQW8 809 aa14.06□□□□□ -0.16
MSH6-208ENST00000493177 EHD2Q9NZN4 543 aa14.06□□□□□ -0.16
MSH6-208ENST00000493177 CHORDC1Q9UHD1 332 aaPredicted RBP14.06□□□□□ -0.16
MSH6-208ENST00000493177 INTUQ9ULD6 942 aa14.06□□□□□ -0.16
MSH6-208ENST00000493177 TFR2Q9UP52 801 aa14.06□□□□□ -0.16
MSH6-208ENST00000493177 MRPS17Q9Y2R5 130 aaKnown RBP14.06□□□□□ -0.16
MSH6-208ENST00000493177 PPP2R2CQ9Y2T4 447 aa14.06□□□□□ -0.16
MSH6-208ENST00000493177 COL4A3Q01955 1670 aa14.05□□□□□ -0.16
MSH6-208ENST00000493177 TNFRSF10BO14763 440 aa14.05□□□□□ -0.16
MSH6-208ENST00000493177 NCAM2O15394 837 aa14.05□□□□□ -0.16
MSH6-208ENST00000493177 PAPSS1O43252 624 aaPredicted RBP14.05□□□□□ -0.16
MSH6-208ENST00000493177 GABBR2O75899 941 aa14.05□□□□□ -0.16
MSH6-208ENST00000493177 ZBED1O96006 694 aa14.05□□□□□ -0.16
MSH6-208ENST00000493177 RPL34P49207 117 aaKnown RBP14.05□□□□□ -0.16
MSH6-208ENST00000493177 NAP1L1P55209 391 aaKnown RBP14.05□□□□□ -0.16
MSH6-208ENST00000493177 STARD6P59095 220 aa14.05□□□□□ -0.16
MSH6-208ENST00000493177 USP46P62068 366 aa14.05□□□□□ -0.16
MSH6-208ENST00000493177 SLC6A3Q01959 620 aa14.05□□□□□ -0.16
MSH6-208ENST00000493177 KIF5AQ12840 1032 aa14.05□□□□□ -0.16
MSH6-208ENST00000493177 POTEHQ6S545 545 aa14.05□□□□□ -0.16
MSH6-208ENST00000493177 ZNF852Q6ZMS4 543 aa14.05□□□□□ -0.16
MSH6-208ENST00000493177 ZDHHC17Q8IUH5 632 aa14.05□□□□□ -0.16
MSH6-208ENST00000493177 MAB21L3Q8N8X9 362 aa14.05□□□□□ -0.16
MSH6-208ENST00000493177 PJA1Q8NG27 643 aa14.05□□□□□ -0.16
MSH6-208ENST00000493177 CLEC4CQ8WTT0 213 aa14.05□□□□□ -0.16
MSH6-208ENST00000493177 NDRG1Q92597 394 aaKnown RBP14.05□□□□□ -0.16
MSH6-208ENST00000493177 GOLGA1Q92805 767 aa14.05□□□□□ -0.16
MSH6-208ENST00000493177 FAM149B1Q96BN6 582 aa14.05□□□□□ -0.16
MSH6-208ENST00000493177 CEP295NLQ96MC4 621 aa14.05□□□□□ -0.16
MSH6-208ENST00000493177 METTL5Q9NRN9 209 aaKnown RBP14.05□□□□□ -0.16
MSH6-208ENST00000493177 PARVAQ9NVD7 372 aa14.05□□□□□ -0.16
MSH6-208ENST00000493177 COMMD8Q9NX08 183 aa14.05□□□□□ -0.16
MSH6-208ENST00000493177 TRMT1Q9NXH9 659 aaKnown RBP14.05□□□□□ -0.16
MSH6-208ENST00000493177 CTTNBP2NLQ9P2B4 639 aa14.05□□□□□ -0.16
MSH6-208ENST00000493177 ZMYM5Q9UJ78 669 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms