RNA–Protein interactions for RNA: ENST00000490399.5

PRPF4B-207, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 2

Gene PRPF4B, Length 576 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-207ENST00000490399 ELF2Q15723 593 aa5.24□□□□□ -1.57
PRPF4B-207ENST00000490399 P3H1Q32P28 736 aa5.24□□□□□ -1.57
PRPF4B-207ENST00000490399 AASDHQ4L235 1098 aaPredicted RBP5.24□□□□□ -1.57
PRPF4B-207ENST00000490399 TMEM196Q5HYL7 178 aa5.24□□□□□ -1.57
PRPF4B-207ENST00000490399 ZNF804AQ7Z570 1209 aa5.24□□□□□ -1.57
PRPF4B-207ENST00000490399 BCDIN3DQ7Z5W3 292 aaKnown RBP5.24□□□□□ -1.57
PRPF4B-207ENST00000490399 KRT73Q86Y46 540 aa5.24□□□□□ -1.57
PRPF4B-207ENST00000490399 RASGRP3Q8IV61 690 aa5.24□□□□□ -1.57
PRPF4B-207ENST00000490399 STYXQ8WUJ0 223 aa5.24□□□□□ -1.57
PRPF4B-207ENST00000490399 ARPC5LQ9BPX5 153 aa5.24□□□□□ -1.57
PRPF4B-207ENST00000490399 SAP30LQ9HAJ7 183 aa5.24□□□□□ -1.57
PRPF4B-207ENST00000490399 USP29Q9HBJ7 922 aa5.24□□□□□ -1.57
PRPF4B-207ENST00000490399 TMEM8AQ9HCN3 771 aa5.24□□□□□ -1.57
PRPF4B-207ENST00000490399 TRIM36Q9NQ86 728 aa5.24□□□□□ -1.57
PRPF4B-207ENST00000490399 FSCN3Q9NQT6 498 aa5.24□□□□□ -1.57
PRPF4B-207ENST00000490399 ASIC5Q9NY37 505 aa5.24□□□□□ -1.57
PRPF4B-207ENST00000490399 SCAF8Q9UPN6 1271 aaKnown RBP5.24□□□□□ -1.57
PRPF4B-207ENST00000490399 DTNAQ9Y4J8 743 aa5.24□□□□□ -1.57
PRPF4B-207ENST00000490399 PCDHB2Q9Y5E7 798 aa5.24□□□□□ -1.57
PRPF4B-207ENST00000490399 COMMD10Q9Y6G5 202 aa5.24□□□□□ -1.57
PRPF4B-207ENST00000490399 LGALS16A8MUM7 142 aa5.23□□□□□ -1.57
PRPF4B-207ENST00000490399 A8MVJ9 347 aa5.23□□□□□ -1.57
PRPF4B-207ENST00000490399 PCDH17O14917 1159 aa5.23□□□□□ -1.57
PRPF4B-207ENST00000490399 ASNA1O43681 348 aa5.23□□□□□ -1.57
PRPF4B-207ENST00000490399 JTBO76095 146 aa5.23□□□□□ -1.57
PRPF4B-207ENST00000490399 PDIA3P30101 505 aaKnown RBP5.23□□□□□ -1.57
PRPF4B-207ENST00000490399 TRAPPC10P48553 1259 aa5.23□□□□□ -1.57
PRPF4B-207ENST00000490399 RENBPP51606 427 aa5.23□□□□□ -1.57
PRPF4B-207ENST00000490399 SOX10P56693 466 aa5.23□□□□□ -1.57
PRPF4B-207ENST00000490399 PROK1P58294 105 aa5.23□□□□□ -1.57
PRPF4B-207ENST00000490399 HOXA4Q00056 320 aaPredicted RBP5.23□□□□□ -1.57
PRPF4B-207ENST00000490399 GALNT1Q10472 559 aaPredicted RBP5.23□□□□□ -1.57
PRPF4B-207ENST00000490399 PUM3Q15397 648 aaKnown RBP5.23□□□□□ -1.57
PRPF4B-207ENST00000490399 ST3GAL2Q16842 350 aa5.23□□□□□ -1.57
PRPF4B-207ENST00000490399 PFKFB4Q16877 469 aa5.23□□□□□ -1.57
PRPF4B-207ENST00000490399 TUBB8Q3ZCM7 444 aa5.23□□□□□ -1.57
PRPF4B-207ENST00000490399 AWAT1Q58HT5 328 aa5.23□□□□□ -1.57
PRPF4B-207ENST00000490399 PGBD2Q6P3X8 592 aa5.23□□□□□ -1.57
PRPF4B-207ENST00000490399 CCDC174Q6PII3 467 aa5.23□□□□□ -1.57
PRPF4B-207ENST00000490399 MTHFD1LQ6UB35 978 aa5.23□□□□□ -1.57
PRPF4B-207ENST00000490399 TRIM72Q6ZMU5 477 aa5.23□□□□□ -1.57
PRPF4B-207ENST00000490399 SFTPA1Q8IWL2 248 aa5.23□□□□□ -1.57
PRPF4B-207ENST00000490399 ATG16L2Q8NAA4 619 aa5.23□□□□□ -1.57
PRPF4B-207ENST00000490399 DAZAP1Q96EP5 407 aaKnown RBP5.23□□□□□ -1.57
PRPF4B-207ENST00000490399 VPS50Q96JG6 964 aa5.23□□□□□ -1.57
PRPF4B-207ENST00000490399 PRPF18Q99633 342 aaKnown RBP5.23□□□□□ -1.57
PRPF4B-207ENST00000490399 ZCWPW1Q9H0M4 648 aa5.23□□□□□ -1.57
PRPF4B-207ENST00000490399 SNX15Q9NRS6 342 aa5.23□□□□□ -1.57
PRPF4B-207ENST00000490399 AOX1Q06278 1338 aa5.23□□□□□ -1.57
PRPF4B-207ENST00000490399 OR2W5A6NFC9 320 aa5.22□□□□□ -1.57
PRPF4B-207ENST00000490399 NPC1O15118 1278 aa5.22□□□□□ -1.57
PRPF4B-207ENST00000490399 DHHO43323 396 aa5.22□□□□□ -1.57
PRPF4B-207ENST00000490399 TMPRSS11DO60235 418 aa5.22□□□□□ -1.57
PRPF4B-207ENST00000490399 PRAMEF2O60811 474 aa5.22□□□□□ -1.57
PRPF4B-207ENST00000490399 TAF5LO75529 589 aa5.22□□□□□ -1.57
PRPF4B-207ENST00000490399 ALADP13716 330 aa5.22□□□□□ -1.57
PRPF4B-207ENST00000490399 APEHP13798 732 aaKnown RBP5.22□□□□□ -1.57
PRPF4B-207ENST00000490399 ADRA1DP25100 572 aa5.22□□□□□ -1.57
PRPF4B-207ENST00000490399 KLRK1P26718 216 aa5.22□□□□□ -1.57
PRPF4B-207ENST00000490399 ELLP55199 621 aaPredicted RBP5.22□□□□□ -1.57
PRPF4B-207ENST00000490399 SPARCL1Q14515 664 aa5.22□□□□□ -1.57
PRPF4B-207ENST00000490399 GRM4Q14833 912 aa5.22□□□□□ -1.57
PRPF4B-207ENST00000490399 SERPINA13PQ6UXR4 307 aa5.22□□□□□ -1.57
PRPF4B-207ENST00000490399 PIK3AP1Q6ZUJ8 805 aa5.22□□□□□ -1.57
PRPF4B-207ENST00000490399 SNX18Q96RF0 628 aa5.22□□□□□ -1.57
PRPF4B-207ENST00000490399 PTPRHQ9HD43 1115 aa5.22□□□□□ -1.57
PRPF4B-207ENST00000490399 VPS45Q9NRW7 570 aa5.22□□□□□ -1.57
PRPF4B-207ENST00000490399 VPS4AQ9UN37 437 aa5.22□□□□□ -1.57
PRPF4B-207ENST00000490399 PNMA6EA0A0J9YXQ4 647 aa5.21□□□□□ -1.58
PRPF4B-207ENST00000490399 TCRBV5S1A1TA0A578 114 aa5.21□□□□□ -1.58
PRPF4B-207ENST00000490399 GOLGA6L3A6NEY3 463 aa5.21□□□□□ -1.58
PRPF4B-207ENST00000490399 MANSC4A6NHS7 340 aaPredicted RBP5.21□□□□□ -1.58
PRPF4B-207ENST00000490399 M0R3H8 397 aa5.21□□□□□ -1.58
PRPF4B-207ENST00000490399 GYS1P13807 737 aa5.21□□□□□ -1.58
PRPF4B-207ENST00000490399 GPC5P78333 572 aa5.21□□□□□ -1.58
PRPF4B-207ENST00000490399 TFF2Q03403 129 aa5.21□□□□□ -1.58
PRPF4B-207ENST00000490399 FAM83BQ5T0W9 1011 aa5.21□□□□□ -1.58
PRPF4B-207ENST00000490399 ARL6IP4Q66PJ3 421 aaKnown RBP5.21□□□□□ -1.58
PRPF4B-207ENST00000490399 FCRLBQ6BAA4 426 aa5.21□□□□□ -1.58
PRPF4B-207ENST00000490399 DPY19L2P1Q6NXN4 242 aa5.21□□□□□ -1.58
PRPF4B-207ENST00000490399 CHSY1Q86X52 802 aa5.21□□□□□ -1.58
PRPF4B-207ENST00000490399 MYLK4Q86YV6 388 aaPredicted RBP5.21□□□□□ -1.58
PRPF4B-207ENST00000490399 PNPLA1Q8N8W4 532 aa5.21□□□□□ -1.58
PRPF4B-207ENST00000490399 FAM71DQ8N9W8 422 aa5.21□□□□□ -1.58
PRPF4B-207ENST00000490399 OR1N1Q8NGS0 311 aa5.21□□□□□ -1.58
PRPF4B-207ENST00000490399 MAFAQ8NHW3 353 aaPredicted RBP5.21□□□□□ -1.58
PRPF4B-207ENST00000490399 MCRS1Q96EZ8 462 aa5.21□□□□□ -1.58
PRPF4B-207ENST00000490399 EDC3Q96F86 508 aaKnown RBP5.21□□□□□ -1.58
PRPF4B-207ENST00000490399 TFCP2L1Q9NZI6 479 aa5.21□□□□□ -1.58
PRPF4B-207ENST00000490399 PCDHB7Q9Y5E2 793 aa5.21□□□□□ -1.58
PRPF4B-207ENST00000490399 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5.2□□□□□ -1.58
PRPF4B-207ENST00000490399 M0QZQ0 153 aa5.2□□□□□ -1.58
PRPF4B-207ENST00000490399 TRIM38O00635 465 aa5.2□□□□□ -1.58
PRPF4B-207ENST00000490399 DNPH1O43598 174 aa5.2□□□□□ -1.58
PRPF4B-207ENST00000490399 NTSR2O95665 410 aa5.2□□□□□ -1.58
PRPF4B-207ENST00000490399 TMIGD3P0DMS9 266 aaPredicted RBP5.2□□□□□ -1.58
PRPF4B-207ENST00000490399 NPPBP16860 134 aa5.2□□□□□ -1.58
PRPF4B-207ENST00000490399 ZNF37AP17032 561 aaPredicted RBP5.2□□□□□ -1.58
PRPF4B-207ENST00000490399 AKT1P31749 480 aa5.2□□□□□ -1.58
PRPF4B-207ENST00000490399 GALNSP34059 522 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms