RNA–Protein interactions for RNA: ENST00000488905.1

HDAC6-231, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 492 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-231ENST00000488905 ACO1P21399 889 aaKnown RBP19.42■□□□□ 0.7
HDAC6-231ENST00000488905 NTSR1P30989 418 aa19.42■□□□□ 0.7
HDAC6-231ENST00000488905 NFIL3Q16649 462 aa19.42■□□□□ 0.7
HDAC6-231ENST00000488905 PEAR1Q5VY43 1037 aaPredicted RBP19.42■□□□□ 0.7
HDAC6-231ENST00000488905 KLHDC10Q6PID8 442 aa19.42■□□□□ 0.7
HDAC6-231ENST00000488905 INTS8Q75QN2 995 aaKnown RBP19.42■□□□□ 0.7
HDAC6-231ENST00000488905 SPRYD3Q8NCJ5 442 aa19.42■□□□□ 0.7
HDAC6-231ENST00000488905 TAS1R2Q8TE23 839 aa19.42■□□□□ 0.7
HDAC6-231ENST00000488905 CYFIP2Q96F07 1278 aa19.42■□□□□ 0.7
HDAC6-231ENST00000488905 XPO6Q96QU8 1125 aaKnown RBP19.42■□□□□ 0.7
HDAC6-231ENST00000488905 NIF3L1Q9GZT8 377 aa19.42■□□□□ 0.7
HDAC6-231ENST00000488905 CYP3A43Q9HB55 503 aa19.42■□□□□ 0.7
HDAC6-231ENST00000488905 NMUR1Q9HB89 426 aa19.42■□□□□ 0.7
HDAC6-231ENST00000488905 TMEM74BQ9NUR3 256 aa19.42■□□□□ 0.7
HDAC6-231ENST00000488905 MTPAPQ9NVV4 582 aaKnown RBP eCLIP19.42■□□□□ 0.7
HDAC6-231ENST00000488905 CALCOCO1Q9P1Z2 691 aa19.42■□□□□ 0.7
HDAC6-231ENST00000488905 CKAP5Q14008 2032 aa19.41■□□□□ 0.7
HDAC6-231ENST00000488905 A0A1W2PQF6 199 aa19.41■□□□□ 0.7
HDAC6-231ENST00000488905 A0A1W2PQH9 124 aa19.41■□□□□ 0.7
HDAC6-231ENST00000488905 MDM4O15151 490 aa19.41■□□□□ 0.7
HDAC6-231ENST00000488905 AP5Z1O43299 807 aa19.41■□□□□ 0.7
HDAC6-231ENST00000488905 CILPO75339 1184 aa19.41■□□□□ 0.7
HDAC6-231ENST00000488905 RHOBTB3O94955 611 aa19.41■□□□□ 0.7
HDAC6-231ENST00000488905 CEACAM1P13688 526 aa19.41■□□□□ 0.7
HDAC6-231ENST00000488905 CD58P19256 250 aa19.41■□□□□ 0.7
HDAC6-231ENST00000488905 HOXD12P35452 270 aa19.41■□□□□ 0.7
HDAC6-231ENST00000488905 WASP42768 502 aa19.41■□□□□ 0.7
HDAC6-231ENST00000488905 GCLMP48507 274 aa19.41■□□□□ 0.7
HDAC6-231ENST00000488905 RPL6Q02878 288 aaKnown RBP19.41■□□□□ 0.7
HDAC6-231ENST00000488905 PPP3CAQ08209 521 aa19.41■□□□□ 0.7
HDAC6-231ENST00000488905 UAP1L1Q3KQV9 507 aa19.41■□□□□ 0.7
HDAC6-231ENST00000488905 SLC23A3Q6PIS1 610 aa19.41■□□□□ 0.7
HDAC6-231ENST00000488905 TPGS1Q6ZTW0 290 aa19.41■□□□□ 0.7
HDAC6-231ENST00000488905 SPATA32Q96LK8 384 aa19.41■□□□□ 0.7
HDAC6-231ENST00000488905 WDR35Q9P2L0 1181 aa19.41■□□□□ 0.7
HDAC6-231ENST00000488905 PILRBQ9UKJ0 227 aa19.41■□□□□ 0.7
HDAC6-231ENST00000488905 RARGP13631 454 aa19.4■□□□□ 0.7
HDAC6-231ENST00000488905 KRT13P13646 458 aa19.4■□□□□ 0.7
HDAC6-231ENST00000488905 ENGP17813 658 aa19.4■□□□□ 0.7
HDAC6-231ENST00000488905 ITPKAP23677 461 aa19.4■□□□□ 0.7
HDAC6-231ENST00000488905 SYKP43405 635 aa19.4■□□□□ 0.7
HDAC6-231ENST00000488905 MAPK8P45983 427 aa19.4■□□□□ 0.7
HDAC6-231ENST00000488905 ENPEPQ07075 957 aa19.4■□□□□ 0.7
HDAC6-231ENST00000488905 FOXC1Q12948 553 aa19.4■□□□□ 0.7
HDAC6-231ENST00000488905 C10orf120Q5SQS8 335 aa19.4■□□□□ 0.7
HDAC6-231ENST00000488905 SLC36A4Q6YBV0 504 aa19.4■□□□□ 0.7
HDAC6-231ENST00000488905 Q6ZNB5 142 aa19.4■□□□□ 0.7
HDAC6-231ENST00000488905 TOGARAM2Q6ZUX3 1019 aa19.4■□□□□ 0.7
HDAC6-231ENST00000488905 FAM186BQ8IYM0 893 aa19.4■□□□□ 0.7
HDAC6-231ENST00000488905 CHPFQ8IZ52 775 aa19.4■□□□□ 0.7
HDAC6-231ENST00000488905 CCDC47Q96A33 483 aaKnown RBP19.4■□□□□ 0.7
HDAC6-231ENST00000488905 ACOX2Q99424 681 aa19.4■□□□□ 0.7
HDAC6-231ENST00000488905 MMRN2Q9H8L6 949 aa19.4■□□□□ 0.7
HDAC6-231ENST00000488905 CD248Q9HCU0 757 aa19.4■□□□□ 0.7
HDAC6-231ENST00000488905 DNMT3LQ9UJW3 386 aa19.4■□□□□ 0.7
HDAC6-231ENST00000488905 NAGPAQ9UK23 515 aa19.4■□□□□ 0.7
HDAC6-231ENST00000488905 NUDT5Q9UKK9 219 aa19.4■□□□□ 0.7
HDAC6-231ENST00000488905 FAM208BQ5VWN6 2430 aa19.39■□□□□ 0.69
HDAC6-231ENST00000488905 PRRT4C9JH25 899 aa19.39■□□□□ 0.69
HDAC6-231ENST00000488905 NDUFV2P19404 249 aa19.39■□□□□ 0.69
HDAC6-231ENST00000488905 DGKGP49619 791 aa19.39■□□□□ 0.69
HDAC6-231ENST00000488905 PSEN1P49768 467 aa19.39■□□□□ 0.69
HDAC6-231ENST00000488905 NDUFA8P51970 172 aa19.39■□□□□ 0.69
HDAC6-231ENST00000488905 KIF11P52732 1056 aa19.39■□□□□ 0.69
HDAC6-231ENST00000488905 KRT85P78386 507 aa19.39■□□□□ 0.69
HDAC6-231ENST00000488905 DPYDQ12882 1025 aa19.39■□□□□ 0.69
HDAC6-231ENST00000488905 CCDC186Q7Z3E2 898 aa19.39■□□□□ 0.69
HDAC6-231ENST00000488905 DEFB124Q8NES8 71 aa19.39■□□□□ 0.69
HDAC6-231ENST00000488905 GABRG3Q99928 467 aa19.39■□□□□ 0.69
HDAC6-231ENST00000488905 MAPK8IP1Q9UQF2 711 aa19.39■□□□□ 0.69
HDAC6-231ENST00000488905 IGHV1OR15-9A0A0B4J2B8 117 aa19.38■□□□□ 0.69
HDAC6-231ENST00000488905 FAM237AA0A1B0GTK4 181 aa19.38■□□□□ 0.69
HDAC6-231ENST00000488905 ZNF217O75362 1048 aa19.38■□□□□ 0.69
HDAC6-231ENST00000488905 STC2O76061 302 aa19.38■□□□□ 0.69
HDAC6-231ENST00000488905 CFIP05156 583 aa19.38■□□□□ 0.69
HDAC6-231ENST00000488905 PLA2G4AP47712 749 aa19.38■□□□□ 0.69
HDAC6-231ENST00000488905 PPP1R26Q5T8A7 1209 aaPredicted RBP19.38■□□□□ 0.69
HDAC6-231ENST00000488905 SDE2Q6IQ49 451 aa19.38■□□□□ 0.69
HDAC6-231ENST00000488905 KIAA1211LQ6NV74 962 aa19.38■□□□□ 0.69
HDAC6-231ENST00000488905 TADA2BQ86TJ2 420 aa19.38■□□□□ 0.69
HDAC6-231ENST00000488905 GUF1Q8N442 669 aaKnown RBP19.38■□□□□ 0.69
HDAC6-231ENST00000488905 CCDC150Q8NCX0 1101 aa19.38■□□□□ 0.69
HDAC6-231ENST00000488905 IPO4Q8TEX9 1081 aaKnown RBP19.38■□□□□ 0.69
HDAC6-231ENST00000488905 BHMTQ93088 406 aa19.38■□□□□ 0.69
HDAC6-231ENST00000488905 DUSP16Q9BY84 665 aa19.38■□□□□ 0.69
HDAC6-231ENST00000488905 DNAI2Q9GZS0 605 aa19.38■□□□□ 0.69
HDAC6-231ENST00000488905 TMEM8AQ9HCN3 771 aa19.38■□□□□ 0.69
HDAC6-231ENST00000488905 WASF3Q9UPY6 502 aa19.38■□□□□ 0.69
HDAC6-231ENST00000488905 FREM2Q5SZK8 3169 aa19.38■□□□□ 0.69
HDAC6-231ENST00000488905 ZBTB24O43167 697 aaPredicted RBP19.37■□□□□ 0.69
HDAC6-231ENST00000488905 PROS1P07225 676 aa19.37■□□□□ 0.69
HDAC6-231ENST00000488905 RPL13P26373 211 aaKnown RBP19.37■□□□□ 0.69
HDAC6-231ENST00000488905 PSMC2P35998 433 aaKnown RBP19.37■□□□□ 0.69
HDAC6-231ENST00000488905 ZNF33AQ06730 810 aa19.37■□□□□ 0.69
HDAC6-231ENST00000488905 DUOXA1Q1HG43 343 aa19.37■□□□□ 0.69
HDAC6-231ENST00000488905 UNQ6494/PRO21346Q6UXR6 183 aa19.37■□□□□ 0.69
HDAC6-231ENST00000488905 RABEPKQ7Z6M1 372 aa19.37■□□□□ 0.69
HDAC6-231ENST00000488905 SCD5Q86SK9 330 aa19.37■□□□□ 0.69
HDAC6-231ENST00000488905 DEFB119Q8N690 84 aa19.37■□□□□ 0.69
HDAC6-231ENST00000488905 CEP76Q8TAP6 659 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms