RNA–Protein interactions for RNA: ENST00000493075.1

LRTM1-202, Transcript of leucine rich repeats and transmembrane domains 1, humanhuman

TSL 1 (best) BASIC

Gene LRTM1, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1-202ENST00000493075 SPEM2Q0P670 501 aa12.07□□□□□ -0.48
LRTM1-202ENST00000493075 MESP2Q0VG99 397 aa12.07□□□□□ -0.48
LRTM1-202ENST00000493075 BST2Q10589 180 aaKnown RBP12.07□□□□□ -0.48
LRTM1-202ENST00000493075 KCNH2Q12809 1159 aa12.07□□□□□ -0.48
LRTM1-202ENST00000493075 LRMPQ12912 555 aa12.07□□□□□ -0.48
LRTM1-202ENST00000493075 STILQ15468 1287 aa12.07□□□□□ -0.48
LRTM1-202ENST00000493075 CNGA2Q16280 664 aa12.07□□□□□ -0.48
LRTM1-202ENST00000493075 RSPO4Q2I0M5 234 aaPredicted RBP12.07□□□□□ -0.48
LRTM1-202ENST00000493075 GOLGA7BQ2TAP0 167 aa12.07□□□□□ -0.48
LRTM1-202ENST00000493075 ANO4Q32M45 955 aa12.07□□□□□ -0.48
LRTM1-202ENST00000493075 PKDCCQ504Y2 493 aa12.07□□□□□ -0.48
LRTM1-202ENST00000493075 EOGTQ5NDL2 527 aa12.07□□□□□ -0.48
LRTM1-202ENST00000493075 LCLAT1Q6UWP7 414 aa12.07□□□□□ -0.48
LRTM1-202ENST00000493075 SCML4Q8N228 414 aa12.07□□□□□ -0.48
LRTM1-202ENST00000493075 NAT16Q8N8M0 369 aa12.07□□□□□ -0.48
LRTM1-202ENST00000493075 IL17RCQ8NAC3 791 aa12.07□□□□□ -0.48
LRTM1-202ENST00000493075 SRRTQ9BXP5 876 aaKnown RBP12.07□□□□□ -0.48
LRTM1-202ENST00000493075 SEMA4GQ9NTN9 838 aa12.07□□□□□ -0.48
LRTM1-202ENST00000493075 NUDT5Q9UKK9 219 aa12.07□□□□□ -0.48
LRTM1-202ENST00000493075 CTNND2Q9UQB3 1225 aa12.07□□□□□ -0.48
LRTM1-202ENST00000493075 PCDHGA5Q9Y5G8 931 aa12.07□□□□□ -0.48
LRTM1-202ENST00000493075 EP300Q09472 2414 aaPredicted RBP12.07□□□□□ -0.48
LRTM1-202ENST00000493075 ZNF292O60281 2723 aa12.06□□□□□ -0.48
LRTM1-202ENST00000493075 O00370 1275 aa12.06□□□□□ -0.48
LRTM1-202ENST00000493075 MDM4O15151 490 aa12.06□□□□□ -0.48
LRTM1-202ENST00000493075 CACNG3O60359 315 aa12.06□□□□□ -0.48
LRTM1-202ENST00000493075 ALDH1A2O94788 518 aa12.06□□□□□ -0.48
LRTM1-202ENST00000493075 RHOBTB1O94844 696 aa12.06□□□□□ -0.48
LRTM1-202ENST00000493075 EPN2O95208 641 aa12.06□□□□□ -0.48
LRTM1-202ENST00000493075 AFPP02771 609 aaKnown RBP12.06□□□□□ -0.48
LRTM1-202ENST00000493075 CHKAP35790 457 aa12.06□□□□□ -0.48
LRTM1-202ENST00000493075 STX17P56962 302 aa12.06□□□□□ -0.48
LRTM1-202ENST00000493075 YWHAGP61981 247 aaKnown RBP eCLIP12.06□□□□□ -0.48
LRTM1-202ENST00000493075 PLK5Q496M5 336 aa12.06□□□□□ -0.48
LRTM1-202ENST00000493075 USP39Q53GS9 565 aaKnown RBP12.06□□□□□ -0.48
LRTM1-202ENST00000493075 EMC10Q5UCC4 262 aa12.06□□□□□ -0.48
LRTM1-202ENST00000493075 SMYD5Q6GMV2 418 aa12.06□□□□□ -0.48
LRTM1-202ENST00000493075 TMEM270Q6UE05 265 aa12.06□□□□□ -0.48
LRTM1-202ENST00000493075 TRMT11Q7Z4G4 463 aaKnown RBP12.06□□□□□ -0.48
LRTM1-202ENST00000493075 KBTBD6Q86V97 674 aa12.06□□□□□ -0.48
LRTM1-202ENST00000493075 PPM1KQ8N3J5 372 aa12.06□□□□□ -0.48
LRTM1-202ENST00000493075 CCDC33Q8N5R6 958 aa12.06□□□□□ -0.48
LRTM1-202ENST00000493075 ALLCQ8N6M5 410 aa12.06□□□□□ -0.48
LRTM1-202ENST00000493075 TERB1Q8NA31 727 aa12.06□□□□□ -0.48
LRTM1-202ENST00000493075 TXNDC5Q8NBS9 432 aaKnown RBP12.06□□□□□ -0.48
LRTM1-202ENST00000493075 SLC35F5Q8WV83 523 aa12.06□□□□□ -0.48
LRTM1-202ENST00000493075 CNOT6LQ96LI5 555 aaKnown RBP12.06□□□□□ -0.48
LRTM1-202ENST00000493075 BBS2Q9BXC9 721 aa12.06□□□□□ -0.48
LRTM1-202ENST00000493075 LRRC4Q9HBW1 653 aa12.06□□□□□ -0.48
LRTM1-202ENST00000493075 POLMQ9NP87 494 aaPredicted RBP12.06□□□□□ -0.48
LRTM1-202ENST00000493075 OLA1Q9NTK5 396 aaKnown RBP12.06□□□□□ -0.48
LRTM1-202ENST00000493075 RWDD2AQ9UIY3 292 aa12.06□□□□□ -0.48
LRTM1-202ENST00000493075 FBXO10Q9UK96 956 aa12.06□□□□□ -0.48
LRTM1-202ENST00000493075 STRIP2Q9ULQ0 834 aa12.06□□□□□ -0.48
LRTM1-202ENST00000493075 PCDHB4Q9Y5E5 795 aa12.06□□□□□ -0.48
LRTM1-202ENST00000493075 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.06□□□□□ -0.48
LRTM1-202ENST00000493075 ANTXRLA6NF34 631 aa12.05□□□□□ -0.48
LRTM1-202ENST00000493075 RNF225M0QZC1 329 aaPredicted RBP12.05□□□□□ -0.48
LRTM1-202ENST00000493075 SGK1O00141 431 aa12.05□□□□□ -0.48
LRTM1-202ENST00000493075 TULP2O00295 520 aa12.05□□□□□ -0.48
LRTM1-202ENST00000493075 KLF8O95600 359 aaPredicted RBP12.05□□□□□ -0.48
LRTM1-202ENST00000493075 KLKB1P03952 638 aa12.05□□□□□ -0.48
LRTM1-202ENST00000493075 CISD3P0C7P0 127 aa12.05□□□□□ -0.48
LRTM1-202ENST00000493075 ZNF806P0C7X5 589 aa12.05□□□□□ -0.48
LRTM1-202ENST00000493075 TYRP14679 529 aa12.05□□□□□ -0.48
LRTM1-202ENST00000493075 TIE1P35590 1138 aa12.05□□□□□ -0.48
LRTM1-202ENST00000493075 KDSRQ06136 332 aa12.05□□□□□ -0.48
LRTM1-202ENST00000493075 EFEMP1Q12805 493 aa12.05□□□□□ -0.48
LRTM1-202ENST00000493075 GRAMD4Q6IC98 578 aa12.05□□□□□ -0.48
LRTM1-202ENST00000493075 TMEM92Q6UXU6 159 aa12.05□□□□□ -0.48
LRTM1-202ENST00000493075 BHLHA9Q7RTU4 235 aa12.05□□□□□ -0.48
LRTM1-202ENST00000493075 DGLUCYQ7Z3D6 616 aa12.05□□□□□ -0.48
LRTM1-202ENST00000493075 MIB1Q86YT6 1006 aa12.05□□□□□ -0.48
LRTM1-202ENST00000493075 SFTPA1Q8IWL2 248 aa12.05□□□□□ -0.48
LRTM1-202ENST00000493075 OLIG1Q8TAK6 271 aa12.05□□□□□ -0.48
LRTM1-202ENST00000493075 UBA3Q8TBC4 463 aa12.05□□□□□ -0.48
LRTM1-202ENST00000493075 TFAP2BQ92481 460 aa12.05□□□□□ -0.48
LRTM1-202ENST00000493075 RTKNQ9BST9 563 aa12.05□□□□□ -0.48
LRTM1-202ENST00000493075 ULBP1Q9BZM6 244 aa12.05□□□□□ -0.48
LRTM1-202ENST00000493075 DUSP15Q9H1R2 295 aaPredicted RBP12.05□□□□□ -0.48
LRTM1-202ENST00000493075 CNGB3Q9NQW8 809 aa12.05□□□□□ -0.48
LRTM1-202ENST00000493075 PLSCR2Q9NRY7 297 aa12.05□□□□□ -0.48
LRTM1-202ENST00000493075 DNAJC17Q9NVM6 304 aaKnown RBP12.05□□□□□ -0.48
LRTM1-202ENST00000493075 MARCH2Q9P0N8 246 aa12.05□□□□□ -0.48
LRTM1-202ENST00000493075 RASAL2Q9UJF2 1139 aa12.05□□□□□ -0.48
LRTM1-202ENST00000493075 CNTN6Q9UQ52 1028 aa12.05□□□□□ -0.48
LRTM1-202ENST00000493075 NEDD8-MDP1E9PL57 170 aa12.04□□□□□ -0.48
LRTM1-202ENST00000493075 ADAM23O75077 832 aa12.04□□□□□ -0.48
LRTM1-202ENST00000493075 PENKP01210 267 aaPredicted RBP12.04□□□□□ -0.48
LRTM1-202ENST00000493075 ZNF132P52740 706 aa12.04□□□□□ -0.48
LRTM1-202ENST00000493075 ATXN1P54253 815 aaKnown RBP12.04□□□□□ -0.48
LRTM1-202ENST00000493075 TRIP4Q15650 581 aaPredicted RBP12.04□□□□□ -0.48
LRTM1-202ENST00000493075 ELF2Q15723 593 aa12.04□□□□□ -0.48
LRTM1-202ENST00000493075 CAMK4Q16566 473 aa12.04□□□□□ -0.48
LRTM1-202ENST00000493075 PLA2G2CQ5R387 149 aa12.04□□□□□ -0.48
LRTM1-202ENST00000493075 C10orf76Q5T2E6 689 aa12.04□□□□□ -0.48
LRTM1-202ENST00000493075 BSPRYQ5W0U4 402 aa12.04□□□□□ -0.48
LRTM1-202ENST00000493075 ANO7Q6IWH7 933 aa12.04□□□□□ -0.48
LRTM1-202ENST00000493075 PRR23CQ6ZRP0 262 aa12.04□□□□□ -0.48
LRTM1-202ENST00000493075 TPGS1Q6ZTW0 290 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms