RNA–Protein interactions for RNA: ENST00000488908.1

CCDC93-209, Transcript of coiled-coil domain containing 93, humanhuman

TSL 5

Gene CCDC93, Length 268 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-209ENST00000488908 RPS6KB1P23443 525 aa3.35□□□□□ -1.87
CCDC93-209ENST00000488908 ADRA1DP25100 572 aa3.35□□□□□ -1.87
CCDC93-209ENST00000488908 JAK3P52333 1124 aa3.35□□□□□ -1.87
CCDC93-209ENST00000488908 ARFIP2P53365 341 aa3.35□□□□□ -1.87
CCDC93-209ENST00000488908 RAB1AP62820 205 aa3.35□□□□□ -1.87
CCDC93-209ENST00000488908 TXNL4AP83876 142 aaKnown RBP3.35□□□□□ -1.87
CCDC93-209ENST00000488908 EGR4Q05215 589 aa3.35□□□□□ -1.87
CCDC93-209ENST00000488908 DEUP1Q05D60 604 aa3.35□□□□□ -1.87
CCDC93-209ENST00000488908 SLC13A2Q13183 592 aa3.35□□□□□ -1.87
CCDC93-209ENST00000488908 ST3GAL2Q16842 350 aa3.35□□□□□ -1.87
CCDC93-209ENST00000488908 NADSYN1Q6IA69 706 aa3.35□□□□□ -1.87
CCDC93-209ENST00000488908 FAM71DQ8N9W8 422 aa3.35□□□□□ -1.87
CCDC93-209ENST00000488908 VPS50Q96JG6 964 aa3.35□□□□□ -1.87
CCDC93-209ENST00000488908 ZBTB45Q96K62 511 aaPredicted RBP3.35□□□□□ -1.87
CCDC93-209ENST00000488908 MAP3K14Q99558 947 aa3.35□□□□□ -1.87
CCDC93-209ENST00000488908 CGRRF1Q99675 332 aa3.35□□□□□ -1.87
CCDC93-209ENST00000488908 DNMT3BQ9UBC3 853 aaKnown RBP3.35□□□□□ -1.87
CCDC93-209ENST00000488908 WNT16Q9UBV4 365 aa3.35□□□□□ -1.87
CCDC93-209ENST00000488908 STAP2Q9UGK3 403 aa3.35□□□□□ -1.87
CCDC93-209ENST00000488908 ASAP1Q9ULH1 1129 aa3.35□□□□□ -1.87
CCDC93-209ENST00000488908 ICAM5Q9UMF0 924 aa3.35□□□□□ -1.87
CCDC93-209ENST00000488908 SPATA31A1Q5TZJ5 1347 aa3.35□□□□□ -1.87
CCDC93-209ENST00000488908 A0A087WYN8 130 aa3.34□□□□□ -1.87
CCDC93-209ENST00000488908 A0A088AWK7 358 aa3.34□□□□□ -1.87
CCDC93-209ENST00000488908 TRBV5-3A0A0A0MS03 114 aa3.34□□□□□ -1.87
CCDC93-209ENST00000488908 SERINC4A6NH21 518 aa3.34□□□□□ -1.87
CCDC93-209ENST00000488908 NTN3O00634 580 aaPredicted RBP3.34□□□□□ -1.87
CCDC93-209ENST00000488908 TBC1D4O60343 1298 aa3.34□□□□□ -1.87
CCDC93-209ENST00000488908 AKAP5P24588 427 aa3.34□□□□□ -1.87
CCDC93-209ENST00000488908 HOXA7P31268 230 aaPredicted RBP3.34□□□□□ -1.87
CCDC93-209ENST00000488908 GATMP50440 423 aa3.34□□□□□ -1.87
CCDC93-209ENST00000488908 PGDP52209 483 aa3.34□□□□□ -1.87
CCDC93-209ENST00000488908 FAM50AQ14320 339 aaKnown RBP3.34□□□□□ -1.87
CCDC93-209ENST00000488908 TMEM240Q5SV17 173 aa3.34□□□□□ -1.87
CCDC93-209ENST00000488908 OTUD3Q5T2D3 398 aaPredicted RBP3.34□□□□□ -1.87
CCDC93-209ENST00000488908 SLC39A5Q6ZMH5 540 aa3.34□□□□□ -1.87
CCDC93-209ENST00000488908 ELP5Q8TE02 316 aa3.34□□□□□ -1.87
CCDC93-209ENST00000488908 OIT3Q8WWZ8 545 aa3.34□□□□□ -1.87
CCDC93-209ENST00000488908 HSPBAP1Q96EW2 488 aa3.34□□□□□ -1.87
CCDC93-209ENST00000488908 DPH1Q9BZG8 443 aa3.34□□□□□ -1.87
CCDC93-209ENST00000488908 MLXIPLQ9NP71 852 aa3.34□□□□□ -1.87
CCDC93-209ENST00000488908 AGO2Q9UKV8 859 aaKnown RBP3.34□□□□□ -1.87
CCDC93-209ENST00000488908 PAXBP1Q9Y5B6 917 aa3.34□□□□□ -1.87
CCDC93-209ENST00000488908 A0A1W2PPC1 479 aa3.33□□□□□ -1.88
CCDC93-209ENST00000488908 TMEM233B4DJY2 109 aa3.33□□□□□ -1.88
CCDC93-209ENST00000488908 ALG1L2C9J202 215 aa3.33□□□□□ -1.88
CCDC93-209ENST00000488908 PRPF4O43172 522 aaKnown RBP eCLIP3.33□□□□□ -1.88
CCDC93-209ENST00000488908 AP1G1O43747 822 aa3.33□□□□□ -1.88
CCDC93-209ENST00000488908 ZNF432O94892 652 aa3.33□□□□□ -1.88
CCDC93-209ENST00000488908 PAPSS2O95340 614 aaPredicted RBP3.33□□□□□ -1.88
CCDC93-209ENST00000488908 NPR1P16066 1061 aa3.33□□□□□ -1.88
CCDC93-209ENST00000488908 HOXA11P31270 313 aaPredicted RBP3.33□□□□□ -1.88
CCDC93-209ENST00000488908 CCDC15Q0P6D6 951 aa3.33□□□□□ -1.88
CCDC93-209ENST00000488908 MTA1Q13330 715 aa3.33□□□□□ -1.88
CCDC93-209ENST00000488908 RBM44Q6ZP01 1051 aaKnown RBP3.33□□□□□ -1.88
CCDC93-209ENST00000488908 TFAP2DQ7Z6R9 452 aa3.33□□□□□ -1.88
CCDC93-209ENST00000488908 RBM23Q86U06 439 aaKnown RBP3.33□□□□□ -1.88
CCDC93-209ENST00000488908 SKAP1Q86WV1 359 aa3.33□□□□□ -1.88
CCDC93-209ENST00000488908 CHPFQ8IZ52 775 aa3.33□□□□□ -1.88
CCDC93-209ENST00000488908 SPSB4Q96A44 273 aa3.33□□□□□ -1.88
CCDC93-209ENST00000488908 MSI2Q96DH6 328 aaKnown RBP3.33□□□□□ -1.88
CCDC93-209ENST00000488908 SMAD5Q99717 465 aaKnown RBP3.33□□□□□ -1.88
CCDC93-209ENST00000488908 CINPQ9BW66 212 aaPredicted RBP3.33□□□□□ -1.88
CCDC93-209ENST00000488908 SPC25Q9HBM1 224 aa3.33□□□□□ -1.88
CCDC93-209ENST00000488908 AGO4Q9HCK5 861 aaKnown RBP3.33□□□□□ -1.88
CCDC93-209ENST00000488908 PLSCR4Q9NRQ2 329 aa3.33□□□□□ -1.88
CCDC93-209ENST00000488908 CAMSAP3Q9P1Y5 1249 aaPredicted RBP3.33□□□□□ -1.88
CCDC93-209ENST00000488908 STEAP1Q9UHE8 339 aa3.33□□□□□ -1.88
CCDC93-209ENST00000488908 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP3.32□□□□□ -1.88
CCDC93-209ENST00000488908 A0A0G2JK05 382 aa3.32□□□□□ -1.88
CCDC93-209ENST00000488908 LOC102723971A0A1B0GUV8 181 aa3.32□□□□□ -1.88
CCDC93-209ENST00000488908 A0A1W2PPL8 197 aa3.32□□□□□ -1.88
CCDC93-209ENST00000488908 PHGDHO43175 533 aaKnown RBP3.32□□□□□ -1.88
CCDC93-209ENST00000488908 CCP110O43303 1012 aa3.32□□□□□ -1.88
CCDC93-209ENST00000488908 PRAMEF2O60811 474 aa3.32□□□□□ -1.88
CCDC93-209ENST00000488908 ATG13O75143 517 aa3.32□□□□□ -1.88
CCDC93-209ENST00000488908 PLGP00747 810 aaPredicted RBP3.32□□□□□ -1.88
CCDC93-209ENST00000488908 ACAA1P09110 424 aaPredicted RBP3.32□□□□□ -1.88
CCDC93-209ENST00000488908 PARP1P09874 1014 aaKnown RBP3.32□□□□□ -1.88
CCDC93-209ENST00000488908 HGFP14210 728 aa3.32□□□□□ -1.88
CCDC93-209ENST00000488908 VCAM1P19320 739 aa3.32□□□□□ -1.88
CCDC93-209ENST00000488908 TFEBP19484 476 aa3.32□□□□□ -1.88
CCDC93-209ENST00000488908 CDKN1CP49918 316 aaPredicted RBP3.32□□□□□ -1.88
CCDC93-209ENST00000488908 WDR5P61964 334 aaKnown RBP3.32□□□□□ -1.88
CCDC93-209ENST00000488908 ODF3L2Q3SX64 289 aa3.32□□□□□ -1.88
CCDC93-209ENST00000488908 NUGGCQ68CJ6 796 aa3.32□□□□□ -1.88
CCDC93-209ENST00000488908 KCTD20Q7Z5Y7 419 aa3.32□□□□□ -1.88
CCDC93-209ENST00000488908 GRAMD1CQ8IYS0 662 aa3.32□□□□□ -1.88
CCDC93-209ENST00000488908 ADGRF4Q8IZF3 695 aa3.32□□□□□ -1.88
CCDC93-209ENST00000488908 LPAR1Q92633 364 aa3.32□□□□□ -1.88
CCDC93-209ENST00000488908 HPS3Q969F9 1004 aa3.32□□□□□ -1.88
CCDC93-209ENST00000488908 C1GALT1C1Q96EU7 318 aa3.32□□□□□ -1.88
CCDC93-209ENST00000488908 P2RY11Q96G91 374 aa3.32□□□□□ -1.88
CCDC93-209ENST00000488908 ZNF518BQ9C0D4 1074 aa3.32□□□□□ -1.88
CCDC93-209ENST00000488908 A1CFQ9NQ94 594 aaKnown RBP3.32□□□□□ -1.88
CCDC93-209ENST00000488908 THSD1Q9NS62 852 aa3.32□□□□□ -1.88
CCDC93-209ENST00000488908 SEMA5BQ9P283 1151 aa3.32□□□□□ -1.88
CCDC93-209ENST00000488908 RIMKLBQ9ULI2 386 aa3.32□□□□□ -1.88
CCDC93-209ENST00000488908 ZNF335Q9H4Z2 1342 aaPredicted RBP3.32□□□□□ -1.88
CCDC93-209ENST00000488908 NOTCH3Q9UM47 2321 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms