RNA–Protein interactions for RNA: ENST00000491330.1

PDLIM2-217, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-217ENST00000491330 CREBRFQ8IUR6 639 aa17.39■□□□□ 0.37
PDLIM2-217ENST00000491330 ZNF513Q8N8E2 541 aaPredicted RBP17.39■□□□□ 0.37
PDLIM2-217ENST00000491330 TXNDC5Q8NBS9 432 aaKnown RBP17.39■□□□□ 0.37
PDLIM2-217ENST00000491330 UCMAQ8WVF2 138 aa17.39■□□□□ 0.37
PDLIM2-217ENST00000491330 ZC3H10Q96K80 434 aaKnown RBP17.39■□□□□ 0.37
PDLIM2-217ENST00000491330 ZFRQ96KR1 1074 aaKnown RBP17.39■□□□□ 0.37
PDLIM2-217ENST00000491330 CNOT6LQ96LI5 555 aaKnown RBP17.39■□□□□ 0.37
PDLIM2-217ENST00000491330 DLL3Q9NYJ7 618 aa17.39■□□□□ 0.37
PDLIM2-217ENST00000491330 KIAA1468Q9P260 1216 aa17.39■□□□□ 0.37
PDLIM2-217ENST00000491330 TSPAN16Q9UKR8 245 aa17.39■□□□□ 0.37
PDLIM2-217ENST00000491330 USP3Q9Y6I4 520 aa17.39■□□□□ 0.37
PDLIM2-217ENST00000491330 TYRP14679 529 aa17.38■□□□□ 0.37
PDLIM2-217ENST00000491330 PMS1P54277 932 aaKnown RBP17.38■□□□□ 0.37
PDLIM2-217ENST00000491330 EFEMP1Q12805 493 aa17.38■□□□□ 0.37
PDLIM2-217ENST00000491330 NAIF1Q69YI7 327 aaPredicted RBP17.38■□□□□ 0.37
PDLIM2-217ENST00000491330 SMYD5Q6GMV2 418 aa17.38■□□□□ 0.37
PDLIM2-217ENST00000491330 TMEM270Q6UE05 265 aa17.38■□□□□ 0.37
PDLIM2-217ENST00000491330 TMEM25Q86YD3 366 aa17.38■□□□□ 0.37
PDLIM2-217ENST00000491330 ALLCQ8N6M5 410 aa17.38■□□□□ 0.37
PDLIM2-217ENST00000491330 ARRDC1-AS1Q9H2J1 176 aa17.38■□□□□ 0.37
PDLIM2-217ENST00000491330 VPS45Q9NRW7 570 aa17.38■□□□□ 0.37
PDLIM2-217ENST00000491330 C2orf42Q9NWW7 574 aa17.38■□□□□ 0.37
PDLIM2-217ENST00000491330 MARCH2Q9P0N8 246 aa17.38■□□□□ 0.37
PDLIM2-217ENST00000491330 CTNND2Q9UQB3 1225 aa17.38■□□□□ 0.37
PDLIM2-217ENST00000491330 GOLGA6L22H0YM25 854 aa17.37■□□□□ 0.37
PDLIM2-217ENST00000491330 EPN2O95208 641 aa17.37■□□□□ 0.37
PDLIM2-217ENST00000491330 AFPP02771 609 aaKnown RBP17.37■□□□□ 0.37
PDLIM2-217ENST00000491330 DGKGP49619 791 aa17.37■□□□□ 0.37
PDLIM2-217ENST00000491330 ZNF445P59923 1031 aa17.37■□□□□ 0.37
PDLIM2-217ENST00000491330 ARID5AQ03989 594 aa17.37■□□□□ 0.37
PDLIM2-217ENST00000491330 KBTBD6Q86V97 674 aa17.37■□□□□ 0.37
PDLIM2-217ENST00000491330 CHPFQ8IZ52 775 aa17.37■□□□□ 0.37
PDLIM2-217ENST00000491330 TERB1Q8NA31 727 aa17.37■□□□□ 0.37
PDLIM2-217ENST00000491330 ARID3AQ99856 593 aa17.37■□□□□ 0.37
PDLIM2-217ENST00000491330 TRIM62Q9BVG3 475 aa17.37■□□□□ 0.37
PDLIM2-217ENST00000491330 SRRTQ9BXP5 876 aaKnown RBP17.37■□□□□ 0.37
PDLIM2-217ENST00000491330 NMUR1Q9HB89 426 aa17.37■□□□□ 0.37
PDLIM2-217ENST00000491330 ABCC13Q9NSE7 274 aa17.37■□□□□ 0.37
PDLIM2-217ENST00000491330 MARK1Q9P0L2 795 aa17.37■□□□□ 0.37
PDLIM2-217ENST00000491330 OBSL1O75147 1896 aa17.37■□□□□ 0.37
PDLIM2-217ENST00000491330 EP300Q09472 2414 aaPredicted RBP17.37■□□□□ 0.37
PDLIM2-217ENST00000491330 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.36■□□□□ 0.37
PDLIM2-217ENST00000491330 SLC12A8A0AV02 714 aa17.36■□□□□ 0.37
PDLIM2-217ENST00000491330 NPC1O15118 1278 aa17.36■□□□□ 0.37
PDLIM2-217ENST00000491330 SART1O43290 800 aaKnown RBP17.36■□□□□ 0.37
PDLIM2-217ENST00000491330 MED7O43513 233 aa17.36■□□□□ 0.37
PDLIM2-217ENST00000491330 CACNG3O60359 315 aa17.36■□□□□ 0.37
PDLIM2-217ENST00000491330 ZNF806P0C7X5 589 aa17.36■□□□□ 0.37
PDLIM2-217ENST00000491330 NTSR1P30989 418 aa17.36■□□□□ 0.37
PDLIM2-217ENST00000491330 MARSP56192 900 aaKnown RBP17.36■□□□□ 0.37
PDLIM2-217ENST00000491330 GCNT1Q02742 428 aa17.36■□□□□ 0.37
PDLIM2-217ENST00000491330 CREB5Q02930 508 aa17.36■□□□□ 0.37
PDLIM2-217ENST00000491330 PDE4CQ08493 712 aa17.36■□□□□ 0.37
PDLIM2-217ENST00000491330 KCNH2Q12809 1159 aa17.36■□□□□ 0.37
PDLIM2-217ENST00000491330 CNGA2Q16280 664 aa17.36■□□□□ 0.37
PDLIM2-217ENST00000491330 PLK5Q496M5 336 aa17.36■□□□□ 0.37
PDLIM2-217ENST00000491330 CT47A1Q5JQC4 288 aaPredicted RBP17.36■□□□□ 0.37
PDLIM2-217ENST00000491330 TTI2Q6NXR4 508 aa17.36■□□□□ 0.37
PDLIM2-217ENST00000491330 LPCAT2Q7L5N7 544 aa17.36■□□□□ 0.37
PDLIM2-217ENST00000491330 ENOSF1Q7L5Y1 443 aa17.36■□□□□ 0.37
PDLIM2-217ENST00000491330 IL17RCQ8NAC3 791 aa17.36■□□□□ 0.37
PDLIM2-217ENST00000491330 EHBP1Q8NDI1 1231 aa17.36■□□□□ 0.37
PDLIM2-217ENST00000491330 KCTD13Q8WZ19 329 aa17.36■□□□□ 0.37
PDLIM2-217ENST00000491330 PLD4Q96BZ4 506 aa17.36■□□□□ 0.37
PDLIM2-217ENST00000491330 TPSD1Q9BZJ3 242 aa17.36■□□□□ 0.37
PDLIM2-217ENST00000491330 CNGB3Q9NQW8 809 aa17.36■□□□□ 0.37
PDLIM2-217ENST00000491330 DACH1Q9UI36 760 aa17.36■□□□□ 0.37
PDLIM2-217ENST00000491330 NUDT5Q9UKK9 219 aa17.36■□□□□ 0.37
PDLIM2-217ENST00000491330 MYH10P35580 1976 aa17.36■□□□□ 0.37
PDLIM2-217ENST00000491330 PPP1R3GB7ZBB8 358 aa17.35■□□□□ 0.37
PDLIM2-217ENST00000491330 STC2O76061 302 aa17.35■□□□□ 0.37
PDLIM2-217ENST00000491330 HMBSP08397 361 aa17.35■□□□□ 0.37
PDLIM2-217ENST00000491330 CORO1AP31146 461 aaKnown RBP17.35■□□□□ 0.37
PDLIM2-217ENST00000491330 MPLP40238 635 aa17.35■□□□□ 0.37
PDLIM2-217ENST00000491330 MFAP3P55082 362 aa17.35■□□□□ 0.37
PDLIM2-217ENST00000491330 STX17P56962 302 aa17.35■□□□□ 0.37
PDLIM2-217ENST00000491330 STARD3Q14849 445 aa17.35■□□□□ 0.37
PDLIM2-217ENST00000491330 RAB41Q5JT25 222 aa17.35■□□□□ 0.37
PDLIM2-217ENST00000491330 PM20D1Q6GTS8 502 aa17.35■□□□□ 0.37
PDLIM2-217ENST00000491330 LCLAT1Q6UWP7 414 aa17.35■□□□□ 0.37
PDLIM2-217ENST00000491330 SCD5Q86SK9 330 aa17.35■□□□□ 0.37
PDLIM2-217ENST00000491330 RASSF3Q86WH2 238 aa17.35■□□□□ 0.37
PDLIM2-217ENST00000491330 CCDC117Q8IWD4 279 aaPredicted RBP17.35■□□□□ 0.37
PDLIM2-217ENST00000491330 ETFBKMTQ8IXQ9 262 aa17.35■□□□□ 0.37
PDLIM2-217ENST00000491330 MLKLQ8NB16 471 aa17.35■□□□□ 0.37
PDLIM2-217ENST00000491330 HMGB4Q8WW32 186 aa17.35■□□□□ 0.37
PDLIM2-217ENST00000491330 EZH1Q92800 747 aaPredicted RBP17.35■□□□□ 0.37
PDLIM2-217ENST00000491330 ULBP1Q9BZM6 244 aa17.35■□□□□ 0.37
PDLIM2-217ENST00000491330 OSER1Q9NX31 292 aa17.35■□□□□ 0.37
PDLIM2-217ENST00000491330 STARD13Q9Y3M8 1113 aa17.35■□□□□ 0.37
PDLIM2-217ENST00000491330 HBS1LQ9Y450 684 aaKnown RBP17.35■□□□□ 0.37
PDLIM2-217ENST00000491330 GVINP1Q7Z2Y8 2422 aa17.35■□□□□ 0.37
PDLIM2-217ENST00000491330 TCRBV21S2A2A0A5A6 115 aa17.34■□□□□ 0.37
PDLIM2-217ENST00000491330 ZNF217O75362 1048 aa17.34■□□□□ 0.37
PDLIM2-217ENST00000491330 FBXO21O94952 628 aa17.34■□□□□ 0.37
PDLIM2-217ENST00000491330 HOXB2P14652 356 aa17.34■□□□□ 0.37
PDLIM2-217ENST00000491330 CD44P16070 742 aaKnown RBP17.34■□□□□ 0.37
PDLIM2-217ENST00000491330 KIR2DL1P43626 348 aaPredicted RBP17.34■□□□□ 0.37
PDLIM2-217ENST00000491330 ZNF132P52740 706 aa17.34■□□□□ 0.37
PDLIM2-217ENST00000491330 SNX16P57768 344 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 107.4 ms