RNA–Protein interactions for RNA: ENST00000490278.1

CD46-216, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 747 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-216ENST00000490278 TP63Q9H3D4 680 aaPredicted RBP4.56□□□□□ -1.68
CD46-216ENST00000490278 SNX15Q9NRS6 342 aa4.56□□□□□ -1.68
CD46-216ENST00000490278 MGAT4CQ9UBM8 478 aa4.56□□□□□ -1.68
CD46-216ENST00000490278 GRHPRQ9UBQ7 328 aa4.56□□□□□ -1.68
CD46-216ENST00000490278 HERC5Q9UII4 1024 aaKnown RBP4.56□□□□□ -1.68
CD46-216ENST00000490278 ING1Q9UK53 422 aaPredicted RBP4.56□□□□□ -1.68
CD46-216ENST00000490278 ENTPD2Q9Y5L3 495 aa4.56□□□□□ -1.68
CD46-216ENST00000490278 MGST3O14880 152 aa4.55□□□□□ -1.68
CD46-216ENST00000490278 DHHO43323 396 aa4.55□□□□□ -1.68
CD46-216ENST00000490278 DNPH1O43598 174 aa4.55□□□□□ -1.68
CD46-216ENST00000490278 TAF5LO75529 589 aa4.55□□□□□ -1.68
CD46-216ENST00000490278 FGAP02671 866 aa4.55□□□□□ -1.68
CD46-216ENST00000490278 DRD1P21728 446 aa4.55□□□□□ -1.68
CD46-216ENST00000490278 DRD4P21917 467 aa4.55□□□□□ -1.68
CD46-216ENST00000490278 ADRA1DP25100 572 aa4.55□□□□□ -1.68
CD46-216ENST00000490278 MCM5P33992 734 aa4.55□□□□□ -1.68
CD46-216ENST00000490278 GSTM5P46439 218 aa4.55□□□□□ -1.68
CD46-216ENST00000490278 CACNA2D1P54289 1103 aa4.55□□□□□ -1.68
CD46-216ENST00000490278 KRTAP1-1Q07627 177 aa4.55□□□□□ -1.68
CD46-216ENST00000490278 KCNJ12Q14500 433 aa4.55□□□□□ -1.68
CD46-216ENST00000490278 GRM4Q14833 912 aa4.55□□□□□ -1.68
CD46-216ENST00000490278 P3H1Q32P28 736 aa4.55□□□□□ -1.68
CD46-216ENST00000490278 AASDHQ4L235 1098 aaPredicted RBP4.55□□□□□ -1.68
CD46-216ENST00000490278 TSTD2Q5T7W7 516 aa4.55□□□□□ -1.68
CD46-216ENST00000490278 GRHL2Q6ISB3 625 aa4.55□□□□□ -1.68
CD46-216ENST00000490278 RINT1Q6NUQ1 792 aa4.55□□□□□ -1.68
CD46-216ENST00000490278 KLHL17Q6TDP4 642 aa4.55□□□□□ -1.68
CD46-216ENST00000490278 RASAL3Q86YV0 1011 aa4.55□□□□□ -1.68
CD46-216ENST00000490278 P3H2Q8IVL5 708 aa4.55□□□□□ -1.68
CD46-216ENST00000490278 SFTPA1Q8IWL2 248 aa4.55□□□□□ -1.68
CD46-216ENST00000490278 CLASRPQ8N2M8 674 aaKnown RBP4.55□□□□□ -1.68
CD46-216ENST00000490278 WDR60Q8WVS4 1066 aa4.55□□□□□ -1.68
CD46-216ENST00000490278 TRAPPC12Q8WVT3 735 aa4.55□□□□□ -1.68
CD46-216ENST00000490278 RSC1A1Q92681 617 aa4.55□□□□□ -1.68
CD46-216ENST00000490278 POLR3GLQ9BT43 218 aa4.55□□□□□ -1.68
CD46-216ENST00000490278 THAP7Q9BT49 309 aaPredicted RBP4.55□□□□□ -1.68
CD46-216ENST00000490278 DUSP26Q9BV47 211 aa4.55□□□□□ -1.68
CD46-216ENST00000490278 TMEM120AQ9BXJ8 343 aa4.55□□□□□ -1.68
CD46-216ENST00000490278 ALG13Q9NP73 1137 aaKnown RBP4.55□□□□□ -1.68
CD46-216ENST00000490278 FSCN3Q9NQT6 498 aa4.55□□□□□ -1.68
CD46-216ENST00000490278 SLC17A6Q9P2U8 582 aa4.55□□□□□ -1.68
CD46-216ENST00000490278 LPAR3Q9UBY5 353 aa4.55□□□□□ -1.68
CD46-216ENST00000490278 PDE8BO95263 885 aa4.54□□□□□ -1.68
CD46-216ENST00000490278 VEGFAP15692 232 aaPredicted RBP4.54□□□□□ -1.68
CD46-216ENST00000490278 KLRK1P26718 216 aa4.54□□□□□ -1.68
CD46-216ENST00000490278 ITPKBP27987 946 aa4.54□□□□□ -1.68
CD46-216ENST00000490278 DIO1P49895 249 aa4.54□□□□□ -1.68
CD46-216ENST00000490278 PSG6Q00889 435 aa4.54□□□□□ -1.68
CD46-216ENST00000490278 DEUP1Q05D60 604 aa4.54□□□□□ -1.68
CD46-216ENST00000490278 SEMA3BQ13214 749 aa4.54□□□□□ -1.68
CD46-216ENST00000490278 PRKG1Q13976 671 aa4.54□□□□□ -1.68
CD46-216ENST00000490278 ATPAF1Q5TC12 328 aaPredicted RBP4.54□□□□□ -1.68
CD46-216ENST00000490278 FAM90A2PQ658T7 463 aa4.54□□□□□ -1.68
CD46-216ENST00000490278 TANGO2Q6ICL3 276 aa4.54□□□□□ -1.68
CD46-216ENST00000490278 SULT6B1Q6IMI4 303 aa4.54□□□□□ -1.68
CD46-216ENST00000490278 LIN54Q6MZP7 749 aa4.54□□□□□ -1.68
CD46-216ENST00000490278 MSANTD2Q6P1R3 559 aa4.54□□□□□ -1.68
CD46-216ENST00000490278 OLFML1Q6UWY5 402 aa4.54□□□□□ -1.68
CD46-216ENST00000490278 PIK3AP1Q6ZUJ8 805 aa4.54□□□□□ -1.68
CD46-216ENST00000490278 SLC29A4Q7RTT9 530 aa4.54□□□□□ -1.68
CD46-216ENST00000490278 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.54□□□□□ -1.68
CD46-216ENST00000490278 PNPLA1Q8N8W4 532 aa4.54□□□□□ -1.68
CD46-216ENST00000490278 SLC16A11Q8NCK7 471 aa4.54□□□□□ -1.68
CD46-216ENST00000490278 SIMC1Q8NDZ2 872 aa4.54□□□□□ -1.68
CD46-216ENST00000490278 OR1N1Q8NGS0 311 aa4.54□□□□□ -1.68
CD46-216ENST00000490278 GPR150Q8NGU9 434 aa4.54□□□□□ -1.68
CD46-216ENST00000490278 STT3BQ8TCJ2 826 aa4.54□□□□□ -1.68
CD46-216ENST00000490278 OVCA2Q8WZ82 227 aa4.54□□□□□ -1.68
CD46-216ENST00000490278 UROC1Q96N76 676 aa4.54□□□□□ -1.68
CD46-216ENST00000490278 EIF3CQ99613 913 aaKnown RBP4.54□□□□□ -1.68
CD46-216ENST00000490278 TIMP4Q99727 224 aa4.54□□□□□ -1.68
CD46-216ENST00000490278 RTKNQ9BST9 563 aa4.54□□□□□ -1.68
CD46-216ENST00000490278 SORBS1Q9BX66 1292 aaKnown RBP4.54□□□□□ -1.68
CD46-216ENST00000490278 RXFP3Q9NSD7 469 aa4.54□□□□□ -1.68
CD46-216ENST00000490278 TLK1Q9UKI8 766 aa4.54□□□□□ -1.68
CD46-216ENST00000490278 ASAP1Q9ULH1 1129 aa4.54□□□□□ -1.68
CD46-216ENST00000490278 DMRT1Q9Y5R6 373 aa4.54□□□□□ -1.68
CD46-216ENST00000490278 CTIFO43310 598 aaKnown RBP4.53□□□□□ -1.68
CD46-216ENST00000490278 CA12O43570 354 aa4.53□□□□□ -1.68
CD46-216ENST00000490278 ACTL6BO94805 426 aa4.53□□□□□ -1.68
CD46-216ENST00000490278 GYS1P13807 737 aa4.53□□□□□ -1.68
CD46-216ENST00000490278 ZNF37AP17032 561 aaPredicted RBP4.53□□□□□ -1.68
CD46-216ENST00000490278 WT1P19544 449 aaPredicted RBP4.53□□□□□ -1.68
CD46-216ENST00000490278 MMP8P22894 467 aa4.53□□□□□ -1.68
CD46-216ENST00000490278 FPR3P25089 353 aa4.53□□□□□ -1.68
CD46-216ENST00000490278 AKT1P31749 480 aa4.53□□□□□ -1.68
CD46-216ENST00000490278 SOX10P56693 466 aa4.53□□□□□ -1.68
CD46-216ENST00000490278 AP2B1P63010 937 aa4.53□□□□□ -1.68
CD46-216ENST00000490278 TXNL4AP83876 142 aaKnown RBP4.53□□□□□ -1.68
CD46-216ENST00000490278 LMAN2Q12907 356 aa4.53□□□□□ -1.68
CD46-216ENST00000490278 BFSP2Q13515 415 aa4.53□□□□□ -1.68
CD46-216ENST00000490278 DNASE1L3Q13609 305 aa4.53□□□□□ -1.68
CD46-216ENST00000490278 RNASE12Q5GAN4 147 aaKnown RBP4.53□□□□□ -1.68
CD46-216ENST00000490278 AKNAD1Q5T1N1 836 aa4.53□□□□□ -1.68
CD46-216ENST00000490278 CCDC144NLQ6NUI1 221 aa4.53□□□□□ -1.68
CD46-216ENST00000490278 CEP85Q6P2H3 762 aa4.53□□□□□ -1.68
CD46-216ENST00000490278 PCSK4Q6UW60 755 aa4.53□□□□□ -1.68
CD46-216ENST00000490278 KIRREL2Q6UWL6 708 aa4.53□□□□□ -1.68
CD46-216ENST00000490278 NAPRTQ6XQN6 538 aa4.53□□□□□ -1.68
CD46-216ENST00000490278 SLC44A2Q8IWA5 706 aaPredicted RBP4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms