RNA–Protein interactions for RNA: ENST00000492851.1

COL6A1-205, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-205ENST00000492851 ZNF394Q53GI3 561 aa13.1□□□□□ -0.31
COL6A1-205ENST00000492851 EMC10Q5UCC4 262 aa13.1□□□□□ -0.31
COL6A1-205ENST00000492851 TCERG1LQ5VWI1 586 aa13.1□□□□□ -0.31
COL6A1-205ENST00000492851 DAB2IPQ5VWQ8 1189 aa13.1□□□□□ -0.31
COL6A1-205ENST00000492851 SLC36A4Q6YBV0 504 aa13.1□□□□□ -0.31
COL6A1-205ENST00000492851 SMARCE1Q969G3 411 aa13.1□□□□□ -0.31
COL6A1-205ENST00000492851 JAKMIP2Q96AA8 810 aa13.1□□□□□ -0.31
COL6A1-205ENST00000492851 CHAMP1Q96JM3 812 aa13.1□□□□□ -0.31
COL6A1-205ENST00000492851 ARMCX3Q9UH62 379 aaPredicted RBP13.1□□□□□ -0.31
COL6A1-205ENST00000492851 STRIP2Q9ULQ0 834 aa13.1□□□□□ -0.31
COL6A1-205ENST00000492851 COQ4Q9Y3A0 265 aa13.1□□□□□ -0.31
COL6A1-205ENST00000492851 HELZP42694 1942 aaKnown RBP13.09□□□□□ -0.31
COL6A1-205ENST00000492851 CEP250Q9BV73 2442 aa13.09□□□□□ -0.31
COL6A1-205ENST00000492851 GFRA2O00451 464 aa13.09□□□□□ -0.31
COL6A1-205ENST00000492851 AP5Z1O43299 807 aa13.09□□□□□ -0.31
COL6A1-205ENST00000492851 ADAM23O75077 832 aa13.09□□□□□ -0.31
COL6A1-205ENST00000492851 ZNF217O75362 1048 aa13.09□□□□□ -0.31
COL6A1-205ENST00000492851 TBXAS1P24557 533 aaPredicted RBP13.09□□□□□ -0.31
COL6A1-205ENST00000492851 HOXD12P35452 270 aa13.09□□□□□ -0.31
COL6A1-205ENST00000492851 DGKGP49619 791 aa13.09□□□□□ -0.31
COL6A1-205ENST00000492851 PGFP49763 221 aa13.09□□□□□ -0.31
COL6A1-205ENST00000492851 RAD23BP54727 409 aa13.09□□□□□ -0.31
COL6A1-205ENST00000492851 LMAN2Q12907 356 aa13.09□□□□□ -0.31
COL6A1-205ENST00000492851 DCAF17Q5H9S7 520 aaPredicted RBP13.09□□□□□ -0.31
COL6A1-205ENST00000492851 TPGS1Q6ZTW0 290 aa13.09□□□□□ -0.31
COL6A1-205ENST00000492851 RSRC2Q7L4I2 434 aaKnown RBP13.09□□□□□ -0.31
COL6A1-205ENST00000492851 GPRIN1Q7Z2K8 1008 aa13.09□□□□□ -0.31
COL6A1-205ENST00000492851 CYP2U1Q7Z449 544 aa13.09□□□□□ -0.31
COL6A1-205ENST00000492851 SLC4A11Q8NBS3 891 aa13.09□□□□□ -0.31
COL6A1-205ENST00000492851 SPATA20Q8TB22 786 aa13.09□□□□□ -0.31
COL6A1-205ENST00000492851 HMGB4Q8WW32 186 aa13.09□□□□□ -0.31
COL6A1-205ENST00000492851 SEMA4DQ92854 862 aa13.09□□□□□ -0.31
COL6A1-205ENST00000492851 DHTKD1Q96HY7 919 aaPredicted RBP13.09□□□□□ -0.31
COL6A1-205ENST00000492851 LSM14BQ9BX40 385 aaKnown RBP13.09□□□□□ -0.31
COL6A1-205ENST00000492851 NMUR1Q9HB89 426 aa13.09□□□□□ -0.31
COL6A1-205ENST00000492851 GDPD2Q9HCC8 539 aa13.09□□□□□ -0.31
COL6A1-205ENST00000492851 OSER1Q9NX31 292 aa13.09□□□□□ -0.31
COL6A1-205ENST00000492851 HESX1Q9UBX0 185 aa13.09□□□□□ -0.31
COL6A1-205ENST00000492851 CIZ1Q9ULV3 898 aaPredicted RBP13.09□□□□□ -0.31
COL6A1-205ENST00000492851 INVSQ9Y283 1065 aa13.09□□□□□ -0.31
COL6A1-205ENST00000492851 GTF3C3Q9Y5Q9 886 aa13.09□□□□□ -0.31
COL6A1-205ENST00000492851 TCRBV21S2A2A0A5A6 115 aa13.08□□□□□ -0.32
COL6A1-205ENST00000492851 PSMA7O14818 248 aa13.08□□□□□ -0.32
COL6A1-205ENST00000492851 CYBBP04839 570 aa13.08□□□□□ -0.32
COL6A1-205ENST00000492851 HOXB2P14652 356 aa13.08□□□□□ -0.32
COL6A1-205ENST00000492851 DHPSP49366 369 aaPredicted RBP13.08□□□□□ -0.32
COL6A1-205ENST00000492851 MESP2Q0VG99 397 aa13.08□□□□□ -0.32
COL6A1-205ENST00000492851 CUL2Q13617 745 aa13.08□□□□□ -0.32
COL6A1-205ENST00000492851 SGO2Q562F6 1265 aa13.08□□□□□ -0.32
COL6A1-205ENST00000492851 RAB41Q5JT25 222 aa13.08□□□□□ -0.32
COL6A1-205ENST00000492851 ANKRD40Q6AI12 368 aa13.08□□□□□ -0.32
COL6A1-205ENST00000492851 PM20D1Q6GTS8 502 aa13.08□□□□□ -0.32
COL6A1-205ENST00000492851 Q6ZNB5 142 aa13.08□□□□□ -0.32
COL6A1-205ENST00000492851 RABEPKQ7Z6M1 372 aa13.08□□□□□ -0.32
COL6A1-205ENST00000492851 SCD5Q86SK9 330 aa13.08□□□□□ -0.32
COL6A1-205ENST00000492851 PIGZQ86VD9 579 aa13.08□□□□□ -0.32
COL6A1-205ENST00000492851 MIB1Q86YT6 1006 aa13.08□□□□□ -0.32
COL6A1-205ENST00000492851 SYT12Q8IV01 421 aa13.08□□□□□ -0.32
COL6A1-205ENST00000492851 ZC3H3Q8IXZ2 948 aaKnown RBP13.08□□□□□ -0.32
COL6A1-205ENST00000492851 SMYD4Q8IYR2 804 aaPredicted RBP13.08□□□□□ -0.32
COL6A1-205ENST00000492851 CHPFQ8IZ52 775 aa13.08□□□□□ -0.32
COL6A1-205ENST00000492851 ENGASEQ8NFI3 743 aa13.08□□□□□ -0.32
COL6A1-205ENST00000492851 UCMAQ8WVF2 138 aa13.08□□□□□ -0.32
COL6A1-205ENST00000492851 EEF2KMTQ96G04 330 aa13.08□□□□□ -0.32
COL6A1-205ENST00000492851 EDEM2Q9BV94 578 aa13.08□□□□□ -0.32
COL6A1-205ENST00000492851 OLA1Q9NTK5 396 aaKnown RBP13.08□□□□□ -0.32
COL6A1-205ENST00000492851 EVLQ9UI08 416 aaPredicted RBP13.08□□□□□ -0.32
COL6A1-205ENST00000492851 XPO1O14980 1071 aaKnown RBP13.07□□□□□ -0.32
COL6A1-205ENST00000492851 PMM2O15305 246 aa13.07□□□□□ -0.32
COL6A1-205ENST00000492851 TIMM44O43615 452 aa13.07□□□□□ -0.32
COL6A1-205ENST00000492851 STC2O76061 302 aa13.07□□□□□ -0.32
COL6A1-205ENST00000492851 ZBED1O96006 694 aa13.07□□□□□ -0.32
COL6A1-205ENST00000492851 CHRM1P11229 460 aaPredicted RBP13.07□□□□□ -0.32
COL6A1-205ENST00000492851 VDRP11473 427 aa13.07□□□□□ -0.32
COL6A1-205ENST00000492851 HNRNPLP14866 589 aaKnown RBP eCLIP13.07□□□□□ -0.32
COL6A1-205ENST00000492851 TKTL1P51854 596 aa13.07□□□□□ -0.32
COL6A1-205ENST00000492851 BCAT1P54687 386 aa13.07□□□□□ -0.32
COL6A1-205ENST00000492851 ZNF445P59923 1031 aa13.07□□□□□ -0.32
COL6A1-205ENST00000492851 YWHAGP61981 247 aaKnown RBP eCLIP13.07□□□□□ -0.32
COL6A1-205ENST00000492851 MAP7D1Q3KQU3 841 aa13.07□□□□□ -0.32
COL6A1-205ENST00000492851 FOXR2Q6PJQ5 311 aa13.07□□□□□ -0.32
COL6A1-205ENST00000492851 SFTPA1Q8IWL2 248 aa13.07□□□□□ -0.32
COL6A1-205ENST00000492851 CEP76Q8TAP6 659 aa13.07□□□□□ -0.32
COL6A1-205ENST00000492851 PIGKQ92643 395 aa13.07□□□□□ -0.32
COL6A1-205ENST00000492851 TATDN2Q93075 761 aa13.07□□□□□ -0.32
COL6A1-205ENST00000492851 WBP2Q969T9 261 aa13.07□□□□□ -0.32
COL6A1-205ENST00000492851 CEP63Q96MT8 703 aa13.07□□□□□ -0.32
COL6A1-205ENST00000492851 GABRG3Q99928 467 aa13.07□□□□□ -0.32
COL6A1-205ENST00000492851 NUSAP1Q9BXS6 441 aaKnown RBP13.07□□□□□ -0.32
COL6A1-205ENST00000492851 SLC2A11Q9BYW1 496 aa13.07□□□□□ -0.32
COL6A1-205ENST00000492851 LRRC4Q9HBW1 653 aa13.07□□□□□ -0.32
COL6A1-205ENST00000492851 TMEM9BQ9NQ34 198 aa13.07□□□□□ -0.32
COL6A1-205ENST00000492851 RXFP3Q9NSD7 469 aa13.07□□□□□ -0.32
COL6A1-205ENST00000492851 MARCH2Q9P0N8 246 aa13.07□□□□□ -0.32
COL6A1-205ENST00000492851 RASAL2Q9UJF2 1139 aa13.07□□□□□ -0.32
COL6A1-205ENST00000492851 FBXO10Q9UK96 956 aa13.07□□□□□ -0.32
COL6A1-205ENST00000492851 SLC27A6Q9Y2P4 619 aa13.07□□□□□ -0.32
COL6A1-205ENST00000492851 C4orf47A7E2U8 309 aa13.06□□□□□ -0.32
COL6A1-205ENST00000492851 P4HA2O15460 535 aa13.06□□□□□ -0.32
COL6A1-205ENST00000492851 PAEPP09466 180 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms