RNA–Protein interactions for RNA: ENST00000489049.5

PDCD4-209, Transcript of programmed cell death 4, humanhuman

TSL 2

Gene PDCD4, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-209ENST00000489049 TMEM191CA6NGB0 347 aa6.98□□□□□ -1.29
PDCD4-209ENST00000489049 SIGLEC16A6NMB1 481 aa6.98□□□□□ -1.29
PDCD4-209ENST00000489049 LACTBL1A8MY62 500 aa6.98□□□□□ -1.29
PDCD4-209ENST00000489049 HMGB1P1B2RPK0 211 aaPredicted RBP6.98□□□□□ -1.29
PDCD4-209ENST00000489049 HAS3O00219 553 aa6.98□□□□□ -1.29
PDCD4-209ENST00000489049 TSPAN1O60635 241 aa6.98□□□□□ -1.29
PDCD4-209ENST00000489049 PEX10O60683 326 aa6.98□□□□□ -1.29
PDCD4-209ENST00000489049 TJP3O95049 919 aa6.98□□□□□ -1.29
PDCD4-209ENST00000489049 CST3P01034 146 aaPredicted RBP6.98□□□□□ -1.29
PDCD4-209ENST00000489049 CEACAM5P06731 702 aa6.98□□□□□ -1.29
PDCD4-209ENST00000489049 KRT7P08729 469 aa6.98□□□□□ -1.29
PDCD4-209ENST00000489049 HARSP12081 509 aaKnown RBP6.98□□□□□ -1.29
PDCD4-209ENST00000489049 DARSP14868 501 aaKnown RBP6.98□□□□□ -1.29
PDCD4-209ENST00000489049 KCNE1P15382 129 aa6.98□□□□□ -1.29
PDCD4-209ENST00000489049 ARF4P18085 180 aaPredicted RBP6.98□□□□□ -1.29
PDCD4-209ENST00000489049 ITIH2P19823 946 aa6.98□□□□□ -1.29
PDCD4-209ENST00000489049 CYP3A5P20815 502 aa6.98□□□□□ -1.29
PDCD4-209ENST00000489049 RRM1P23921 792 aa6.98□□□□□ -1.29
PDCD4-209ENST00000489049 GABRB2P47870 512 aa6.98□□□□□ -1.29
PDCD4-209ENST00000489049 CDR1P51861 262 aa6.98□□□□□ -1.29
PDCD4-209ENST00000489049 CRYBB1P53674 252 aaPredicted RBP6.98□□□□□ -1.29
PDCD4-209ENST00000489049 OXCT1P55809 520 aa6.98□□□□□ -1.29
PDCD4-209ENST00000489049 HLTFQ14527 1009 aaKnown RBP eCLIP6.98□□□□□ -1.29
PDCD4-209ENST00000489049 CCNG2Q16589 344 aa6.98□□□□□ -1.29
PDCD4-209ENST00000489049 HADHQ16836 314 aaKnown RBP6.98□□□□□ -1.29
PDCD4-209ENST00000489049 ODF2Q5BJF6 829 aa6.98□□□□□ -1.29
PDCD4-209ENST00000489049 ZBTB41Q5SVQ8 909 aa6.98□□□□□ -1.29
PDCD4-209ENST00000489049 MARCH8Q5T0T0 291 aa6.98□□□□□ -1.29
PDCD4-209ENST00000489049 ZNF648Q5T619 568 aaPredicted RBP6.98□□□□□ -1.29
PDCD4-209ENST00000489049 MFSD14CQ5VZR4 134 aa6.98□□□□□ -1.29
PDCD4-209ENST00000489049 EEF1DP3Q658K8 133 aa6.98□□□□□ -1.29
PDCD4-209ENST00000489049 RGMBQ6NW40 437 aa6.98□□□□□ -1.29
PDCD4-209ENST00000489049 DNAJC24Q6P3W2 148 aa6.98□□□□□ -1.29
PDCD4-209ENST00000489049 ARCQ7LC44 396 aa6.98□□□□□ -1.29
PDCD4-209ENST00000489049 RPAINQ86UA6 219 aa6.98□□□□□ -1.29
PDCD4-209ENST00000489049 RSPH3Q86UC2 560 aa6.98□□□□□ -1.29
PDCD4-209ENST00000489049 VSIG1Q86XK7 387 aa6.98□□□□□ -1.29
PDCD4-209ENST00000489049 ZDHHC17Q8IUH5 632 aa6.98□□□□□ -1.29
PDCD4-209ENST00000489049 KLHL7Q8IXQ5 586 aa6.98□□□□□ -1.29
PDCD4-209ENST00000489049 ARFGAP2Q8N6H7 521 aa6.98□□□□□ -1.29
PDCD4-209ENST00000489049 BEST2Q8NFU1 509 aa6.98□□□□□ -1.29
PDCD4-209ENST00000489049 ATL2Q8NHH9 583 aa6.98□□□□□ -1.29
PDCD4-209ENST00000489049 HDAC7Q8WUI4 952 aa6.98□□□□□ -1.29
PDCD4-209ENST00000489049 CASKIN2Q8WXE0 1202 aa6.98□□□□□ -1.29
PDCD4-209ENST00000489049 IFT81Q8WYA0 676 aa6.98□□□□□ -1.29
PDCD4-209ENST00000489049 ALG3Q92685 438 aa6.98□□□□□ -1.29
PDCD4-209ENST00000489049 ISL2Q96A47 359 aa6.98□□□□□ -1.29
PDCD4-209ENST00000489049 CYFIP2Q96F07 1278 aa6.98□□□□□ -1.29
PDCD4-209ENST00000489049 HPDLQ96IR7 371 aa6.98□□□□□ -1.29
PDCD4-209ENST00000489049 PTPN18Q99952 460 aa6.98□□□□□ -1.29
PDCD4-209ENST00000489049 KRTAP4-7Q9BYR0 210 aa6.98□□□□□ -1.29
PDCD4-209ENST00000489049 MTMR12Q9C0I1 747 aa6.98□□□□□ -1.29
PDCD4-209ENST00000489049 STMN4Q9H169 189 aaPredicted RBP6.98□□□□□ -1.29
PDCD4-209ENST00000489049 SPC25Q9HBM1 224 aa6.98□□□□□ -1.29
PDCD4-209ENST00000489049 TMEM51Q9NW97 253 aa6.98□□□□□ -1.29
PDCD4-209ENST00000489049 DPP3Q9NY33 737 aa6.98□□□□□ -1.29
PDCD4-209ENST00000489049 WHRNQ9P202 907 aa6.98□□□□□ -1.29
PDCD4-209ENST00000489049 ZHX1Q9UKY1 873 aaPredicted RBP6.98□□□□□ -1.29
PDCD4-209ENST00000489049 NFU1Q9UMS0 254 aa6.98□□□□□ -1.29
PDCD4-209ENST00000489049 PACSIN2Q9UNF0 486 aaPredicted RBP6.98□□□□□ -1.29
PDCD4-209ENST00000489049 PLXNB2O15031 1838 aa6.98□□□□□ -1.29
PDCD4-209ENST00000489049 TMEM110-MUSTN1A8MSY1 372 aa6.97□□□□□ -1.29
PDCD4-209ENST00000489049 TLR3O15455 904 aaKnown RBP6.97□□□□□ -1.29
PDCD4-209ENST00000489049 DUSP11O75319 330 aaKnown RBP6.97□□□□□ -1.29
PDCD4-209ENST00000489049 PPFIA2O75334 1257 aa6.97□□□□□ -1.29
PDCD4-209ENST00000489049 CILPO75339 1184 aa6.97□□□□□ -1.29
PDCD4-209ENST00000489049 RPS6KA5O75582 802 aa6.97□□□□□ -1.29
PDCD4-209ENST00000489049 TOMM70O94826 608 aa6.97□□□□□ -1.29
PDCD4-209ENST00000489049 ERBB2P04626 1255 aa6.97□□□□□ -1.29
PDCD4-209ENST00000489049 EDN1P05305 212 aa6.97□□□□□ -1.29
PDCD4-209ENST00000489049 ZNF865P0CJ78 1059 aaPredicted RBP6.97□□□□□ -1.29
PDCD4-209ENST00000489049 SMIM10L2AP0DMW4 78 aa6.97□□□□□ -1.29
PDCD4-209ENST00000489049 SMIM10L2BP0DMW5 78 aa6.97□□□□□ -1.29
PDCD4-209ENST00000489049 CXCL8P10145 99 aa6.97□□□□□ -1.29
PDCD4-209ENST00000489049 PYGMP11217 842 aa6.97□□□□□ -1.29
PDCD4-209ENST00000489049 AKR1A1P14550 325 aa6.97□□□□□ -1.29
PDCD4-209ENST00000489049 TCF3P15923 654 aa6.97□□□□□ -1.29
PDCD4-209ENST00000489049 HOXC8P31273 242 aa6.97□□□□□ -1.29
PDCD4-209ENST00000489049 COILP38432 576 aaPredicted RBP6.97□□□□□ -1.29
PDCD4-209ENST00000489049 TNFSF9P41273 254 aa6.97□□□□□ -1.29
PDCD4-209ENST00000489049 TM4SF4P48230 202 aa6.97□□□□□ -1.29
PDCD4-209ENST00000489049 CARSP49589 748 aaKnown RBP6.97□□□□□ -1.29
PDCD4-209ENST00000489049 DNA2P51530 1060 aa6.97□□□□□ -1.29
PDCD4-209ENST00000489049 IGBP1P78318 339 aa6.97□□□□□ -1.29
PDCD4-209ENST00000489049 ADAM17P78536 824 aa6.97□□□□□ -1.29
PDCD4-209ENST00000489049 SLC7A5Q01650 507 aa6.97□□□□□ -1.29
PDCD4-209ENST00000489049 PTPN11Q06124 597 aaPredicted RBP6.97□□□□□ -1.29
PDCD4-209ENST00000489049 DMTNQ08495 405 aa6.97□□□□□ -1.29
PDCD4-209ENST00000489049 CALCOCO2Q13137 446 aa6.97□□□□□ -1.29
PDCD4-209ENST00000489049 ZBTB6Q15916 424 aa6.97□□□□□ -1.29
PDCD4-209ENST00000489049 SLC10A6Q3KNW5 377 aa6.97□□□□□ -1.29
PDCD4-209ENST00000489049 WDR72Q3MJ13 1102 aa6.97□□□□□ -1.29
PDCD4-209ENST00000489049 XKR4Q5GH76 650 aa6.97□□□□□ -1.29
PDCD4-209ENST00000489049 DCAF12L1Q5VU92 463 aa6.97□□□□□ -1.29
PDCD4-209ENST00000489049 CST9Q5W186 159 aa6.97□□□□□ -1.29
PDCD4-209ENST00000489049 LMBRD2Q68DH5 695 aaPredicted RBP6.97□□□□□ -1.29
PDCD4-209ENST00000489049 JADE1Q6IE81 842 aa6.97□□□□□ -1.29
PDCD4-209ENST00000489049 SPOPLQ6IQ16 392 aa6.97□□□□□ -1.29
PDCD4-209ENST00000489049 DCUN1D2Q6PH85 259 aa6.97□□□□□ -1.29
PDCD4-209ENST00000489049 LCLAT1Q6UWP7 414 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms