RNA–Protein interactions for RNA: ENST00000490561.6

SNX12-205, Transcript of sorting nexin 12, humanhuman

TSL 1 (best)

Gene SNX12, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX12-205ENST00000490561 HADHQ16836 314 aaKnown RBP13.82□□□□□ -0.2
SNX12-205ENST00000490561 CTC1Q2NKJ3 1217 aa13.82□□□□□ -0.2
SNX12-205ENST00000490561 CCDC14Q49A88 953 aa13.82□□□□□ -0.2
SNX12-205ENST00000490561 C10orf120Q5SQS8 335 aa13.82□□□□□ -0.2
SNX12-205ENST00000490561 CES5AQ6NT32 575 aa13.82□□□□□ -0.2
SNX12-205ENST00000490561 PEX26Q7Z412 305 aa13.82□□□□□ -0.2
SNX12-205ENST00000490561 GPR149Q86SP6 731 aa13.82□□□□□ -0.2
SNX12-205ENST00000490561 LRRC57Q8N9N7 239 aa13.82□□□□□ -0.2
SNX12-205ENST00000490561 DQX1Q8TE96 717 aaKnown RBP13.82□□□□□ -0.2
SNX12-205ENST00000490561 EDEM1Q92611 657 aa13.82□□□□□ -0.2
SNX12-205ENST00000490561 CENPIQ92674 756 aaPredicted RBP13.82□□□□□ -0.2
SNX12-205ENST00000490561 RIPOR3Q96MK2 946 aa13.82□□□□□ -0.2
SNX12-205ENST00000490561 NACA2Q9H009 215 aa13.82□□□□□ -0.2
SNX12-205ENST00000490561 ATXN3LQ9H3M9 355 aa13.82□□□□□ -0.2
SNX12-205ENST00000490561 DNMT3BQ9UBC3 853 aaKnown RBP13.82□□□□□ -0.2
SNX12-205ENST00000490561 DNMT3LQ9UJW3 386 aa13.82□□□□□ -0.2
SNX12-205ENST00000490561 AMFRQ9UKV5 643 aa13.82□□□□□ -0.2
SNX12-205ENST00000490561 ALG6Q9Y672 507 aa13.82□□□□□ -0.2
SNX12-205ENST00000490561 MYO16Q9Y6X6 1858 aa13.82□□□□□ -0.2
SNX12-205ENST00000490561 GREB1Q4ZG55 1949 aa13.82□□□□□ -0.2
SNX12-205ENST00000490561 TMEM110-MUSTN1A8MSY1 372 aa13.81□□□□□ -0.2
SNX12-205ENST00000490561 ESPNB1AK53 854 aa13.81□□□□□ -0.2
SNX12-205ENST00000490561 M0QYT0 321 aa13.81□□□□□ -0.2
SNX12-205ENST00000490561 TADA3O75528 432 aa13.81□□□□□ -0.2
SNX12-205ENST00000490561 TRUB2O95900 331 aaKnown RBP13.81□□□□□ -0.2
SNX12-205ENST00000490561 OAS1P00973 400 aaKnown RBP13.81□□□□□ -0.2
SNX12-205ENST00000490561 SLC2A3P11169 496 aa13.81□□□□□ -0.2
SNX12-205ENST00000490561 GTF2F1P35269 517 aaKnown RBP eCLIP13.81□□□□□ -0.24e-7■■■■□ 22
SNX12-205ENST00000490561 AIF1P55008 147 aa13.81□□□□□ -0.2
SNX12-205ENST00000490561 GNG11P61952 73 aa13.81□□□□□ -0.2
SNX12-205ENST00000490561 OGDHQ02218 1023 aa13.81□□□□□ -0.2
SNX12-205ENST00000490561 ZNF569Q5MCW4 686 aa13.81□□□□□ -0.2
SNX12-205ENST00000490561 RARS2Q5T160 578 aaKnown RBP13.81□□□□□ -0.2
SNX12-205ENST00000490561 ACBD5Q5T8D3 534 aaPredicted RBP13.81□□□□□ -0.2
SNX12-205ENST00000490561 LRRC38Q5VT99 294 aa13.81□□□□□ -0.2
SNX12-205ENST00000490561 SYPL2Q5VXT5 272 aa13.81□□□□□ -0.2
SNX12-205ENST00000490561 TMC5Q6UXY8 1006 aa13.81□□□□□ -0.2
SNX12-205ENST00000490561 GAREM2Q75VX8 874 aa13.81□□□□□ -0.2
SNX12-205ENST00000490561 BNIPLQ7Z465 357 aa13.81□□□□□ -0.2
SNX12-205ENST00000490561 HS6ST3Q8IZP7 471 aa13.81□□□□□ -0.2
SNX12-205ENST00000490561 FAM172AQ8WUF8 416 aa13.81□□□□□ -0.2
SNX12-205ENST00000490561 BTBD6Q96KE9 485 aa13.81□□□□□ -0.2
SNX12-205ENST00000490561 CFAP57Q96MR6 1250 aa13.81□□□□□ -0.2
SNX12-205ENST00000490561 FAM161BQ96MY7 647 aa13.81□□□□□ -0.2
SNX12-205ENST00000490561 TBCBQ99426 244 aa13.81□□□□□ -0.2
SNX12-205ENST00000490561 TRIM7Q9C029 511 aa13.81□□□□□ -0.2
SNX12-205ENST00000490561 ADAM7Q9H2U9 754 aa13.81□□□□□ -0.2
SNX12-205ENST00000490561 OSER1Q9NX31 292 aa13.81□□□□□ -0.2
SNX12-205ENST00000490561 CLDND1Q9NY35 253 aa13.81□□□□□ -0.2
SNX12-205ENST00000490561 MARCH2Q9P0N8 246 aa13.81□□□□□ -0.2
SNX12-205ENST00000490561 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.81□□□□□ -0.2
SNX12-205ENST00000490561 HBS1LQ9Y450 684 aaKnown RBP13.81□□□□□ -0.2
SNX12-205ENST00000490561 JRKLQ9Y4A0 524 aa13.81□□□□□ -0.2
SNX12-205ENST00000490561 CAPN6Q9Y6Q1 641 aa13.81□□□□□ -0.2
SNX12-205ENST00000490561 CHD9Q3L8U1 2897 aa13.81□□□□□ -0.2
SNX12-205ENST00000490561 RANBP2P49792 3224 aaKnown RBP13.81□□□□□ -0.2
SNX12-205ENST00000490561 TRAV19A0A0A6YYK7 116 aa13.8□□□□□ -0.2
SNX12-205ENST00000490561 CCDC66A2RUB6 948 aa13.8□□□□□ -0.2
SNX12-205ENST00000490561 LINC01565O15544 149 aa13.8□□□□□ -0.2
SNX12-205ENST00000490561 IRAK2O43187 625 aa13.8□□□□□ -0.2
SNX12-205ENST00000490561 PSTPIP1O43586 416 aa13.8□□□□□ -0.2
SNX12-205ENST00000490561 PRPSAP2O60256 369 aa13.8□□□□□ -0.2
SNX12-205ENST00000490561 ZNF500O60304 480 aaPredicted RBP13.8□□□□□ -0.2
SNX12-205ENST00000490561 IGLV3-25P01717 112 aa13.8□□□□□ -0.2
SNX12-205ENST00000490561 KRT7P08729 469 aa13.8□□□□□ -0.2
SNX12-205ENST00000490561 COMTP21964 271 aa13.8□□□□□ -0.2
SNX12-205ENST00000490561 MTHFRP42898 656 aa13.8□□□□□ -0.2
SNX12-205ENST00000490561 ETF1P62495 437 aaKnown RBP13.8□□□□□ -0.2
SNX12-205ENST00000490561 COG7P83436 770 aa13.8□□□□□ -0.2
SNX12-205ENST00000490561 ATP11AP98196 1134 aa13.8□□□□□ -0.2
SNX12-205ENST00000490561 DEUP1Q05D60 604 aa13.8□□□□□ -0.2
SNX12-205ENST00000490561 ZNF252P-AS1Q0IIN9 211 aa13.8□□□□□ -0.2
SNX12-205ENST00000490561 TRIP4Q15650 581 aaPredicted RBP13.8□□□□□ -0.2
SNX12-205ENST00000490561 ARL13BQ3SXY8 428 aa13.8□□□□□ -0.2
SNX12-205ENST00000490561 PRSS36Q5K4E3 855 aa13.8□□□□□ -0.2
SNX12-205ENST00000490561 BRMS1LQ5PSV4 323 aa13.8□□□□□ -0.2
SNX12-205ENST00000490561 ATAT1Q5SQI0 421 aa13.8□□□□□ -0.2
SNX12-205ENST00000490561 TRNP1Q6NT89 227 aa13.8□□□□□ -0.2
SNX12-205ENST00000490561 CC2D1AQ6P1N0 951 aaPredicted RBP13.8□□□□□ -0.2
SNX12-205ENST00000490561 NYAP1Q6ZVC0 841 aa13.8□□□□□ -0.2
SNX12-205ENST00000490561 POLNQ7Z5Q5 900 aa13.8□□□□□ -0.2
SNX12-205ENST00000490561 GRASPQ7Z6J2 395 aaPredicted RBP13.8□□□□□ -0.2
SNX12-205ENST00000490561 TMEM150AQ86TG1 271 aa13.8□□□□□ -0.2
SNX12-205ENST00000490561 TAC4Q86UU9 113 aa13.8□□□□□ -0.2
SNX12-205ENST00000490561 DDX42Q86XP3 938 aaKnown RBP eCLIP13.8□□□□□ -0.2
SNX12-205ENST00000490561 PSTKQ8IV42 348 aaKnown RBP13.8□□□□□ -0.2
SNX12-205ENST00000490561 RHOT1Q8IXI2 618 aa13.8□□□□□ -0.2
SNX12-205ENST00000490561 C17orf53Q8N3J3 647 aaPredicted RBP13.8□□□□□ -0.2
SNX12-205ENST00000490561 UBL4BQ8N7F7 174 aa13.8□□□□□ -0.2
SNX12-205ENST00000490561 NECTIN4Q96NY8 510 aa13.8□□□□□ -0.2
SNX12-205ENST00000490561 CDX2Q99626 313 aaPredicted RBP13.8□□□□□ -0.2
SNX12-205ENST00000490561 TASP1Q9H6P5 420 aa13.8□□□□□ -0.2
SNX12-205ENST00000490561 HCFC1R1Q9NWW0 138 aa13.8□□□□□ -0.2
SNX12-205ENST00000490561 DDIT4Q9NX09 232 aa13.8□□□□□ -0.2
SNX12-205ENST00000490561 USTQ9Y2C2 406 aa13.8□□□□□ -0.2
SNX12-205ENST00000490561 TLR6Q9Y2C9 796 aa13.8□□□□□ -0.2
SNX12-205ENST00000490561 MRPS23Q9Y3D9 190 aaKnown RBP13.8□□□□□ -0.2
SNX12-205ENST00000490561 TRIOBPQ9H2D6 2365 aa13.79□□□□□ -0.2
SNX12-205ENST00000490561 A0A1W2PRU2 124 aa13.79□□□□□ -0.2
SNX12-205ENST00000490561 LRCH4O75427 683 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms