RNA–Protein interactions for RNA: ENST00000489241.1

XRN1-213, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-213ENST00000489241 TMOD4Q9NZQ9 345 aa4.94□□□□□ -1.62
XRN1-213ENST00000489241 NDRG4Q9ULP0 352 aaKnown RBP4.94□□□□□ -1.62
XRN1-213ENST00000489241 SCINQ9Y6U3 715 aa4.94□□□□□ -1.62
XRN1-213ENST00000489241 HOXC11O43248 304 aaPredicted RBP4.93□□□□□ -1.62
XRN1-213ENST00000489241 DHHO43323 396 aa4.93□□□□□ -1.62
XRN1-213ENST00000489241 RGS10O43665 173 aa4.93□□□□□ -1.62
XRN1-213ENST00000489241 SRGAP2O75044 1071 aa4.93□□□□□ -1.62
XRN1-213ENST00000489241 MBD4O95243 580 aa4.93□□□□□ -1.62
XRN1-213ENST00000489241 CD4P01730 458 aa4.93□□□□□ -1.62
XRN1-213ENST00000489241 SRGAP2BP0DMP2 458 aa4.93□□□□□ -1.62
XRN1-213ENST00000489241 KLRK1P26718 216 aa4.93□□□□□ -1.62
XRN1-213ENST00000489241 FOLR3P41439 243 aa4.93□□□□□ -1.62
XRN1-213ENST00000489241 TUBP50607 506 aa4.93□□□□□ -1.62
XRN1-213ENST00000489241 PRKAG1P54619 331 aa4.93□□□□□ -1.62
XRN1-213ENST00000489241 ALDH18A1P54886 795 aaKnown RBP4.93□□□□□ -1.62
XRN1-213ENST00000489241 C21orf58P58505 322 aa4.93□□□□□ -1.62
XRN1-213ENST00000489241 FOXI1Q12951 378 aa4.93□□□□□ -1.62
XRN1-213ENST00000489241 PTPRRQ15256 657 aa4.93□□□□□ -1.62
XRN1-213ENST00000489241 ANKRD45Q5TZF3 282 aa4.93□□□□□ -1.62
XRN1-213ENST00000489241 ABLIM2Q6H8Q1 611 aa4.93□□□□□ -1.62
XRN1-213ENST00000489241 VWA1Q6PCB0 445 aa4.93□□□□□ -1.62
XRN1-213ENST00000489241 C1orf122Q6ZSJ8 110 aa4.93□□□□□ -1.62
XRN1-213ENST00000489241 RD3Q7Z3Z2 195 aa4.93□□□□□ -1.62
XRN1-213ENST00000489241 RASGRP3Q8IV61 690 aa4.93□□□□□ -1.62
XRN1-213ENST00000489241 SLC15A3Q8IY34 581 aa4.93□□□□□ -1.62
XRN1-213ENST00000489241 FAM109AQ8N4B1 249 aa4.93□□□□□ -1.62
XRN1-213ENST00000489241 TOR1AIP2Q8NFQ8 470 aa4.93□□□□□ -1.62
XRN1-213ENST00000489241 DNAJB14Q8TBM8 379 aa4.93□□□□□ -1.62
XRN1-213ENST00000489241 AFG1LQ8WV93 481 aa4.93□□□□□ -1.62
XRN1-213ENST00000489241 SLC9A6Q92581 669 aa4.93□□□□□ -1.62
XRN1-213ENST00000489241 RSC1A1Q92681 617 aa4.93□□□□□ -1.62
XRN1-213ENST00000489241 SLC26A6Q9BXS9 759 aa4.93□□□□□ -1.62
XRN1-213ENST00000489241 ACTRT3Q9BYD9 372 aa4.93□□□□□ -1.62
XRN1-213ENST00000489241 TRIM5Q9C035 493 aa4.93□□□□□ -1.62
XRN1-213ENST00000489241 TMX4Q9H1E5 349 aaPredicted RBP4.93□□□□□ -1.62
XRN1-213ENST00000489241 UNC45AQ9H3U1 944 aa4.93□□□□□ -1.62
XRN1-213ENST00000489241 PRDM13Q9H4Q3 707 aa4.93□□□□□ -1.62
XRN1-213ENST00000489241 TAF1DQ9H5J8 278 aaPredicted RBP4.93□□□□□ -1.62
XRN1-213ENST00000489241 UBN1Q9NPG3 1134 aa4.93□□□□□ -1.62
XRN1-213ENST00000489241 VPS51Q9UID3 782 aa4.93□□□□□ -1.62
XRN1-213ENST00000489241 DAPP1Q9UN19 280 aa4.93□□□□□ -1.62
XRN1-213ENST00000489241 TMEM98Q9Y2Y6 226 aa4.93□□□□□ -1.62
XRN1-213ENST00000489241 INSL6Q9Y581 213 aa4.93□□□□□ -1.62
XRN1-213ENST00000489241 COX11Q9Y6N1 276 aa4.93□□□□□ -1.62
XRN1-213ENST00000489241 H0Y3Z8 333 aa4.92□□□□□ -1.62
XRN1-213ENST00000489241 J3KTA2 159 aa4.92□□□□□ -1.62
XRN1-213ENST00000489241 YY2O15391 372 aa4.92□□□□□ -1.62
XRN1-213ENST00000489241 CD3EAPO15446 510 aaKnown RBP4.92□□□□□ -1.62
XRN1-213ENST00000489241 PROM1O43490 865 aa4.92□□□□□ -1.62
XRN1-213ENST00000489241 ORC4O43929 436 aa4.92□□□□□ -1.62
XRN1-213ENST00000489241 CCNT2O60583 730 aaKnown RBP4.92□□□□□ -1.62
XRN1-213ENST00000489241 VIPP01282 170 aa4.92□□□□□ -1.62
XRN1-213ENST00000489241 PRKCBP05771 671 aa4.92□□□□□ -1.62
XRN1-213ENST00000489241 CD38P28907 300 aa4.92□□□□□ -1.62
XRN1-213ENST00000489241 RXRGP48443 463 aa4.92□□□□□ -1.62
XRN1-213ENST00000489241 PAPOLAP51003 745 aaKnown RBP4.92□□□□□ -1.62
XRN1-213ENST00000489241 TLE2Q04725 743 aa4.92□□□□□ -1.62
XRN1-213ENST00000489241 GPS1Q13098 491 aa4.92□□□□□ -1.62
XRN1-213ENST00000489241 MPP3Q13368 585 aa4.92□□□□□ -1.62
XRN1-213ENST00000489241 FHL3Q13643 280 aa4.92□□□□□ -1.62
XRN1-213ENST00000489241 GRM4Q14833 912 aa4.92□□□□□ -1.62
XRN1-213ENST00000489241 TEDDM1Q5T9Z0 273 aa4.92□□□□□ -1.62
XRN1-213ENST00000489241 ATPAF1Q5TC12 328 aaPredicted RBP4.92□□□□□ -1.62
XRN1-213ENST00000489241 RGS7BPQ6MZT1 257 aaPredicted RBP4.92□□□□□ -1.62
XRN1-213ENST00000489241 FAM180BQ6P0A1 224 aa4.92□□□□□ -1.62
XRN1-213ENST00000489241 Q6ZNX1 250 aa4.92□□□□□ -1.62
XRN1-213ENST00000489241 RRAGAQ7L523 313 aa4.92□□□□□ -1.62
XRN1-213ENST00000489241 HEATR4Q86WZ0 1026 aa4.92□□□□□ -1.62
XRN1-213ENST00000489241 NRSN1Q8IZ57 195 aa4.92□□□□□ -1.62
XRN1-213ENST00000489241 SPARTQ8N0X7 666 aa4.92□□□□□ -1.62
XRN1-213ENST00000489241 OR6Y1Q8NGX8 325 aa4.92□□□□□ -1.62
XRN1-213ENST00000489241 CSGALNACT1Q8TDX6 532 aa4.92□□□□□ -1.62
XRN1-213ENST00000489241 LPIN2Q92539 896 aa4.92□□□□□ -1.62
XRN1-213ENST00000489241 SDCCAG3Q96C92 435 aa4.92□□□□□ -1.62
XRN1-213ENST00000489241 GRAMD1AQ96CP6 724 aa4.92□□□□□ -1.62
XRN1-213ENST00000489241 ZDHHC12Q96GR4 267 aa4.92□□□□□ -1.62
XRN1-213ENST00000489241 FBXL20Q96IG2 436 aa4.92□□□□□ -1.62
XRN1-213ENST00000489241 TRAPPC9Q96Q05 1148 aa4.92□□□□□ -1.62
XRN1-213ENST00000489241 AIFM2Q9BRQ8 373 aa4.92□□□□□ -1.62
XRN1-213ENST00000489241 TWSG1Q9GZX9 223 aa4.92□□□□□ -1.62
XRN1-213ENST00000489241 R3HDMLQ9H3Y0 253 aa4.92□□□□□ -1.62
XRN1-213ENST00000489241 GBA2Q9HCG7 927 aaPredicted RBP4.92□□□□□ -1.62
XRN1-213ENST00000489241 SEPSECSQ9HD40 501 aaKnown RBP4.92□□□□□ -1.62
XRN1-213ENST00000489241 FSCN3Q9NQT6 498 aa4.92□□□□□ -1.62
XRN1-213ENST00000489241 DNAJB11Q9UBS4 358 aa4.92□□□□□ -1.62
XRN1-213ENST00000489241 SLC13A4Q9UKG4 626 aa4.92□□□□□ -1.62
XRN1-213ENST00000489241 MAST3O60307 1309 aa4.92□□□□□ -1.62
XRN1-213ENST00000489241 FAM90A18PA6NE21 464 aa4.91□□□□□ -1.62
XRN1-213ENST00000489241 FAM90A16PA6NEW6 464 aa4.91□□□□□ -1.62
XRN1-213ENST00000489241 A6NLC8 198 aa4.91□□□□□ -1.62
XRN1-213ENST00000489241 FAM90A9PA6NNJ1 464 aa4.91□□□□□ -1.62
XRN1-213ENST00000489241 FAM90A5PA8MXJ8 464 aa4.91□□□□□ -1.62
XRN1-213ENST00000489241 ADM5C9JUS6 153 aa4.91□□□□□ -1.62
XRN1-213ENST00000489241 SNX2O60749 519 aa4.91□□□□□ -1.62
XRN1-213ENST00000489241 ESRRBO95718 433 aa4.91□□□□□ -1.62
XRN1-213ENST00000489241 TK1P04183 234 aa4.91□□□□□ -1.62
XRN1-213ENST00000489241 CSF1RP07333 972 aa4.91□□□□□ -1.62
XRN1-213ENST00000489241 LDHCP07864 332 aa4.91□□□□□ -1.62
XRN1-213ENST00000489241 FAM90A15PP0C7V4 464 aa4.91□□□□□ -1.62
XRN1-213ENST00000489241 FAM90A14PP0C7W9 464 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms