RNA–Protein interactions for RNA: ENST00000488921.5

SPTLC1-207, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 3

Gene SPTLC1, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-207ENST00000488921 O00370 1275 aa14.49□□□□□ -0.09
SPTLC1-207ENST00000488921 MDM4O15151 490 aa14.49□□□□□ -0.09
SPTLC1-207ENST00000488921 GREM1O60565 184 aa14.49□□□□□ -0.09
SPTLC1-207ENST00000488921 TULP3O75386 442 aa14.49□□□□□ -0.09
SPTLC1-207ENST00000488921 ALDH1A2O94788 518 aa14.49□□□□□ -0.09
SPTLC1-207ENST00000488921 ZBED1O96006 694 aa14.49□□□□□ -0.09
SPTLC1-207ENST00000488921 DGKEP52429 567 aa14.49□□□□□ -0.09
SPTLC1-207ENST00000488921 YWHAGP61981 247 aaKnown RBP eCLIP14.49□□□□□ -0.09
SPTLC1-207ENST00000488921 FOXK2Q01167 660 aa14.49□□□□□ -0.09
SPTLC1-207ENST00000488921 PUM1Q14671 1186 aaKnown RBP eCLIP14.49□□□□□ -0.09
SPTLC1-207ENST00000488921 CAMK4Q16566 473 aa14.49□□□□□ -0.09
SPTLC1-207ENST00000488921 EOGTQ5NDL2 527 aa14.49□□□□□ -0.09
SPTLC1-207ENST00000488921 PM20D1Q6GTS8 502 aa14.49□□□□□ -0.09
SPTLC1-207ENST00000488921 C11orf74Q86VG3 221 aa14.49□□□□□ -0.09
SPTLC1-207ENST00000488921 TMEM25Q86YD3 366 aa14.49□□□□□ -0.09
SPTLC1-207ENST00000488921 MIB1Q86YT6 1006 aa14.49□□□□□ -0.09
SPTLC1-207ENST00000488921 SIX6OS1Q8N1H7 587 aa14.49□□□□□ -0.09
SPTLC1-207ENST00000488921 PHTF2Q8N3S3 785 aa14.49□□□□□ -0.09
SPTLC1-207ENST00000488921 NAT16Q8N8M0 369 aa14.49□□□□□ -0.09
SPTLC1-207ENST00000488921 TERB1Q8NA31 727 aa14.49□□□□□ -0.09
SPTLC1-207ENST00000488921 KCNV2Q8TDN2 545 aa14.49□□□□□ -0.09
SPTLC1-207ENST00000488921 WBP2Q969T9 261 aa14.49□□□□□ -0.09
SPTLC1-207ENST00000488921 BBS2Q9BXC9 721 aa14.49□□□□□ -0.09
SPTLC1-207ENST00000488921 RWDD2AQ9UIY3 292 aa14.49□□□□□ -0.09
SPTLC1-207ENST00000488921 NUDT5Q9UKK9 219 aa14.49□□□□□ -0.09
SPTLC1-207ENST00000488921 SPTBN4Q9H254 2564 aa14.48□□□□□ -0.09
SPTLC1-207ENST00000488921 TBC1D3BA6NDS4 549 aa14.48□□□□□ -0.09
SPTLC1-207ENST00000488921 NEDD8-MDP1E9PL57 170 aa14.48□□□□□ -0.09
SPTLC1-207ENST00000488921 CACNG3O60359 315 aa14.48□□□□□ -0.09
SPTLC1-207ENST00000488921 STC2O76061 302 aa14.48□□□□□ -0.09
SPTLC1-207ENST00000488921 TYRP14679 529 aa14.48□□□□□ -0.09
SPTLC1-207ENST00000488921 TIE1P35590 1138 aa14.48□□□□□ -0.09
SPTLC1-207ENST00000488921 CHKAP35790 457 aa14.48□□□□□ -0.09
SPTLC1-207ENST00000488921 SPEM2Q0P670 501 aa14.48□□□□□ -0.09
SPTLC1-207ENST00000488921 ADIGQ0VDE8 80 aa14.48□□□□□ -0.09
SPTLC1-207ENST00000488921 EFEMP1Q12805 493 aa14.48□□□□□ -0.09
SPTLC1-207ENST00000488921 ELF2Q15723 593 aa14.48□□□□□ -0.09
SPTLC1-207ENST00000488921 CRY1Q16526 586 aa14.48□□□□□ -0.09
SPTLC1-207ENST00000488921 GRAMD4Q6IC98 578 aa14.48□□□□□ -0.09
SPTLC1-207ENST00000488921 LCLAT1Q6UWP7 414 aa14.48□□□□□ -0.09
SPTLC1-207ENST00000488921 Q6ZNB5 142 aa14.48□□□□□ -0.09
SPTLC1-207ENST00000488921 ALLCQ8N6M5 410 aa14.48□□□□□ -0.09
SPTLC1-207ENST00000488921 EHBP1Q8NDI1 1231 aa14.48□□□□□ -0.09
SPTLC1-207ENST00000488921 LMO3Q8TAP4 145 aa14.48□□□□□ -0.09
SPTLC1-207ENST00000488921 KCTD13Q8WZ19 329 aa14.48□□□□□ -0.09
SPTLC1-207ENST00000488921 RMDN1Q96DB5 314 aa14.48□□□□□ -0.09
SPTLC1-207ENST00000488921 CNOT6LQ96LI5 555 aaKnown RBP14.48□□□□□ -0.09
SPTLC1-207ENST00000488921 FAM81BQ96LP2 452 aa14.48□□□□□ -0.09
SPTLC1-207ENST00000488921 ULBP1Q9BZM6 244 aa14.48□□□□□ -0.09
SPTLC1-207ENST00000488921 POLMQ9NP87 494 aaPredicted RBP14.48□□□□□ -0.09
SPTLC1-207ENST00000488921 CNGB3Q9NQW8 809 aa14.48□□□□□ -0.09
SPTLC1-207ENST00000488921 DNAJC17Q9NVM6 304 aaKnown RBP14.48□□□□□ -0.09
SPTLC1-207ENST00000488921 MARCH2Q9P0N8 246 aa14.48□□□□□ -0.09
SPTLC1-207ENST00000488921 GPR179Q6PRD1 2367 aa14.47□□□□□ -0.09
SPTLC1-207ENST00000488921 MYO18AQ92614 2054 aaKnown RBP14.47□□□□□ -0.09
SPTLC1-207ENST00000488921 EPN2O95208 641 aa14.47□□□□□ -0.09
SPTLC1-207ENST00000488921 KLF8O95600 359 aaPredicted RBP14.47□□□□□ -0.09
SPTLC1-207ENST00000488921 HOXC13P31276 330 aa14.47□□□□□ -0.09
SPTLC1-207ENST00000488921 KIR2DL1P43626 348 aaPredicted RBP14.47□□□□□ -0.09
SPTLC1-207ENST00000488921 CNGA2Q16280 664 aa14.47□□□□□ -0.09
SPTLC1-207ENST00000488921 CSRP2Q16527 193 aa14.47□□□□□ -0.09
SPTLC1-207ENST00000488921 USP39Q53GS9 565 aaKnown RBP14.47□□□□□ -0.09
SPTLC1-207ENST00000488921 C10orf76Q5T2E6 689 aa14.47□□□□□ -0.09
SPTLC1-207ENST00000488921 TPGS1Q6ZTW0 290 aa14.47□□□□□ -0.09
SPTLC1-207ENST00000488921 ENOSF1Q7L5Y1 443 aa14.47□□□□□ -0.09
SPTLC1-207ENST00000488921 KBTBD6Q86V97 674 aa14.47□□□□□ -0.09
SPTLC1-207ENST00000488921 RASSF3Q86WH2 238 aa14.47□□□□□ -0.09
SPTLC1-207ENST00000488921 SCML4Q8N228 414 aa14.47□□□□□ -0.09
SPTLC1-207ENST00000488921 CCDC33Q8N5R6 958 aa14.47□□□□□ -0.09
SPTLC1-207ENST00000488921 ZNF513Q8N8E2 541 aaPredicted RBP14.47□□□□□ -0.09
SPTLC1-207ENST00000488921 IL17RCQ8NAC3 791 aa14.47□□□□□ -0.09
SPTLC1-207ENST00000488921 MLKLQ8NB16 471 aa14.47□□□□□ -0.09
SPTLC1-207ENST00000488921 TXNDC5Q8NBS9 432 aaKnown RBP14.47□□□□□ -0.09
SPTLC1-207ENST00000488921 RBBP8NLQ8NC74 664 aaPredicted RBP14.47□□□□□ -0.09
SPTLC1-207ENST00000488921 RNF139Q8WU17 664 aa14.47□□□□□ -0.09
SPTLC1-207ENST00000488921 PLD4Q96BZ4 506 aa14.47□□□□□ -0.09
SPTLC1-207ENST00000488921 ZC3H10Q96K80 434 aaKnown RBP14.47□□□□□ -0.09
SPTLC1-207ENST00000488921 INTS2Q9H0H0 1204 aaKnown RBP14.47□□□□□ -0.09
SPTLC1-207ENST00000488921 PARD6AQ9NPB6 346 aa14.47□□□□□ -0.09
SPTLC1-207ENST00000488921 ABCC13Q9NSE7 274 aa14.47□□□□□ -0.09
SPTLC1-207ENST00000488921 SEMA4GQ9NTN9 838 aa14.47□□□□□ -0.09
SPTLC1-207ENST00000488921 POLR3BQ9NW08 1133 aaPredicted RBP14.47□□□□□ -0.09
SPTLC1-207ENST00000488921 CDV3Q9UKY7 258 aaKnown RBP14.47□□□□□ -0.09
SPTLC1-207ENST00000488921 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.47□□□□□ -0.09
SPTLC1-207ENST00000488921 PCDHGA5Q9Y5G8 931 aa14.47□□□□□ -0.09
SPTLC1-207ENST00000488921 NUP205Q92621 2012 aa14.46□□□□□ -0.09
SPTLC1-207ENST00000488921 DNAH14Q0VDD8 3507 aa14.46□□□□□ -0.09
SPTLC1-207ENST00000488921 THADAQ6YHU6 1953 aa14.46□□□□□ -0.09
SPTLC1-207ENST00000488921 M0QYV0 167 aa14.46□□□□□ -0.09
SPTLC1-207ENST00000488921 TULP2O00295 520 aa14.46□□□□□ -0.09
SPTLC1-207ENST00000488921 RHOBTB1O94844 696 aa14.46□□□□□ -0.09
SPTLC1-207ENST00000488921 TGM1P22735 817 aa14.46□□□□□ -0.09
SPTLC1-207ENST00000488921 CORO1AP31146 461 aaKnown RBP14.46□□□□□ -0.09
SPTLC1-207ENST00000488921 MESP2Q0VG99 397 aa14.46□□□□□ -0.09
SPTLC1-207ENST00000488921 TPD52L1Q16890 204 aaPredicted RBP14.46□□□□□ -0.09
SPTLC1-207ENST00000488921 RSPO4Q2I0M5 234 aaPredicted RBP14.46□□□□□ -0.09
SPTLC1-207ENST00000488921 PKDCCQ504Y2 493 aa14.46□□□□□ -0.09
SPTLC1-207ENST00000488921 ANO7Q6IWH7 933 aa14.46□□□□□ -0.09
SPTLC1-207ENST00000488921 PRR23CQ6ZRP0 262 aa14.46□□□□□ -0.09
SPTLC1-207ENST00000488921 RRAGAQ7L523 313 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms