RNA–Protein interactions for RNA: ENST00000492909.1

PDZRN3-210, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best)

Gene PDZRN3, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-210ENST00000492909 SMARCAL1Q9NZC9 954 aa14.7□□□□□ -0.06
PDZRN3-210ENST00000492909 IL37Q9NZH6 218 aa14.7□□□□□ -0.06
PDZRN3-210ENST00000492909 PCSK1NQ9UHG2 260 aa14.7□□□□□ -0.06
PDZRN3-210ENST00000492909 NAALADL1Q9UQQ1 740 aa14.7□□□□□ -0.06
PDZRN3-210ENST00000492909 COL4A4P53420 1690 aaPredicted RBP14.69□□□□□ -0.06
PDZRN3-210ENST00000492909 SEC24AO95486 1093 aa14.69□□□□□ -0.06
PDZRN3-210ENST00000492909 TRUB2O95900 331 aaKnown RBP14.69□□□□□ -0.06
PDZRN3-210ENST00000492909 FGGP02679 453 aa14.69□□□□□ -0.06
PDZRN3-210ENST00000492909 CNPP09543 421 aaKnown RBP14.69□□□□□ -0.06
PDZRN3-210ENST00000492909 ATF6P18850 670 aa14.69□□□□□ -0.06
PDZRN3-210ENST00000492909 TFE3P19532 575 aaPredicted RBP14.69□□□□□ -0.06
PDZRN3-210ENST00000492909 YWHAQP27348 245 aa14.69□□□□□ -0.06
PDZRN3-210ENST00000492909 IL1R2P27930 398 aa14.69□□□□□ -0.06
PDZRN3-210ENST00000492909 ELF1P32519 619 aa14.69□□□□□ -0.06
PDZRN3-210ENST00000492909 HDAC4P56524 1084 aa14.69□□□□□ -0.06
PDZRN3-210ENST00000492909 YWHAGP61981 247 aaKnown RBP eCLIP14.69□□□□□ -0.06
PDZRN3-210ENST00000492909 USP46P62068 366 aa14.69□□□□□ -0.06
PDZRN3-210ENST00000492909 GPS2Q13227 327 aa14.69□□□□□ -0.06
PDZRN3-210ENST00000492909 ATP13A4Q4VNC1 1196 aa14.69□□□□□ -0.06
PDZRN3-210ENST00000492909 RAB6CQ53S08 254 aa14.69□□□□□ -0.06
PDZRN3-210ENST00000492909 ODF2Q5BJF6 829 aa14.69□□□□□ -0.06
PDZRN3-210ENST00000492909 PPP2R2DQ66LE6 453 aa14.69□□□□□ -0.06
PDZRN3-210ENST00000492909 TXNRD3NBQ6F5E7 133 aa14.69□□□□□ -0.06
PDZRN3-210ENST00000492909 MON1AQ86VX9 555 aa14.69□□□□□ -0.06
PDZRN3-210ENST00000492909 SPPL3Q8TCT6 385 aa14.69□□□□□ -0.06
PDZRN3-210ENST00000492909 POF1BQ8WVV4 589 aa14.69□□□□□ -0.06
PDZRN3-210ENST00000492909 RBM41Q96IZ5 413 aaKnown RBP14.69□□□□□ -0.06
PDZRN3-210ENST00000492909 SAMD11Q96NU1 681 aa14.69□□□□□ -0.06
PDZRN3-210ENST00000492909 NAP1L3Q99457 506 aaPredicted RBP14.69□□□□□ -0.06
PDZRN3-210ENST00000492909 RAB6CQ9H0N0 254 aa14.69□□□□□ -0.06
PDZRN3-210ENST00000492909 TLR9Q9NR96 1032 aa14.69□□□□□ -0.06
PDZRN3-210ENST00000492909 ABCC13Q9NSE7 274 aa14.69□□□□□ -0.06
PDZRN3-210ENST00000492909 IRAK3Q9Y616 596 aa14.69□□□□□ -0.06
PDZRN3-210ENST00000492909 FAM92AA1XBS5 289 aa14.68□□□□□ -0.06
PDZRN3-210ENST00000492909 PRRG1O14668 218 aa14.68□□□□□ -0.06
PDZRN3-210ENST00000492909 KRT1P04264 644 aa14.68□□□□□ -0.06
PDZRN3-210ENST00000492909 ADH1AP07327 375 aa14.68□□□□□ -0.06
PDZRN3-210ENST00000492909 MCM3P25205 808 aa14.68□□□□□ -0.06
PDZRN3-210ENST00000492909 CETN2P41208 172 aa14.68□□□□□ -0.06
PDZRN3-210ENST00000492909 ALDH1A3P47895 512 aa14.68□□□□□ -0.06
PDZRN3-210ENST00000492909 ERVFC1P60507 584 aa14.68□□□□□ -0.06
PDZRN3-210ENST00000492909 ITIH3Q06033 890 aa14.68□□□□□ -0.06
PDZRN3-210ENST00000492909 SMTNL2Q2TAL5 461 aa14.68□□□□□ -0.06
PDZRN3-210ENST00000492909 BTBD8Q5XKL5 378 aa14.68□□□□□ -0.06
PDZRN3-210ENST00000492909 AADACL2Q6P093 401 aa14.68□□□□□ -0.06
PDZRN3-210ENST00000492909 SCYL2Q6P3W7 929 aa14.68□□□□□ -0.06
PDZRN3-210ENST00000492909 CCDC50Q8IVM0 306 aa14.68□□□□□ -0.06
PDZRN3-210ENST00000492909 TCEAL8Q8IYN2 117 aa14.68□□□□□ -0.06
PDZRN3-210ENST00000492909 RCOR2Q8IZ40 523 aa14.68□□□□□ -0.06
PDZRN3-210ENST00000492909 ARHGAP18Q8N392 663 aa14.68□□□□□ -0.06
PDZRN3-210ENST00000492909 GIPC2Q8TF65 315 aa14.68□□□□□ -0.06
PDZRN3-210ENST00000492909 EDEM1Q92611 657 aa14.68□□□□□ -0.06
PDZRN3-210ENST00000492909 FBXO32Q969P5 355 aa14.68□□□□□ -0.06
PDZRN3-210ENST00000492909 FAM161BQ96MY7 647 aa14.68□□□□□ -0.06
PDZRN3-210ENST00000492909 TGS1Q96RS0 853 aaKnown RBP14.68□□□□□ -0.06
PDZRN3-210ENST00000492909 ADAM33Q9BZ11 813 aa14.68□□□□□ -0.06
PDZRN3-210ENST00000492909 SLC28A3Q9HAS3 691 aa14.68□□□□□ -0.06
PDZRN3-210ENST00000492909 KLHL11Q9NVR0 708 aa14.68□□□□□ -0.06
PDZRN3-210ENST00000492909 CDH23Q9H251 3354 aa14.68□□□□□ -0.06
PDZRN3-210ENST00000492909 TARSL2A2RTX5 802 aaKnown RBP14.68□□□□□ -0.06
PDZRN3-210ENST00000492909 SLC38A8A6NNN8 435 aa14.68□□□□□ -0.06
PDZRN3-210ENST00000492909 H3BQF6 201 aa14.68□□□□□ -0.06
PDZRN3-210ENST00000492909 M0QYT0 321 aa14.68□□□□□ -0.06
PDZRN3-210ENST00000492909 ENDOD1O94919 500 aa14.68□□□□□ -0.06
PDZRN3-210ENST00000492909 MTMR3Q13615 1198 aa14.68□□□□□ -0.06
PDZRN3-210ENST00000492909 BOLA3Q53S33 107 aa14.68□□□□□ -0.06
PDZRN3-210ENST00000492909 KCNT1Q5JUK3 1230 aa14.68□□□□□ -0.06
PDZRN3-210ENST00000492909 Q7L0L9 218 aa14.68□□□□□ -0.06
PDZRN3-210ENST00000492909 BNIPLQ7Z465 357 aa14.68□□□□□ -0.06
PDZRN3-210ENST00000492909 SCD5Q86SK9 330 aa14.68□□□□□ -0.06
PDZRN3-210ENST00000492909 SPATA4Q8NEY3 305 aa14.68□□□□□ -0.06
PDZRN3-210ENST00000492909 SLC7A14Q8TBB6 771 aa14.68□□□□□ -0.06
PDZRN3-210ENST00000492909 PEBP4Q96S96 227 aa14.68□□□□□ -0.06
PDZRN3-210ENST00000492909 EMILIN2Q9BXX0 1053 aa14.68□□□□□ -0.06
PDZRN3-210ENST00000492909 TTYH1Q9H313 450 aaPredicted RBP14.68□□□□□ -0.06
PDZRN3-210ENST00000492909 YIPF1Q9Y548 306 aa14.68□□□□□ -0.06
PDZRN3-210ENST00000492909 A0A1W2PQH9 124 aa14.67□□□□□ -0.06
PDZRN3-210ENST00000492909 LRRD1A4D1F6 860 aa14.67□□□□□ -0.06
PDZRN3-210ENST00000492909 EPOPA6NHQ4 379 aa14.67□□□□□ -0.06
PDZRN3-210ENST00000492909 RARAP10276 462 aa14.67□□□□□ -0.06
PDZRN3-210ENST00000492909 RDXP35241 583 aaKnown RBP14.67□□□□□ -0.06
PDZRN3-210ENST00000492909 PSEN1P49768 467 aa14.67□□□□□ -0.06
PDZRN3-210ENST00000492909 PITX1P78337 314 aaPredicted RBP14.67□□□□□ -0.06
PDZRN3-210ENST00000492909 DEUP1Q05D60 604 aa14.67□□□□□ -0.06
PDZRN3-210ENST00000492909 TAF10Q12962 218 aa14.67□□□□□ -0.06
PDZRN3-210ENST00000492909 OTUD1Q5VV17 481 aaPredicted RBP14.67□□□□□ -0.06
PDZRN3-210ENST00000492909 PLPP4Q5VZY2 271 aa14.67□□□□□ -0.06
PDZRN3-210ENST00000492909 CYP4V2Q6ZWL3 525 aaPredicted RBP14.67□□□□□ -0.06
PDZRN3-210ENST00000492909 MRPL43Q8N983 215 aaKnown RBP14.67□□□□□ -0.06
PDZRN3-210ENST00000492909 TEKT4Q8WW24 435 aa14.67□□□□□ -0.06
PDZRN3-210ENST00000492909 RNF25Q96BH1 459 aaPredicted RBP14.67□□□□□ -0.06
PDZRN3-210ENST00000492909 ACSF2Q96CM8 615 aaPredicted RBP14.67□□□□□ -0.06
PDZRN3-210ENST00000492909 PGAP3Q96FM1 320 aaPredicted RBP14.67□□□□□ -0.06
PDZRN3-210ENST00000492909 SLITRK1Q96PX8 696 aa14.67□□□□□ -0.06
PDZRN3-210ENST00000492909 TTLL2Q9BWV7 592 aa14.67□□□□□ -0.06
PDZRN3-210ENST00000492909 NMUR1Q9HB89 426 aa14.67□□□□□ -0.06
PDZRN3-210ENST00000492909 GMIPQ9P107 970 aa14.67□□□□□ -0.06
PDZRN3-210ENST00000492909 CALCOCO1Q9P1Z2 691 aa14.67□□□□□ -0.06
PDZRN3-210ENST00000492909 MTCL1Q9Y4B5 1905 aaKnown RBP14.66□□□□□ -0.06
PDZRN3-210ENST00000492909 C2orf71A6NGG8 1288 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms