RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 FAM217AQ8IXS0 508 aa8.82□□□□□ -1
SMARCB1-207ENST00000491967 SCML4Q8N228 414 aa8.82□□□□□ -1
SMARCB1-207ENST00000491967 ANKRD52Q8NB46 1076 aa8.82□□□□□ -1
SMARCB1-207ENST00000491967 RBBP8NLQ8NC74 664 aaPredicted RBP8.82□□□□□ -1
SMARCB1-207ENST00000491967 TATDN2Q93075 761 aa8.82□□□□□ -1
SMARCB1-207ENST00000491967 SLC35C1Q96A29 364 aa8.82□□□□□ -1
SMARCB1-207ENST00000491967 CCDC34Q96HJ3 373 aa8.82□□□□□ -1
SMARCB1-207ENST00000491967 TMEM176AQ96HP8 235 aa8.82□□□□□ -1
SMARCB1-207ENST00000491967 CDK5RAP1Q96SZ6 601 aaKnown RBP8.82□□□□□ -1
SMARCB1-207ENST00000491967 ARID3AQ99856 593 aa8.82□□□□□ -1
SMARCB1-207ENST00000491967 GABRG3Q99928 467 aa8.82□□□□□ -1
SMARCB1-207ENST00000491967 LSM14BQ9BX40 385 aaKnown RBP8.82□□□□□ -1
SMARCB1-207ENST00000491967 RMND1Q9NWS8 449 aa8.82□□□□□ -1
SMARCB1-207ENST00000491967 SLC27A6Q9Y2P4 619 aa8.82□□□□□ -1
SMARCB1-207ENST00000491967 CKAP5Q14008 2032 aa8.81□□□□□ -1
SMARCB1-207ENST00000491967 TBC1D3BA6NDS4 549 aa8.81□□□□□ -1
SMARCB1-207ENST00000491967 PRRT4C9JH25 899 aa8.81□□□□□ -1
SMARCB1-207ENST00000491967 GFRA2O00451 464 aa8.81□□□□□ -1
SMARCB1-207ENST00000491967 TRIM24O15164 1050 aa8.81□□□□□ -1
SMARCB1-207ENST00000491967 CAVIN2O95810 425 aa8.81□□□□□ -1
SMARCB1-207ENST00000491967 EPB41P11171 864 aaKnown RBP8.81□□□□□ -1
SMARCB1-207ENST00000491967 TYRP14679 529 aa8.81□□□□□ -1
SMARCB1-207ENST00000491967 CD58P19256 250 aa8.81□□□□□ -1
SMARCB1-207ENST00000491967 TIE1P35590 1138 aa8.81□□□□□ -1
SMARCB1-207ENST00000491967 NUCB2P80303 420 aa8.81□□□□□ -1
SMARCB1-207ENST00000491967 COG7P83436 770 aa8.81□□□□□ -1
SMARCB1-207ENST00000491967 ENPP2Q13822 863 aa8.81□□□□□ -1
SMARCB1-207ENST00000491967 CCDC6Q16204 474 aa8.81□□□□□ -1
SMARCB1-207ENST00000491967 CBWD6Q4V339 395 aa8.81□□□□□ -1
SMARCB1-207ENST00000491967 PPM1JQ5JR12 505 aa8.81□□□□□ -1
SMARCB1-207ENST00000491967 CBWD3Q5JTY5 395 aa8.81□□□□□ -1
SMARCB1-207ENST00000491967 CBWD5Q5RIA9 395 aa8.81□□□□□ -1
SMARCB1-207ENST00000491967 PEAR1Q5VY43 1037 aaPredicted RBP8.81□□□□□ -1
SMARCB1-207ENST00000491967 BTBD8Q5XKL5 378 aa8.81□□□□□ -1
SMARCB1-207ENST00000491967 ANO7Q6IWH7 933 aa8.81□□□□□ -1
SMARCB1-207ENST00000491967 TADA2BQ86TJ2 420 aa8.81□□□□□ -1
SMARCB1-207ENST00000491967 PIGZQ86VD9 579 aa8.81□□□□□ -1
SMARCB1-207ENST00000491967 TTC30AQ86WT1 665 aa8.81□□□□□ -1
SMARCB1-207ENST00000491967 CCDC150Q8NCX0 1101 aa8.81□□□□□ -1
SMARCB1-207ENST00000491967 LMO3Q8TAP4 145 aa8.81□□□□□ -1
SMARCB1-207ENST00000491967 EEF2KMTQ96G04 330 aa8.81□□□□□ -1
SMARCB1-207ENST00000491967 HEXIM2Q96MH2 286 aaKnown RBP8.81□□□□□ -1
SMARCB1-207ENST00000491967 DNAI2Q9GZS0 605 aa8.81□□□□□ -1
SMARCB1-207ENST00000491967 POLMQ9NP87 494 aaPredicted RBP8.81□□□□□ -1
SMARCB1-207ENST00000491967 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.81□□□□□ -1
SMARCB1-207ENST00000491967 EVLQ9UI08 416 aaPredicted RBP8.81□□□□□ -1
SMARCB1-207ENST00000491967 MBD1Q9UIS9 605 aaPredicted RBP8.81□□□□□ -1
SMARCB1-207ENST00000491967 KIAA1257Q9ULG3 409 aa8.81□□□□□ -1
SMARCB1-207ENST00000491967 ZNF510Q9Y2H8 683 aa8.81□□□□□ -1
SMARCB1-207ENST00000491967 KNL1Q8NG31 2342 aa8.81□□□□□ -1
SMARCB1-207ENST00000491967 CEP295Q9C0D2 2601 aa8.8□□□□□ -1
SMARCB1-207ENST00000491967 LNP1A1A4G5 178 aa8.8□□□□□ -1
SMARCB1-207ENST00000491967 CDX4O14627 284 aaPredicted RBP8.8□□□□□ -1
SMARCB1-207ENST00000491967 GABBR2O75899 941 aa8.8□□□□□ -1
SMARCB1-207ENST00000491967 ALDH1A2O94788 518 aa8.8□□□□□ -1
SMARCB1-207ENST00000491967 SMC2O95347 1197 aa8.8□□□□□ -1
SMARCB1-207ENST00000491967 GABRG2P18507 467 aa8.8□□□□□ -1
SMARCB1-207ENST00000491967 BMP6P22004 513 aa8.8□□□□□ -1
SMARCB1-207ENST00000491967 NTSR1P30989 418 aa8.8□□□□□ -1
SMARCB1-207ENST00000491967 HOXD12P35452 270 aa8.8□□□□□ -1
SMARCB1-207ENST00000491967 SHC2P98077 582 aa8.8□□□□□ -1
SMARCB1-207ENST00000491967 KDSRQ06136 332 aa8.8□□□□□ -1
SMARCB1-207ENST00000491967 GOLGA8FQ08AF8 430 aa8.8□□□□□ -1
SMARCB1-207ENST00000491967 GOLGA8DPQ0D2H9 430 aa8.8□□□□□ -1
SMARCB1-207ENST00000491967 CUL2Q13617 745 aa8.8□□□□□ -1
SMARCB1-207ENST00000491967 BYSLQ13895 437 aaKnown RBP8.8□□□□□ -1
SMARCB1-207ENST00000491967 TRIP4Q15650 581 aaPredicted RBP8.8□□□□□ -1
SMARCB1-207ENST00000491967 ANO4Q32M45 955 aa8.8□□□□□ -1
SMARCB1-207ENST00000491967 AASDHQ4L235 1098 aaPredicted RBP8.8□□□□□ -1
SMARCB1-207ENST00000491967 C10orf120Q5SQS8 335 aa8.8□□□□□ -1
SMARCB1-207ENST00000491967 FYB2Q5VWT5 728 aa8.8□□□□□ -1
SMARCB1-207ENST00000491967 RNF43Q68DV7 783 aa8.8□□□□□ -1
SMARCB1-207ENST00000491967 TCEAL6Q6IPX3 200 aa8.8□□□□□ -1
SMARCB1-207ENST00000491967 NUDT18Q6ZVK8 323 aa8.8□□□□□ -1
SMARCB1-207ENST00000491967 TRMT11Q7Z4G4 463 aaKnown RBP8.8□□□□□ -1
SMARCB1-207ENST00000491967 METTL3Q86U44 580 aaKnown RBP8.8□□□□□ -1
SMARCB1-207ENST00000491967 ARHGAP18Q8N392 663 aa8.8□□□□□ -1
SMARCB1-207ENST00000491967 CPXM2Q8N436 756 aa8.8□□□□□ -1
SMARCB1-207ENST00000491967 ZNF513Q8N8E2 541 aaPredicted RBP8.8□□□□□ -1
SMARCB1-207ENST00000491967 NAT16Q8N8M0 369 aa8.8□□□□□ -1
SMARCB1-207ENST00000491967 C12orf50Q8NA57 414 aaPredicted RBP8.8□□□□□ -1
SMARCB1-207ENST00000491967 KCTD13Q8WZ19 329 aa8.8□□□□□ -1
SMARCB1-207ENST00000491967 TCEAL3Q969E4 200 aa8.8□□□□□ -1
SMARCB1-207ENST00000491967 DHTKD1Q96HY7 919 aaPredicted RBP8.8□□□□□ -1
SMARCB1-207ENST00000491967 PIWIL1Q96J94 861 aaKnown RBP8.8□□□□□ -1
SMARCB1-207ENST00000491967 XPO6Q96QU8 1125 aaKnown RBP8.8□□□□□ -1
SMARCB1-207ENST00000491967 BBS2Q9BXC9 721 aa8.8□□□□□ -1
SMARCB1-207ENST00000491967 TPSD1Q9BZJ3 242 aa8.8□□□□□ -1
SMARCB1-207ENST00000491967 NACA2Q9H009 215 aa8.8□□□□□ -1
SMARCB1-207ENST00000491967 SMOC1Q9H4F8 434 aa8.8□□□□□ -1
SMARCB1-207ENST00000491967 STOML2Q9UJZ1 356 aa8.8□□□□□ -1
SMARCB1-207ENST00000491967 NAGPAQ9UK23 515 aa8.8□□□□□ -1
SMARCB1-207ENST00000491967 NUDT5Q9UKK9 219 aa8.8□□□□□ -1
SMARCB1-207ENST00000491967 INVSQ9Y283 1065 aa8.8□□□□□ -1
SMARCB1-207ENST00000491967 USP24Q9UPU5 2620 aa8.8□□□□□ -1
SMARCB1-207ENST00000491967 PCDH15Q96QU1 1955 aa8.79□□□□□ -1
SMARCB1-207ENST00000491967 PPP1R3GB7ZBB8 358 aa8.79□□□□□ -1
SMARCB1-207ENST00000491967 O00370 1275 aa8.79□□□□□ -1
SMARCB1-207ENST00000491967 XPO1O14980 1071 aaKnown RBP8.79□□□□□ -1
SMARCB1-207ENST00000491967 NPC1O15118 1278 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms