RNA–Protein interactions for RNA: ENST00000491860.1

NUP50-217, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-217ENST00000491860 NTSR1P30989 418 aa9.21□□□□□ -0.94
NUP50-217ENST00000491860 SLC6A11P48066 632 aa9.21□□□□□ -0.94
NUP50-217ENST00000491860 ZNF445P59923 1031 aa9.21□□□□□ -0.94
NUP50-217ENST00000491860 KDSRQ06136 332 aa9.21□□□□□ -0.94
NUP50-217ENST00000491860 PPP3CAQ08209 521 aa9.21□□□□□ -0.94
NUP50-217ENST00000491860 CETN1Q12798 172 aa9.21□□□□□ -0.94
NUP50-217ENST00000491860 LMAN2Q12907 356 aa9.21□□□□□ -0.94
NUP50-217ENST00000491860 C10orf120Q5SQS8 335 aa9.21□□□□□ -0.94
NUP50-217ENST00000491860 STPG1Q5TH74 334 aa9.21□□□□□ -0.94
NUP50-217ENST00000491860 ELOA2Q8IYF1 753 aaPredicted RBP9.21□□□□□ -0.94
NUP50-217ENST00000491860 PHTF2Q8N3S3 785 aa9.21□□□□□ -0.94
NUP50-217ENST00000491860 CCDC33Q8N5R6 958 aa9.21□□□□□ -0.94
NUP50-217ENST00000491860 ALLCQ8N6M5 410 aa9.21□□□□□ -0.94
NUP50-217ENST00000491860 OLIG1Q8TAK6 271 aa9.21□□□□□ -0.94
NUP50-217ENST00000491860 CEP76Q8TAP6 659 aa9.21□□□□□ -0.94
NUP50-217ENST00000491860 TMEM176AQ96HP8 235 aa9.21□□□□□ -0.94
NUP50-217ENST00000491860 TIGD1Q96MW7 591 aa9.21□□□□□ -0.94
NUP50-217ENST00000491860 EDEM2Q9BV94 578 aa9.21□□□□□ -0.94
NUP50-217ENST00000491860 BBS2Q9BXC9 721 aa9.21□□□□□ -0.94
NUP50-217ENST00000491860 MMRN2Q9H8L6 949 aa9.21□□□□□ -0.94
NUP50-217ENST00000491860 APOBEC3GQ9HC16 384 aaKnown RBP9.21□□□□□ -0.94
NUP50-217ENST00000491860 METTL14Q9HCE5 456 aaKnown RBP9.21□□□□□ -0.94
NUP50-217ENST00000491860 CISHQ9NSE2 258 aa9.21□□□□□ -0.94
NUP50-217ENST00000491860 OLA1Q9NTK5 396 aaKnown RBP9.21□□□□□ -0.94
NUP50-217ENST00000491860 HESX1Q9UBX0 185 aa9.21□□□□□ -0.94
NUP50-217ENST00000491860 HMGXB4Q9UGU5 601 aa9.21□□□□□ -0.94
NUP50-217ENST00000491860 EVLQ9UI08 416 aaPredicted RBP9.21□□□□□ -0.94
NUP50-217ENST00000491860 MAPK8IP1Q9UQF2 711 aa9.21□□□□□ -0.94
NUP50-217ENST00000491860 COQ4Q9Y3A0 265 aa9.21□□□□□ -0.94
NUP50-217ENST00000491860 USP3Q9Y6I4 520 aa9.21□□□□□ -0.94
NUP50-217ENST00000491860 LAMA1P25391 3075 aa9.2□□□□□ -0.94
NUP50-217ENST00000491860 CEP295Q9C0D2 2601 aa9.2□□□□□ -0.94
NUP50-217ENST00000491860 ABCA7Q8IZY2 2146 aa9.2□□□□□ -0.94
NUP50-217ENST00000491860 A0A1W2PQH9 124 aa9.2□□□□□ -0.94
NUP50-217ENST00000491860 TCRBV21S2A2A0A5A6 115 aa9.2□□□□□ -0.94
NUP50-217ENST00000491860 NEDD8-MDP1E9PL57 170 aa9.2□□□□□ -0.94
NUP50-217ENST00000491860 SGK1O00141 431 aa9.2□□□□□ -0.94
NUP50-217ENST00000491860 PSMA7O14818 248 aa9.2□□□□□ -0.94
NUP50-217ENST00000491860 CYP26A1O43174 497 aa9.2□□□□□ -0.94
NUP50-217ENST00000491860 AP5Z1O43299 807 aa9.2□□□□□ -0.94
NUP50-217ENST00000491860 CYBBP04839 570 aa9.2□□□□□ -0.94
NUP50-217ENST00000491860 IRF1P10914 325 aa9.2□□□□□ -0.94
NUP50-217ENST00000491860 TYRP14679 529 aa9.2□□□□□ -0.94
NUP50-217ENST00000491860 P2RY2P41231 377 aa9.2□□□□□ -0.94
NUP50-217ENST00000491860 DGKGP49619 791 aa9.2□□□□□ -0.94
NUP50-217ENST00000491860 ORC1Q13415 861 aa9.2□□□□□ -0.94
NUP50-217ENST00000491860 COL9A2Q14055 689 aaPredicted RBP9.2□□□□□ -0.94
NUP50-217ENST00000491860 STARD3Q14849 445 aa9.2□□□□□ -0.94
NUP50-217ENST00000491860 SF3A2Q15428 464 aaKnown RBP9.2□□□□□ -0.94
NUP50-217ENST00000491860 C10orf76Q5T2E6 689 aa9.2□□□□□ -0.94
NUP50-217ENST00000491860 PPP1R26Q5T8A7 1209 aaPredicted RBP9.2□□□□□ -0.94
NUP50-217ENST00000491860 TCERG1LQ5VWI1 586 aa9.2□□□□□ -0.94
NUP50-217ENST00000491860 ARHGAP17Q68EM7 881 aa9.2□□□□□ -0.94
NUP50-217ENST00000491860 FOXR2Q6PJQ5 311 aa9.2□□□□□ -0.94
NUP50-217ENST00000491860 C12orf40Q86WS4 652 aa9.2□□□□□ -0.94
NUP50-217ENST00000491860 TTC30AQ86WT1 665 aa9.2□□□□□ -0.94
NUP50-217ENST00000491860 TMEM25Q86YD3 366 aa9.2□□□□□ -0.94
NUP50-217ENST00000491860 PGBD3Q8N328 593 aa9.2□□□□□ -0.94
NUP50-217ENST00000491860 NAT16Q8N8M0 369 aa9.2□□□□□ -0.94
NUP50-217ENST00000491860 KDF1Q8NAX2 398 aaPredicted RBP9.2□□□□□ -0.94
NUP50-217ENST00000491860 ANKRD52Q8NB46 1076 aa9.2□□□□□ -0.94
NUP50-217ENST00000491860 UCMAQ8WVF2 138 aa9.2□□□□□ -0.94
NUP50-217ENST00000491860 SMARCE1Q969G3 411 aa9.2□□□□□ -0.94
NUP50-217ENST00000491860 CEP63Q96MT8 703 aa9.2□□□□□ -0.94
NUP50-217ENST00000491860 TWNKQ96RR1 684 aa9.2□□□□□ -0.94
NUP50-217ENST00000491860 LSM14BQ9BX40 385 aaKnown RBP9.2□□□□□ -0.94
NUP50-217ENST00000491860 NUSAP1Q9BXS6 441 aaKnown RBP9.2□□□□□ -0.94
NUP50-217ENST00000491860 IRX2Q9BZI1 471 aaPredicted RBP9.2□□□□□ -0.94
NUP50-217ENST00000491860 TPSD1Q9BZJ3 242 aa9.2□□□□□ -0.94
NUP50-217ENST00000491860 GOLPH3LQ9H4A5 285 aa9.2□□□□□ -0.94
NUP50-217ENST00000491860 TMEM9BQ9NQ34 198 aa9.2□□□□□ -0.94
NUP50-217ENST00000491860 DNAJC17Q9NVM6 304 aaKnown RBP9.2□□□□□ -0.94
NUP50-217ENST00000491860 ARMCX3Q9UH62 379 aaPredicted RBP9.2□□□□□ -0.94
NUP50-217ENST00000491860 PI4KAP42356 2102 aa9.19□□□□□ -0.94
NUP50-217ENST00000491860 DCLK1O15075 740 aa9.19□□□□□ -0.94
NUP50-217ENST00000491860 PMM2O15305 246 aa9.19□□□□□ -0.94
NUP50-217ENST00000491860 KCNK5O95279 499 aa9.19□□□□□ -0.94
NUP50-217ENST00000491860 SETSIPP0DME0 302 aa9.19□□□□□ -0.94
NUP50-217ENST00000491860 HOXB2P14652 356 aa9.19□□□□□ -0.94
NUP50-217ENST00000491860 HNRNPLP14866 589 aaKnown RBP eCLIP9.19□□□□□ -0.94
NUP50-217ENST00000491860 PRCPP42785 496 aa9.19□□□□□ -0.94
NUP50-217ENST00000491860 DHPSP49366 369 aaPredicted RBP9.19□□□□□ -0.94
NUP50-217ENST00000491860 BCAT1P54687 386 aa9.19□□□□□ -0.94
NUP50-217ENST00000491860 EIF4HQ15056 248 aaKnown RBP9.19□□□□□ -0.94
NUP50-217ENST00000491860 STILQ15468 1287 aa9.19□□□□□ -0.94
NUP50-217ENST00000491860 ZNF394Q53GI3 561 aa9.19□□□□□ -0.94
NUP50-217ENST00000491860 SGO2Q562F6 1265 aa9.19□□□□□ -0.94
NUP50-217ENST00000491860 DCAF17Q5H9S7 520 aaPredicted RBP9.19□□□□□ -0.94
NUP50-217ENST00000491860 RAB41Q5JT25 222 aa9.19□□□□□ -0.94
NUP50-217ENST00000491860 TMEM92Q6UXU6 159 aa9.19□□□□□ -0.94
NUP50-217ENST00000491860 Q6ZNB5 142 aa9.19□□□□□ -0.94
NUP50-217ENST00000491860 RSRC2Q7L4I2 434 aaKnown RBP9.19□□□□□ -0.94
NUP50-217ENST00000491860 GPRIN1Q7Z2K8 1008 aa9.19□□□□□ -0.94
NUP50-217ENST00000491860 SYT12Q8IV01 421 aa9.19□□□□□ -0.94
NUP50-217ENST00000491860 ZC3H3Q8IXZ2 948 aaKnown RBP9.19□□□□□ -0.94
NUP50-217ENST00000491860 CHPFQ8IZ52 775 aa9.19□□□□□ -0.94
NUP50-217ENST00000491860 FMR1NBQ8N0W7 255 aaPredicted RBP9.19□□□□□ -0.94
NUP50-217ENST00000491860 SCML4Q8N228 414 aa9.19□□□□□ -0.94
NUP50-217ENST00000491860 CPXM2Q8N436 756 aa9.19□□□□□ -0.94
NUP50-217ENST00000491860 ZNF557Q8N988 423 aaPredicted RBP9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms