RNA–Protein interactions for RNA: ENST00000490833.5

FN1-223, Transcript of fibronectin 1, human

TSL 3

Gene FN1, Length 699 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FN1-223	ENST00000490833	TFAP2B	Q92481	460 aa		6.59	□□□□□ -1.35
FN1-223	ENST00000490833	PRCC	Q92733	491 aa	Predicted RBP	6.59	□□□□□ -1.35
FN1-223	ENST00000490833	INPP5D	Q92835	1189 aa		6.59	□□□□□ -1.35
FN1-223	ENST00000490833	FAF2	Q96CS3	445 aa		6.59	□□□□□ -1.35
FN1-223	ENST00000490833	FGD4	Q96M96	766 aa		6.59	□□□□□ -1.35
FN1-223	ENST00000490833	TMEM237	Q96Q45	408 aa		6.59	□□□□□ -1.35
FN1-223	ENST00000490833	CPXM1	Q96SM3	734 aa		6.59	□□□□□ -1.35
FN1-223	ENST00000490833	ELAC2	Q9BQ52	826 aa	Known RBP	6.59	□□□□□ -1.35
FN1-223	ENST00000490833	SEZ6L	Q9BYH1	1024 aa		6.59	□□□□□ -1.35
FN1-223	ENST00000490833	MMADHC	Q9H3L0	296 aa	Predicted RBP	6.59	□□□□□ -1.35
FN1-223	ENST00000490833	STN1	Q9H668	368 aa	Known RBP	6.59	□□□□□ -1.35
FN1-223	ENST00000490833	GBA2	Q9HCG7	927 aa	Predicted RBP	6.59	□□□□□ -1.35
FN1-223	ENST00000490833	EIF2B3	Q9NR50	452 aa	Known RBP	6.59	□□□□□ -1.35
FN1-223	ENST00000490833	METTL5	Q9NRN9	209 aa	Known RBP	6.59	□□□□□ -1.35
FN1-223	ENST00000490833	MKS1	Q9NXB0	559 aa		6.59	□□□□□ -1.35
FN1-223	ENST00000490833	NSMCE4A	Q9NXX6	385 aa		6.59	□□□□□ -1.35
FN1-223	ENST00000490833	FASTKD2	Q9NYY8	710 aa	Known RBP eCLIP	6.59	□□□□□ -1.35
FN1-223	ENST00000490833	XPO7	Q9UIA9	1087 aa	Known RBP	6.59	□□□□□ -1.35
FN1-223	ENST00000490833	SCAF8	Q9UPN6	1271 aa	Known RBP	6.59	□□□□□ -1.35
FN1-223	ENST00000490833	R3HDM2	Q9Y2K5	976 aa	Known RBP	6.59	□□□□□ -1.35
FN1-223	ENST00000490833	MTO1	Q9Y2Z2	717 aa	Known RBP	6.59	□□□□□ -1.35
FN1-223	ENST00000490833	EP400	Q96L91	3159 aa		6.59	□□□□□ -1.36
FN1-223	ENST00000490833	CCL15-CCL14	A0A0B4J2E2	113 aa		6.58	□□□□□ -1.36
FN1-223	ENST00000490833	SMIM23	A6NLE4	172 aa		6.58	□□□□□ -1.36
FN1-223	ENST00000490833	ADM5	C9JUS6	153 aa		6.58	□□□□□ -1.36
FN1-223	ENST00000490833	PI4K2B	G5E9Z4	385 aa		6.58	□□□□□ -1.36
FN1-223	ENST00000490833		I3L4J1	428 aa		6.58	□□□□□ -1.36
FN1-223	ENST00000490833	IGF2BP3	O00425	579 aa	Known RBP eCLIP	6.58	□□□□□ -1.36	7e-41	■□□□□ 8.1
FN1-223	ENST00000490833	PIR	O00625	290 aa		6.58	□□□□□ -1.36
FN1-223	ENST00000490833	TP73	O15350	636 aa		6.58	□□□□□ -1.36
FN1-223	ENST00000490833	BIRC5	O15392	142 aa		6.58	□□□□□ -1.36
FN1-223	ENST00000490833	RASSF9	O75901	435 aa		6.58	□□□□□ -1.36
FN1-223	ENST00000490833	ASMTL	O95671	621 aa		6.58	□□□□□ -1.36
FN1-223	ENST00000490833	F2	P00734	622 aa		6.58	□□□□□ -1.36
FN1-223	ENST00000490833	NFIC	P08651	508 aa		6.58	□□□□□ -1.36
FN1-223	ENST00000490833	NEFH	P12036	1026 aa		6.58	□□□□□ -1.36
FN1-223	ENST00000490833	KRT10	P13645	584 aa		6.58	□□□□□ -1.36
FN1-223	ENST00000490833	WARS	P23381	471 aa	Known RBP	6.58	□□□□□ -1.36
FN1-223	ENST00000490833	PCSK1	P29120	753 aa		6.58	□□□□□ -1.36
FN1-223	ENST00000490833	LRPAP1	P30533	357 aa		6.58	□□□□□ -1.36
FN1-223	ENST00000490833	SERPINB6	P35237	376 aa		6.58	□□□□□ -1.36
FN1-223	ENST00000490833	RPL22	P35268	128 aa	Known RBP	6.58	□□□□□ -1.36
FN1-223	ENST00000490833	GJC1	P36383	396 aa		6.58	□□□□□ -1.36
FN1-223	ENST00000490833	GARS	P41250	739 aa	Known RBP	6.58	□□□□□ -1.36
FN1-223	ENST00000490833	MATK	P42679	507 aa		6.58	□□□□□ -1.36
FN1-223	ENST00000490833	RAB27A	P51159	221 aa		6.58	□□□□□ -1.36
FN1-223	ENST00000490833	MMP16	P51512	607 aa		6.58	□□□□□ -1.36
FN1-223	ENST00000490833	HK2	P52789	917 aa		6.58	□□□□□ -1.36
FN1-223	ENST00000490833	OSTN	P61366	133 aa		6.58	□□□□□ -1.36
FN1-223	ENST00000490833	IGBP1	P78318	339 aa		6.58	□□□□□ -1.36
FN1-223	ENST00000490833	BASP1	P80723	227 aa	Known RBP	6.58	□□□□□ -1.36
FN1-223	ENST00000490833	COG7	P83436	770 aa		6.58	□□□□□ -1.36
FN1-223	ENST00000490833	TRIP13	Q15645	432 aa	Predicted RBP	6.58	□□□□□ -1.36
FN1-223	ENST00000490833	CCL15	Q16663	113 aa		6.58	□□□□□ -1.36
FN1-223	ENST00000490833	INSC	Q1MX18	579 aa		6.58	□□□□□ -1.36
FN1-223	ENST00000490833	PARP6	Q2NL67	630 aa		6.58	□□□□□ -1.36
FN1-223	ENST00000490833	SLC25A52	Q3SY17	297 aa		6.58	□□□□□ -1.36
FN1-223	ENST00000490833	ICE2	Q659A1	982 aa		6.58	□□□□□ -1.36
FN1-223	ENST00000490833	HEATR6	Q6AI08	1181 aa	Known RBP	6.58	□□□□□ -1.36
FN1-223	ENST00000490833	CYP4F22	Q6NT55	531 aa		6.58	□□□□□ -1.36
FN1-223	ENST00000490833	TIFAB	Q6ZNK6	161 aa		6.58	□□□□□ -1.36
FN1-223	ENST00000490833	PARP9	Q8IXQ6	854 aa		6.58	□□□□□ -1.36
FN1-223	ENST00000490833	LRRC34	Q8IZ02	419 aa		6.58	□□□□□ -1.36
FN1-223	ENST00000490833	SCML4	Q8N228	414 aa		6.58	□□□□□ -1.36
FN1-223	ENST00000490833	PLD5	Q8N7P1	536 aa		6.58	□□□□□ -1.36
FN1-223	ENST00000490833	OR6B3	Q8NGW1	331 aa		6.58	□□□□□ -1.36
FN1-223	ENST00000490833	CXorf38	Q8TB03	319 aa		6.58	□□□□□ -1.36
FN1-223	ENST00000490833	DENND1A	Q8TEH3	1009 aa		6.58	□□□□□ -1.36
FN1-223	ENST00000490833	TFB1M	Q8WVM0	346 aa	Known RBP	6.58	□□□□□ -1.36
FN1-223	ENST00000490833	IRGQ	Q8WZA9	623 aa		6.58	□□□□□ -1.36
FN1-223	ENST00000490833	HLA-C	Q95604	372 aa		6.58	□□□□□ -1.36
FN1-223	ENST00000490833	TTC17	Q96AE7	1141 aa		6.58	□□□□□ -1.36
FN1-223	ENST00000490833	MAML3	Q96JK9	1138 aa		6.58	□□□□□ -1.36
FN1-223	ENST00000490833	SNX27	Q96L92	541 aa		6.58	□□□□□ -1.36
FN1-223	ENST00000490833	UROC1	Q96N76	676 aa		6.58	□□□□□ -1.36
FN1-223	ENST00000490833	HNRNPAB	Q99729	332 aa	Known RBP	6.58	□□□□□ -1.36
FN1-223	ENST00000490833	TMEM121	Q9BTD3	319 aa		6.58	□□□□□ -1.36
FN1-223	ENST00000490833	DHRS4	Q9BTZ2	278 aa		6.58	□□□□□ -1.36
FN1-223	ENST00000490833	DDX23	Q9BUQ8	820 aa	Known RBP	6.58	□□□□□ -1.36
FN1-223	ENST00000490833	TRIM55	Q9BYV6	548 aa		6.58	□□□□□ -1.36
FN1-223	ENST00000490833	ELOVL4	Q9GZR5	314 aa		6.58	□□□□□ -1.36
FN1-223	ENST00000490833	ADAMTS10	Q9H324	1103 aa		6.58	□□□□□ -1.36
FN1-223	ENST00000490833	TXNRD2	Q9NNW7	524 aa		6.58	□□□□□ -1.36
FN1-223	ENST00000490833	STAU2	Q9NUL3	570 aa	Known RBP eCLIP	6.58	□□□□□ -1.36
FN1-223	ENST00000490833	EURL	Q9NYK6	297 aa		6.58	□□□□□ -1.36
FN1-223	ENST00000490833	FNIP2	Q9P278	1114 aa		6.58	□□□□□ -1.36
FN1-223	ENST00000490833	CHORDC1	Q9UHD1	332 aa	Predicted RBP	6.58	□□□□□ -1.36
FN1-223	ENST00000490833	MID2	Q9UJV3	735 aa		6.58	□□□□□ -1.36
FN1-223	ENST00000490833	TRHDE	Q9UKU6	1024 aa		6.58	□□□□□ -1.36
FN1-223	ENST00000490833	SLC12A4	Q9UP95	1085 aa		6.58	□□□□□ -1.36
FN1-223	ENST00000490833	SNX9	Q9Y5X1	595 aa		6.58	□□□□□ -1.36
FN1-223	ENST00000490833	PTCH2	Q9Y6C5	1203 aa		6.58	□□□□□ -1.36
FN1-223	ENST00000490833	SQOR	Q9Y6N5	450 aa		6.58	□□□□□ -1.36
FN1-223	ENST00000490833	GOLGA8Q	A0A0J9YX86	632 aa		6.57	□□□□□ -1.36
FN1-223	ENST00000490833	C17orf102	A2RUQ5	167 aa		6.57	□□□□□ -1.36
FN1-223	ENST00000490833	GOLGA8O	A6NCC3	632 aa		6.57	□□□□□ -1.36
FN1-223	ENST00000490833	SDR42E2	A6NKP2	422 aa		6.57	□□□□□ -1.36
FN1-223	ENST00000490833	POC1B-GALNT4	F8VUJ3	575 aa		6.57	□□□□□ -1.36
FN1-223	ENST00000490833	GOLGA8N	F8WBI6	632 aa		6.57	□□□□□ -1.36
FN1-223	ENST00000490833	TRIM66	O15016	1216 aa		6.57	□□□□□ -1.36

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