RNA–Protein interactions for RNA: ENST00000490062.1

ERCC3-207, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 4

Gene ERCC3, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-207ENST00000490062 TC2NQ8N9U0 490 aa18.25■□□□□ 0.51
ERCC3-207ENST00000490062 SH3RF2Q8TEC5 729 aa18.25■□□□□ 0.51
ERCC3-207ENST00000490062 DNASE1L2Q92874 299 aa18.25■□□□□ 0.51
ERCC3-207ENST00000490062 PIWIL1Q96J94 861 aaKnown RBP18.25■□□□□ 0.51
ERCC3-207ENST00000490062 TRMT61BQ9BVS5 477 aaKnown RBP18.25■□□□□ 0.51
ERCC3-207ENST00000490062 SMG9Q9H0W8 520 aaKnown RBP18.25■□□□□ 0.51
ERCC3-207ENST00000490062 ISCUQ9H1K1 167 aa18.25■□□□□ 0.51
ERCC3-207ENST00000490062 SMOC2Q9H3U7 446 aa18.25■□□□□ 0.51
ERCC3-207ENST00000490062 SYNCQ9H7C4 482 aa18.25■□□□□ 0.51
ERCC3-207ENST00000490062 NENFQ9UMX5 172 aa18.25■□□□□ 0.51
ERCC3-207ENST00000490062 HBS1LQ9Y450 684 aaKnown RBP18.25■□□□□ 0.51
ERCC3-207ENST00000490062 TCRBV5S1A1TA0A578 114 aa18.24■□□□□ 0.51
ERCC3-207ENST00000490062 GREM1O60565 184 aa18.24■□□□□ 0.51
ERCC3-207ENST00000490062 TBX18O95935 607 aa18.24■□□□□ 0.51
ERCC3-207ENST00000490062 IGLV3-25P01717 112 aa18.24■□□□□ 0.51
ERCC3-207ENST00000490062 KPNA1P52294 538 aaPredicted RBP18.24■□□□□ 0.51
ERCC3-207ENST00000490062 MLLT6P55198 1093 aaPredicted RBP18.24■□□□□ 0.51
ERCC3-207ENST00000490062 MTF1Q14872 753 aa18.24■□□□□ 0.51
ERCC3-207ENST00000490062 TDRD12Q587J7 1177 aaKnown RBP18.24■□□□□ 0.51
ERCC3-207ENST00000490062 OR6B2Q6IFH4 312 aa18.24■□□□□ 0.51
ERCC3-207ENST00000490062 HTR3DQ70Z44 454 aa18.24■□□□□ 0.51
ERCC3-207ENST00000490062 RNF139Q8WU17 664 aa18.24■□□□□ 0.51
ERCC3-207ENST00000490062 NT5C3BQ969T7 300 aa18.24■□□□□ 0.51
ERCC3-207ENST00000490062 OTUB2Q96DC9 234 aa18.24■□□□□ 0.51
ERCC3-207ENST00000490062 FAM83CQ9BQN1 747 aa18.24■□□□□ 0.51
ERCC3-207ENST00000490062 COL25A1Q9BXS0 654 aaPredicted RBP18.24■□□□□ 0.51
ERCC3-207ENST00000490062 ZNHIT6Q9NWK9 470 aaKnown RBP18.24■□□□□ 0.51
ERCC3-207ENST00000490062 THG1LQ9NWX6 298 aaKnown RBP18.24■□□□□ 0.51
ERCC3-207ENST00000490062 RRN3Q9NYV6 651 aa18.24■□□□□ 0.51
ERCC3-207ENST00000490062 MARCH2Q9P0N8 246 aa18.24■□□□□ 0.51
ERCC3-207ENST00000490062 IMPACTQ9P2X3 320 aa18.24■□□□□ 0.51
ERCC3-207ENST00000490062 TMEM59LQ9UK28 342 aa18.24■□□□□ 0.51
ERCC3-207ENST00000490062 BDP1A6H8Y1 2624 aa18.24■□□□□ 0.51
ERCC3-207ENST00000490062 COL4A2P08572 1712 aa18.23■□□□□ 0.51
ERCC3-207ENST00000490062 DCXO43602 365 aa18.23■□□□□ 0.51
ERCC3-207ENST00000490062 DAB1O75553 588 aa18.23■□□□□ 0.51
ERCC3-207ENST00000490062 ADCY5O95622 1261 aa18.23■□□□□ 0.51
ERCC3-207ENST00000490062 IGLV3-27P01718 113 aa18.23■□□□□ 0.51
ERCC3-207ENST00000490062 ADKP55263 362 aaKnown RBP18.23■□□□□ 0.51
ERCC3-207ENST00000490062 PFKPQ01813 784 aa18.23■□□□□ 0.51
ERCC3-207ENST00000490062 RING1Q06587 406 aa18.23■□□□□ 0.51
ERCC3-207ENST00000490062 GOLGA8FQ08AF8 430 aa18.23■□□□□ 0.51
ERCC3-207ENST00000490062 GOLGA8DPQ0D2H9 430 aa18.23■□□□□ 0.51
ERCC3-207ENST00000490062 TRIP4Q15650 581 aaPredicted RBP18.23■□□□□ 0.51
ERCC3-207ENST00000490062 TSR1Q2NL82 804 aaKnown RBP18.23■□□□□ 0.51
ERCC3-207ENST00000490062 MMS22LQ6ZRQ5 1243 aa18.23■□□□□ 0.51
ERCC3-207ENST00000490062 RSRC2Q7L4I2 434 aaKnown RBP18.23■□□□□ 0.51
ERCC3-207ENST00000490062 MCOLN2Q8IZK6 566 aa18.23■□□□□ 0.51
ERCC3-207ENST00000490062 C3orf20Q8ND61 904 aa18.23■□□□□ 0.51
ERCC3-207ENST00000490062 IRF7Q92985 503 aa18.23■□□□□ 0.51
ERCC3-207ENST00000490062 FAM149B1Q96BN6 582 aa18.23■□□□□ 0.51
ERCC3-207ENST00000490062 C11orf70Q9BRQ4 267 aa18.23■□□□□ 0.51
ERCC3-207ENST00000490062 NACA2Q9H009 215 aa18.23■□□□□ 0.51
ERCC3-207ENST00000490062 ADAM22Q9P0K1 906 aa18.23■□□□□ 0.51
ERCC3-207ENST00000490062 MUTYHQ9UIF7 546 aa18.23■□□□□ 0.51
ERCC3-207ENST00000490062 PI4K2BG5E9Z4 385 aa18.22■□□□□ 0.51
ERCC3-207ENST00000490062 SLC9A3R1O14745 358 aaPredicted RBP18.22■□□□□ 0.51
ERCC3-207ENST00000490062 RTN2O75298 545 aa18.22■□□□□ 0.51
ERCC3-207ENST00000490062 PLEKP08567 350 aaPredicted RBP18.22■□□□□ 0.51
ERCC3-207ENST00000490062 NCAM1P13591 858 aa18.22■□□□□ 0.51
ERCC3-207ENST00000490062 ALADP13716 330 aa18.22■□□□□ 0.51
ERCC3-207ENST00000490062 NOS2P35228 1153 aa18.22■□□□□ 0.51
ERCC3-207ENST00000490062 GPC5P78333 572 aa18.22■□□□□ 0.51
ERCC3-207ENST00000490062 ZXDAP98168 799 aa18.22■□□□□ 0.51
ERCC3-207ENST00000490062 PDGFRLQ15198 375 aa18.22■□□□□ 0.51
ERCC3-207ENST00000490062 TAF5Q15542 800 aa18.22■□□□□ 0.51
ERCC3-207ENST00000490062 Q6ZNB5 142 aa18.22■□□□□ 0.51
ERCC3-207ENST00000490062 DQX1Q8TE96 717 aaKnown RBP18.22■□□□□ 0.51
ERCC3-207ENST00000490062 OSCP1Q8WVF1 389 aa18.22■□□□□ 0.51
ERCC3-207ENST00000490062 EDEM1Q92611 657 aa18.22■□□□□ 0.51
ERCC3-207ENST00000490062 PLD4Q96BZ4 506 aa18.22■□□□□ 0.51
ERCC3-207ENST00000490062 PGAP3Q96FM1 320 aaPredicted RBP18.22■□□□□ 0.51
ERCC3-207ENST00000490062 SERPINB11Q96P15 392 aa18.22■□□□□ 0.51
ERCC3-207ENST00000490062 PANX2Q96RD6 677 aa18.22■□□□□ 0.51
ERCC3-207ENST00000490062 SEPT11Q9NVA2 429 aaKnown RBP18.22■□□□□ 0.51
ERCC3-207ENST00000490062 TAS2R14Q9NYV8 317 aa18.22■□□□□ 0.51
ERCC3-207ENST00000490062 TBC1D14Q9P2M4 693 aa18.22■□□□□ 0.51
ERCC3-207ENST00000490062 WNT16Q9UBV4 365 aa18.22■□□□□ 0.51
ERCC3-207ENST00000490062 ADAMTS1Q9UHI8 967 aa18.22■□□□□ 0.51
ERCC3-207ENST00000490062 NUDT5Q9UKK9 219 aa18.22■□□□□ 0.51
ERCC3-207ENST00000490062 NAALADL1Q9UQQ1 740 aa18.22■□□□□ 0.51
ERCC3-207ENST00000490062 MUC3AQ02505 3323 aa18.22■□□□□ 0.51
ERCC3-207ENST00000490062 TNFRSF10AO00220 468 aa18.21■□□□□ 0.51
ERCC3-207ENST00000490062 ZNF263O14978 683 aa18.21■□□□□ 0.51
ERCC3-207ENST00000490062 MDM4O15151 490 aa18.21■□□□□ 0.51
ERCC3-207ENST00000490062 STC2O76061 302 aa18.21■□□□□ 0.51
ERCC3-207ENST00000490062 LATS1O95835 1130 aa18.21■□□□□ 0.51
ERCC3-207ENST00000490062 MATKP42679 507 aa18.21■□□□□ 0.51
ERCC3-207ENST00000490062 EFEMP1Q12805 493 aa18.21■□□□□ 0.51
ERCC3-207ENST00000490062 SLC18A3Q16572 532 aa18.21■□□□□ 0.51
ERCC3-207ENST00000490062 PPP1R15BQ5SWA1 713 aa18.21■□□□□ 0.51
ERCC3-207ENST00000490062 FAM102AQ5T9C2 384 aaPredicted RBP18.21■□□□□ 0.51
ERCC3-207ENST00000490062 SYPL2Q5VXT5 272 aa18.21■□□□□ 0.51
ERCC3-207ENST00000490062 BNIPLQ7Z465 357 aa18.21■□□□□ 0.51
ERCC3-207ENST00000490062 YAF2Q8IY57 180 aa18.21■□□□□ 0.51
ERCC3-207ENST00000490062 DEFB106AQ8N104 65 aa18.21■□□□□ 0.51
ERCC3-207ENST00000490062 EDAQ92838 391 aa18.21■□□□□ 0.51
ERCC3-207ENST00000490062 TRIM11Q96F44 468 aa18.21■□□□□ 0.51
ERCC3-207ENST00000490062 SLC39A13Q96H72 371 aa18.21■□□□□ 0.51
ERCC3-207ENST00000490062 NPY6RQ99463 290 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms