RNA–Protein interactions for RNA: ENST00000489961.1

VPS13D-210, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-210ENST00000489961 SPTBN5Q9NRC6 3674 aaKnown RBP11.38□□□□□ -0.59
VPS13D-210ENST00000489961 GOLGA6L3A6NEY3 463 aa11.37□□□□□ -0.59
VPS13D-210ENST00000489961 GOLGA8SH3BPF8 625 aa11.37□□□□□ -0.59
VPS13D-210ENST00000489961 DDX3XO00571 662 aaKnown RBP eCLIP11.37□□□□□ -0.59
VPS13D-210ENST00000489961 MDM4O15151 490 aa11.37□□□□□ -0.59
VPS13D-210ENST00000489961 CHADO15335 359 aa11.37□□□□□ -0.59
VPS13D-210ENST00000489961 DCXO43602 365 aa11.37□□□□□ -0.59
VPS13D-210ENST00000489961 GZMAP12544 262 aa11.37□□□□□ -0.59
VPS13D-210ENST00000489961 ALADP13716 330 aa11.37□□□□□ -0.59
VPS13D-210ENST00000489961 GDI1P31150 447 aa11.37□□□□□ -0.59
VPS13D-210ENST00000489961 PFKPQ01813 784 aa11.37□□□□□ -0.59
VPS13D-210ENST00000489961 C1QBPQ07021 282 aaKnown RBP11.37□□□□□ -0.59
VPS13D-210ENST00000489961 FCHO2Q0JRZ9 810 aa11.37□□□□□ -0.59
VPS13D-210ENST00000489961 FAM102AQ5T9C2 384 aaPredicted RBP11.37□□□□□ -0.59
VPS13D-210ENST00000489961 MSANTD2Q6P1R3 559 aa11.37□□□□□ -0.59
VPS13D-210ENST00000489961 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.37□□□□□ -0.59
VPS13D-210ENST00000489961 KIAA1958Q8N8K9 716 aa11.37□□□□□ -0.59
VPS13D-210ENST00000489961 IRF7Q92985 503 aa11.37□□□□□ -0.59
VPS13D-210ENST00000489961 COL25A1Q9BXS0 654 aaPredicted RBP11.37□□□□□ -0.59
VPS13D-210ENST00000489961 BRD9Q9H8M2 597 aa11.37□□□□□ -0.59
VPS13D-210ENST00000489961 GKN1Q9NS71 199 aa11.37□□□□□ -0.59
VPS13D-210ENST00000489961 CFAP97Q9P2B7 532 aa11.37□□□□□ -0.59
VPS13D-210ENST00000489961 LSM7Q9UK45 103 aaKnown RBP11.37□□□□□ -0.59
VPS13D-210ENST00000489961 KIF26AQ9ULI4 1882 aaPredicted RBP11.37□□□□□ -0.59
VPS13D-210ENST00000489961 SSU72P8A0A1W2PR75 194 aa11.36□□□□□ -0.59
VPS13D-210ENST00000489961 SLC12A8A0AV02 714 aa11.36□□□□□ -0.59
VPS13D-210ENST00000489961 E2F8A0AVK6 867 aa11.36□□□□□ -0.59
VPS13D-210ENST00000489961 TMCO5BA8MYB1 307 aa11.36□□□□□ -0.59
VPS13D-210ENST00000489961 GOLGA6L6A8MZA4 724 aa11.36□□□□□ -0.59
VPS13D-210ENST00000489961 TNFRSF10AO00220 468 aa11.36□□□□□ -0.59
VPS13D-210ENST00000489961 SLC9A3R1O14745 358 aaPredicted RBP11.36□□□□□ -0.59
VPS13D-210ENST00000489961 NARSO43776 548 aaKnown RBP11.36□□□□□ -0.59
VPS13D-210ENST00000489961 RTN2O75298 545 aa11.36□□□□□ -0.59
VPS13D-210ENST00000489961 DAB1O75553 588 aa11.36□□□□□ -0.59
VPS13D-210ENST00000489961 GRAP2O75791 330 aa11.36□□□□□ -0.59
VPS13D-210ENST00000489961 PLEKP08567 350 aaPredicted RBP11.36□□□□□ -0.59
VPS13D-210ENST00000489961 IRF1P10914 325 aa11.36□□□□□ -0.59
VPS13D-210ENST00000489961 IFNAR2P48551 515 aa11.36□□□□□ -0.59
VPS13D-210ENST00000489961 KPNA1P52294 538 aaPredicted RBP11.36□□□□□ -0.59
VPS13D-210ENST00000489961 GSCP56915 257 aaPredicted RBP11.36□□□□□ -0.59
VPS13D-210ENST00000489961 RNASE9P60153 205 aaKnown RBP11.36□□□□□ -0.59
VPS13D-210ENST00000489961 GPC5P78333 572 aa11.36□□□□□ -0.59
VPS13D-210ENST00000489961 ZXDAP98168 799 aa11.36□□□□□ -0.59
VPS13D-210ENST00000489961 ZXDBP98169 803 aa11.36□□□□□ -0.59
VPS13D-210ENST00000489961 PTP4A2Q12974 167 aa11.36□□□□□ -0.59
VPS13D-210ENST00000489961 PDGFRLQ15198 375 aa11.36□□□□□ -0.59
VPS13D-210ENST00000489961 C2CD6Q53TS8 623 aa11.36□□□□□ -0.59
VPS13D-210ENST00000489961 DCAF6Q58WW2 860 aa11.36□□□□□ -0.59
VPS13D-210ENST00000489961 WDR59Q6PJI9 974 aa11.36□□□□□ -0.59
VPS13D-210ENST00000489961 MON1BQ7L1V2 547 aa11.36□□□□□ -0.59
VPS13D-210ENST00000489961 DEFB106AQ8N104 65 aa11.36□□□□□ -0.59
VPS13D-210ENST00000489961 OLIG1Q8TAK6 271 aa11.36□□□□□ -0.59
VPS13D-210ENST00000489961 CSGALNACT1Q8TDX6 532 aa11.36□□□□□ -0.59
VPS13D-210ENST00000489961 DNASE1L2Q92874 299 aa11.36□□□□□ -0.59
VPS13D-210ENST00000489961 TRIM11Q96F44 468 aa11.36□□□□□ -0.59
VPS13D-210ENST00000489961 PIWIL1Q96J94 861 aaKnown RBP11.36□□□□□ -0.59
VPS13D-210ENST00000489961 VCPIP1Q96JH7 1222 aa11.36□□□□□ -0.59
VPS13D-210ENST00000489961 ZFRQ96KR1 1074 aaKnown RBP11.36□□□□□ -0.59
VPS13D-210ENST00000489961 SERPINB11Q96P15 392 aa11.36□□□□□ -0.59
VPS13D-210ENST00000489961 LRRC3BQ96PB8 259 aa11.36□□□□□ -0.59
VPS13D-210ENST00000489961 SLC2A13Q96QE2 648 aa11.36□□□□□ -0.59
VPS13D-210ENST00000489961 SMOC2Q9H3U7 446 aa11.36□□□□□ -0.59
VPS13D-210ENST00000489961 DEF6Q9H4E7 631 aa11.36□□□□□ -0.59
VPS13D-210ENST00000489961 GRPEL1Q9HAV7 217 aa11.36□□□□□ -0.59
VPS13D-210ENST00000489961 SLC2A4RGQ9NR83 387 aa11.36□□□□□ -0.59
VPS13D-210ENST00000489961 DUS2Q9NX74 493 aaKnown RBP11.36□□□□□ -0.59
VPS13D-210ENST00000489961 RRN3Q9NYV6 651 aa11.36□□□□□ -0.59
VPS13D-210ENST00000489961 ARHGAP20Q9P2F6 1191 aa11.36□□□□□ -0.59
VPS13D-210ENST00000489961 TBC1D14Q9P2M4 693 aa11.36□□□□□ -0.59
VPS13D-210ENST00000489961 ADAMTS1Q9UHI8 967 aa11.36□□□□□ -0.59
VPS13D-210ENST00000489961 SFMBT1Q9UHJ3 866 aa11.36□□□□□ -0.59
VPS13D-210ENST00000489961 NAALADL1Q9UQQ1 740 aa11.36□□□□□ -0.59
VPS13D-210ENST00000489961 HBS1LQ9Y450 684 aaKnown RBP11.36□□□□□ -0.59
VPS13D-210ENST00000489961 TICRRQ7Z2Z1 1910 aa11.35□□□□□ -0.59
VPS13D-210ENST00000489961 STC2O76061 302 aa11.35□□□□□ -0.59
VPS13D-210ENST00000489961 FTLP02792 175 aaPredicted RBP11.35□□□□□ -0.59
VPS13D-210ENST00000489961 FYNP06241 537 aa11.35□□□□□ -0.59
VPS13D-210ENST00000489961 HMBSP08397 361 aa11.35□□□□□ -0.59
VPS13D-210ENST00000489961 GBP1P32455 592 aa11.35□□□□□ -0.59
VPS13D-210ENST00000489961 NOS2P35228 1153 aa11.35□□□□□ -0.59
VPS13D-210ENST00000489961 EIF4A3P38919 411 aaKnown RBP11.35□□□□□ -0.59
VPS13D-210ENST00000489961 MATKP42679 507 aa11.35□□□□□ -0.59
VPS13D-210ENST00000489961 CDK17Q00537 523 aa11.35□□□□□ -0.59
VPS13D-210ENST00000489961 MAPK8IP2Q13387 824 aaPredicted RBP11.35□□□□□ -0.59
VPS13D-210ENST00000489961 NNTQ13423 1086 aa11.35□□□□□ -0.59
VPS13D-210ENST00000489961 TAF5Q15542 800 aa11.35□□□□□ -0.59
VPS13D-210ENST00000489961 TRIP4Q15650 581 aaPredicted RBP11.35□□□□□ -0.59
VPS13D-210ENST00000489961 SYPL2Q5VXT5 272 aa11.35□□□□□ -0.59
VPS13D-210ENST00000489961 MCOLN2Q8IZK6 566 aa11.35□□□□□ -0.59
VPS13D-210ENST00000489961 TC2NQ8N9U0 490 aa11.35□□□□□ -0.59
VPS13D-210ENST00000489961 RIN3Q8TB24 985 aa11.35□□□□□ -0.59
VPS13D-210ENST00000489961 DQX1Q8TE96 717 aaKnown RBP11.35□□□□□ -0.59
VPS13D-210ENST00000489961 OSCP1Q8WVF1 389 aa11.35□□□□□ -0.59
VPS13D-210ENST00000489961 EDAQ92838 391 aa11.35□□□□□ -0.59
VPS13D-210ENST00000489961 PLD4Q96BZ4 506 aa11.35□□□□□ -0.59
VPS13D-210ENST00000489961 OTUB2Q96DC9 234 aa11.35□□□□□ -0.59
VPS13D-210ENST00000489961 ZFYVE19Q96K21 471 aa11.35□□□□□ -0.59
VPS13D-210ENST00000489961 SELENOOQ9BVL4 669 aa11.35□□□□□ -0.59
VPS13D-210ENST00000489961 DCLK3Q9C098 648 aa11.35□□□□□ -0.59
VPS13D-210ENST00000489961 TRPV5Q9NQA5 729 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms