RNA–Protein interactions for RNA: ENST00000490751.1

LDB1-204, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 762 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-204ENST00000490751 TSTD1Q8NFU3 115 aa32.92■■■□□ 2.86
LDB1-204ENST00000490751 RNF225M0QZC1 329 aaPredicted RBP32.91■■■□□ 2.86
LDB1-204ENST00000490751 CHRM1P11229 460 aaPredicted RBP32.91■■■□□ 2.86
LDB1-204ENST00000490751 TIE1P35590 1138 aa32.91■■■□□ 2.86
LDB1-204ENST00000490751 TNFRSF4P43489 277 aa32.91■■■□□ 2.86
LDB1-204ENST00000490751 GCNT1Q02742 428 aa32.91■■■□□ 2.86
LDB1-204ENST00000490751 SPEM2Q0P670 501 aa32.91■■■□□ 2.86
LDB1-204ENST00000490751 ADIGQ0VDE8 80 aa32.91■■■□□ 2.86
LDB1-204ENST00000490751 EMC10Q5UCC4 262 aa32.91■■■□□ 2.86
LDB1-204ENST00000490751 LCLAT1Q6UWP7 414 aa32.91■■■□□ 2.86
LDB1-204ENST00000490751 TPGS1Q6ZTW0 290 aa32.91■■■□□ 2.86
LDB1-204ENST00000490751 RSRC2Q7L4I2 434 aaKnown RBP32.91■■■□□ 2.86
LDB1-204ENST00000490751 ALLCQ8N6M5 410 aa32.91■■■□□ 2.86
LDB1-204ENST00000490751 RBBP8NLQ8NC74 664 aaPredicted RBP32.91■■■□□ 2.86
LDB1-204ENST00000490751 NDRG1Q92597 394 aaKnown RBP32.91■■■□□ 2.86
LDB1-204ENST00000490751 RMDN1Q96DB5 314 aa32.91■■■□□ 2.86
LDB1-204ENST00000490751 BBS2Q9BXC9 721 aa32.91■■■□□ 2.86
LDB1-204ENST00000490751 EBF1Q9UH73 591 aa32.91■■■□□ 2.86
LDB1-204ENST00000490751 DMXL1Q9Y485 3027 aa32.91■■■□□ 2.86
LDB1-204ENST00000490751 SPAG17Q6Q759 2223 aa32.91■■■□□ 2.86
LDB1-204ENST00000490751 NEDD8-MDP1E9PL57 170 aa32.9■■■□□ 2.86
LDB1-204ENST00000490751 KIR2DL1P43626 348 aaPredicted RBP32.9■■■□□ 2.86
LDB1-204ENST00000490751 COG7P83436 770 aa32.9■■■□□ 2.86
LDB1-204ENST00000490751 PREPLQ4J6C6 727 aaPredicted RBP32.9■■■□□ 2.86
LDB1-204ENST00000490751 PKDCCQ504Y2 493 aa32.9■■■□□ 2.86
LDB1-204ENST00000490751 BHLHA9Q7RTU4 235 aa32.9■■■□□ 2.86
LDB1-204ENST00000490751 IL17RCQ8NAC3 791 aa32.9■■■□□ 2.86
LDB1-204ENST00000490751 TXNDC5Q8NBS9 432 aaKnown RBP32.9■■■□□ 2.86
LDB1-204ENST00000490751 INTS2Q9H0H0 1204 aaKnown RBP32.9■■■□□ 2.86
LDB1-204ENST00000490751 MARK1Q9P0L2 795 aa32.9■■■□□ 2.86
LDB1-204ENST00000490751 RALGAPA1Q6GYQ0 2036 aa32.9■■■□□ 2.86
LDB1-204ENST00000490751 TBC1D3BA6NDS4 549 aa32.89■■■□□ 2.86
LDB1-204ENST00000490751 KLF8O95600 359 aaPredicted RBP32.89■■■□□ 2.86
LDB1-204ENST00000490751 HMBSP08397 361 aa32.89■■■□□ 2.86
LDB1-204ENST00000490751 TYRP14679 529 aa32.89■■■□□ 2.86
LDB1-204ENST00000490751 CRY1Q16526 586 aa32.89■■■□□ 2.86
LDB1-204ENST00000490751 CACNA2D4Q7Z3S7 1137 aa32.89■■■□□ 2.86
LDB1-204ENST00000490751 SIX6OS1Q8N1H7 587 aa32.89■■■□□ 2.86
LDB1-204ENST00000490751 TERB1Q8NA31 727 aa32.89■■■□□ 2.86
LDB1-204ENST00000490751 KCTD13Q8WZ19 329 aa32.89■■■□□ 2.86
LDB1-204ENST00000490751 CNOT6LQ96LI5 555 aaKnown RBP32.89■■■□□ 2.86
LDB1-204ENST00000490751 IPO9Q96P70 1041 aaKnown RBP32.89■■■□□ 2.86
LDB1-204ENST00000490751 MED15Q96RN5 788 aa32.89■■■□□ 2.86
LDB1-204ENST00000490751 ZSWIM1Q9BR11 485 aa32.89■■■□□ 2.86
LDB1-204ENST00000490751 CLSTN2Q9H4D0 955 aa32.89■■■□□ 2.86
LDB1-204ENST00000490751 ZDHHC4Q9NPG8 344 aa32.89■■■□□ 2.86
LDB1-204ENST00000490751 DNAJC17Q9NVM6 304 aaKnown RBP32.89■■■□□ 2.86
LDB1-204ENST00000490751 MARCH2Q9P0N8 246 aa32.89■■■□□ 2.86
LDB1-204ENST00000490751 WDR35Q9P2L0 1181 aa32.89■■■□□ 2.86
LDB1-204ENST00000490751 STRIP2Q9ULQ0 834 aa32.89■■■□□ 2.86
LDB1-204ENST00000490751 WDR3Q9UNX4 943 aaKnown RBP eCLIP32.89■■■□□ 2.862e-11■□□□□ 9.7
LDB1-204ENST00000490751 TRIM24O15164 1050 aa32.88■■■□□ 2.85
LDB1-204ENST00000490751 CALCAP01258 141 aa32.88■■■□□ 2.85
LDB1-204ENST00000490751 KLKB1P03952 638 aa32.88■■■□□ 2.85
LDB1-204ENST00000490751 BRD2P25440 801 aaKnown RBP32.88■■■□□ 2.85
LDB1-204ENST00000490751 DGKEP52429 567 aa32.88■■■□□ 2.85
LDB1-204ENST00000490751 CNGA2Q16280 664 aa32.88■■■□□ 2.85
LDB1-204ENST00000490751 HSF5Q4G112 596 aaPredicted RBP32.88■■■□□ 2.85
LDB1-204ENST00000490751 GRAMD4Q6IC98 578 aa32.88■■■□□ 2.85
LDB1-204ENST00000490751 KBTBD6Q86V97 674 aa32.88■■■□□ 2.85
LDB1-204ENST00000490751 CREBRFQ8IUR6 639 aa32.88■■■□□ 2.85
LDB1-204ENST00000490751 KREMEN1Q96MU8 473 aa32.88■■■□□ 2.85
LDB1-204ENST00000490751 XPO6Q96QU8 1125 aaKnown RBP32.88■■■□□ 2.85
LDB1-204ENST00000490751 SGK1O00141 431 aa32.87■■■□□ 2.85
LDB1-204ENST00000490751 CACNG3O60359 315 aa32.87■■■□□ 2.85
LDB1-204ENST00000490751 LRP3O75074 770 aa32.87■■■□□ 2.85
LDB1-204ENST00000490751 ZNF132P52740 706 aa32.87■■■□□ 2.85
LDB1-204ENST00000490751 STILQ15468 1287 aa32.87■■■□□ 2.85
LDB1-204ENST00000490751 C10orf76Q5T2E6 689 aa32.87■■■□□ 2.85
LDB1-204ENST00000490751 ANO7Q6IWH7 933 aa32.87■■■□□ 2.85
LDB1-204ENST00000490751 ZNF510Q9Y2H8 683 aa32.87■■■□□ 2.85
LDB1-204ENST00000490751 DCHS1Q96JQ0 3298 aa32.87■■■□□ 2.85
LDB1-204ENST00000490751 SLC12A8A0AV02 714 aa32.86■■■□□ 2.85
LDB1-204ENST00000490751 M0QYV0 167 aa32.86■■■□□ 2.85
LDB1-204ENST00000490751 LCP1P13796 627 aa32.86■■■□□ 2.85
LDB1-204ENST00000490751 HNRNPLP14866 589 aaKnown RBP eCLIP32.86■■■□□ 2.85
LDB1-204ENST00000490751 CORO1AP31146 461 aaKnown RBP32.86■■■□□ 2.85
LDB1-204ENST00000490751 RGS7P49802 495 aa32.86■■■□□ 2.85
LDB1-204ENST00000490751 LMNB2Q03252 620 aa32.86■■■□□ 2.85
LDB1-204ENST00000490751 EOGTQ5NDL2 527 aa32.86■■■□□ 2.85
LDB1-204ENST00000490751 TMEM92Q6UXU6 159 aa32.86■■■□□ 2.85
LDB1-204ENST00000490751 NUDT18Q6ZVK8 323 aa32.86■■■□□ 2.85
LDB1-204ENST00000490751 MLKLQ8NB16 471 aa32.86■■■□□ 2.85
LDB1-204ENST00000490751 TPSD1Q9BZJ3 242 aa32.86■■■□□ 2.85
LDB1-204ENST00000490751 DCLK3Q9C098 648 aa32.86■■■□□ 2.85
LDB1-204ENST00000490751 CNGB3Q9NQW8 809 aa32.86■■■□□ 2.85
LDB1-204ENST00000490751 MYO18AQ92614 2054 aaKnown RBP32.86■■■□□ 2.85
LDB1-204ENST00000490751 RASSF3Q86WH2 238 aa32.85■■■□□ 2.85
LDB1-204ENST00000490751 SLC35F5Q8WV83 523 aa32.85■■■□□ 2.85
LDB1-204ENST00000490751 BHMTQ93088 406 aa32.85■■■□□ 2.85
LDB1-204ENST00000490751 OLA1Q9NTK5 396 aaKnown RBP32.85■■■□□ 2.85
LDB1-204ENST00000490751 SEMA4GQ9NTN9 838 aa32.85■■■□□ 2.85
LDB1-204ENST00000490751 CEP250Q9BV73 2442 aa32.85■■■□□ 2.85
LDB1-204ENST00000490751 YJEFN3A6XGL0 299 aa32.84■■■□□ 2.85
LDB1-204ENST00000490751 E7ENQ6 273 aa32.84■■■□□ 2.85
LDB1-204ENST00000490751 RSPO4Q2I0M5 234 aaPredicted RBP32.84■■■□□ 2.85
LDB1-204ENST00000490751 BSPRYQ5W0U4 402 aa32.84■■■□□ 2.85
LDB1-204ENST00000490751 PMF1Q6P1K2 205 aa32.84■■■□□ 2.85
LDB1-204ENST00000490751 ZNF513Q8N8E2 541 aaPredicted RBP32.84■■■□□ 2.85
LDB1-204ENST00000490751 MDGA1Q8NFP4 955 aa32.84■■■□□ 2.85
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms