RNA–Protein interactions for RNA: ENST00000488765.1

MCF2L-229, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 3,205 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-229ENST00000488765 RPL7AP62424 266 aaKnown RBP16.74■□□□□ 0.27
MCF2L-229ENST00000488765 ZNF423Q2M1K9 1284 aa16.74■□□□□ 0.27
MCF2L-229ENST00000488765 OGFRL1Q5TC84 451 aaPredicted RBP16.74■□□□□ 0.27
MCF2L-229ENST00000488765 RNF19BQ6ZMZ0 732 aa16.74■□□□□ 0.27
MCF2L-229ENST00000488765 RTKN2Q8IZC4 609 aa16.74■□□□□ 0.27
MCF2L-229ENST00000488765 NLRP7Q8WX94 980 aa16.74■□□□□ 0.27
MCF2L-229ENST00000488765 BTBD9Q96Q07 612 aa16.74■□□□□ 0.27
MCF2L-229ENST00000488765 CDRT15Q96T59 188 aa16.74■□□□□ 0.27
MCF2L-229ENST00000488765 NUF2Q9BZD4 464 aa16.74■□□□□ 0.27
MCF2L-229ENST00000488765 EPS8L2Q9H6S3 715 aa16.74■□□□□ 0.27
MCF2L-229ENST00000488765 PCDH12Q9NPG4 1184 aa16.74■□□□□ 0.27
MCF2L-229ENST00000488765 RNF11Q9Y3C5 154 aa16.74■□□□□ 0.27
MCF2L-229ENST00000488765 ST14Q9Y5Y6 855 aa16.74■□□□□ 0.27
MCF2L-229ENST00000488765 KBTBD13C9JR72 458 aa16.74■□□□□ 0.27
MCF2L-229ENST00000488765 ZNF536O15090 1300 aa16.74■□□□□ 0.27
MCF2L-229ENST00000488765 KRT1P04264 644 aa16.74■□□□□ 0.27
MCF2L-229ENST00000488765 F7P08709 466 aaPredicted RBP16.74■□□□□ 0.27
MCF2L-229ENST00000488765 WEE2P0C1S8 567 aa16.74■□□□□ 0.27
MCF2L-229ENST00000488765 XRCC1P18887 633 aaPredicted RBP16.74■□□□□ 0.27
MCF2L-229ENST00000488765 MX2P20592 715 aa16.74■□□□□ 0.27
MCF2L-229ENST00000488765 NUDT2P50583 147 aa16.74■□□□□ 0.27
MCF2L-229ENST00000488765 CETN1Q12798 172 aa16.74■□□□□ 0.27
MCF2L-229ENST00000488765 TATDN1Q6P1N9 297 aa16.74■□□□□ 0.27
MCF2L-229ENST00000488765 KCNT2Q6UVM3 1135 aa16.74■□□□□ 0.27
MCF2L-229ENST00000488765 KBTBD6Q86V97 674 aa16.74■□□□□ 0.27
MCF2L-229ENST00000488765 FBXW8Q8N3Y1 598 aa16.74■□□□□ 0.27
MCF2L-229ENST00000488765 NAT16Q8N8M0 369 aa16.74■□□□□ 0.27
MCF2L-229ENST00000488765 P2RX7Q99572 595 aaKnown RBP16.74■□□□□ 0.27
MCF2L-229ENST00000488765 TDRD3Q9H7E2 651 aaKnown RBP16.74■□□□□ 0.27
MCF2L-229ENST00000488765 TCRBV9S1A1TA0A576 114 aa16.73■□□□□ 0.27
MCF2L-229ENST00000488765 DDX39AO00148 427 aaKnown RBP16.73■□□□□ 0.27
MCF2L-229ENST00000488765 MCF2LO15068 1137 aa16.73■□□□□ 0.27
MCF2L-229ENST00000488765 DENRO43583 198 aaKnown RBP16.73■□□□□ 0.27
MCF2L-229ENST00000488765 IDO1P14902 403 aa16.73■□□□□ 0.27
MCF2L-229ENST00000488765 FLOT2Q14254 428 aa16.73■□□□□ 0.27
MCF2L-229ENST00000488765 NR1D2Q14995 579 aa16.73■□□□□ 0.27
MCF2L-229ENST00000488765 NDUFAF2Q8N183 169 aa16.73■□□□□ 0.27
MCF2L-229ENST00000488765 CERKQ8TCT0 537 aa16.73■□□□□ 0.27
MCF2L-229ENST00000488765 VPS50Q96JG6 964 aa16.73■□□□□ 0.27
MCF2L-229ENST00000488765 GPRC5DQ9NZD1 345 aa16.73■□□□□ 0.27
MCF2L-229ENST00000488765 SF3B1O75533 1304 aaKnown RBP eCLIP16.73■□□□□ 0.27
MCF2L-229ENST00000488765 C7orf72A4D263 438 aa16.73■□□□□ 0.27
MCF2L-229ENST00000488765 NEMP1O14524 444 aa16.73■□□□□ 0.27
MCF2L-229ENST00000488765 ENTPD3O75355 529 aa16.73■□□□□ 0.27
MCF2L-229ENST00000488765 KRT38O76015 456 aa16.73■□□□□ 0.27
MCF2L-229ENST00000488765 TMEM63AO94886 807 aa16.73■□□□□ 0.27
MCF2L-229ENST00000488765 KCNH1O95259 989 aa16.73■□□□□ 0.27
MCF2L-229ENST00000488765 SERPINA6P08185 405 aa16.73■□□□□ 0.27
MCF2L-229ENST00000488765 ZNF76P36508 570 aa16.73■□□□□ 0.27
MCF2L-229ENST00000488765 PCYT1AP49585 367 aa16.73■□□□□ 0.27
MCF2L-229ENST00000488765 CDK9P50750 372 aaKnown RBP16.73■□□□□ 0.27
MCF2L-229ENST00000488765 AOC3Q16853 763 aa16.73■□□□□ 0.27
MCF2L-229ENST00000488765 SNRNP48Q6IEG0 339 aaKnown RBP16.73■□□□□ 0.27
MCF2L-229ENST00000488765 CDC42EP5Q6NZY7 148 aa16.73■□□□□ 0.27
MCF2L-229ENST00000488765 BHLHE22Q8NFJ8 381 aaPredicted RBP16.73■□□□□ 0.27
MCF2L-229ENST00000488765 USP33Q8TEY7 942 aa16.73■□□□□ 0.27
MCF2L-229ENST00000488765 THEGQ9P2T0 379 aa16.73■□□□□ 0.27
MCF2L-229ENST00000488765 STK24Q9Y6E0 443 aa16.73■□□□□ 0.27
MCF2L-229ENST00000488765 FAM86B1E9PN63 330 aa16.72■□□□□ 0.27
MCF2L-229ENST00000488765 AMHP03971 560 aa16.72■□□□□ 0.27
MCF2L-229ENST00000488765 FAM86B2P0C5J1 330 aa16.72■□□□□ 0.27
MCF2L-229ENST00000488765 TKTP29401 623 aaKnown RBP16.72■□□□□ 0.27
MCF2L-229ENST00000488765 ACAD10Q6JQN1 1059 aa16.72■□□□□ 0.27
MCF2L-229ENST00000488765 VASH1Q7L8A9 365 aaPredicted RBP16.72■□□□□ 0.27
MCF2L-229ENST00000488765 CROCCP3Q8IVE0 287 aa16.72■□□□□ 0.27
MCF2L-229ENST00000488765 EHD1Q9H4M9 534 aa16.72■□□□□ 0.27
MCF2L-229ENST00000488765 PARVGQ9HBI0 331 aa16.72■□□□□ 0.27
MCF2L-229ENST00000488765 HESX1Q9UBX0 185 aa16.72■□□□□ 0.27
MCF2L-229ENST00000488765 XPO7Q9UIA9 1087 aaKnown RBP16.72■□□□□ 0.27
MCF2L-229ENST00000488765 CACNA1SQ13698 1873 aa16.72■□□□□ 0.27
MCF2L-229ENST00000488765 ARHGEF37A1IGU5 675 aa16.72■□□□□ 0.27
MCF2L-229ENST00000488765 ENO3P13929 434 aaPredicted RBP16.72■□□□□ 0.27
MCF2L-229ENST00000488765 ZNF182P17025 639 aaPredicted RBP16.72■□□□□ 0.27
MCF2L-229ENST00000488765 MXI1P50539 228 aa16.72■□□□□ 0.27
MCF2L-229ENST00000488765 PPP4CP60510 307 aa16.72■□□□□ 0.27
MCF2L-229ENST00000488765 RPS6P62753 249 aaKnown RBP16.72■□□□□ 0.27
MCF2L-229ENST00000488765 MS4A2Q01362 244 aa16.72■□□□□ 0.27
MCF2L-229ENST00000488765 CENPCQ03188 943 aa16.72■□□□□ 0.27
MCF2L-229ENST00000488765 TRAF2Q12933 501 aa16.72■□□□□ 0.27
MCF2L-229ENST00000488765 PPP2R5DQ14738 602 aa16.72■□□□□ 0.27
MCF2L-229ENST00000488765 SLC9A4Q6AI14 798 aa16.72■□□□□ 0.27
MCF2L-229ENST00000488765 C16orf86Q6ZW13 317 aa16.72■□□□□ 0.27
MCF2L-229ENST00000488765 BTLAQ7Z6A9 289 aa16.72■□□□□ 0.27
MCF2L-229ENST00000488765 AHI1Q8N157 1196 aa16.72■□□□□ 0.27
MCF2L-229ENST00000488765 NEDD1Q8NHV4 660 aa16.72■□□□□ 0.27
MCF2L-229ENST00000488765 ISOC1Q96CN7 298 aa16.72■□□□□ 0.27
MCF2L-229ENST00000488765 MARK4Q96L34 752 aa16.72■□□□□ 0.27
MCF2L-229ENST00000488765 RANBP9Q96S59 729 aa16.72■□□□□ 0.27
MCF2L-229ENST00000488765 EIF2AK1Q9BQI3 630 aaKnown RBP16.72■□□□□ 0.27
MCF2L-229ENST00000488765 GBA3Q9H227 469 aa16.72■□□□□ 0.27
MCF2L-229ENST00000488765 ACSS3Q9H6R3 686 aa16.72■□□□□ 0.27
MCF2L-229ENST00000488765 C17orf75Q9HAS0 396 aa16.72■□□□□ 0.27
MCF2L-229ENST00000488765 XAB2Q9HCS7 855 aaKnown RBP16.72■□□□□ 0.27
MCF2L-229ENST00000488765 SLC17A6Q9P2U8 582 aa16.72■□□□□ 0.27
MCF2L-229ENST00000488765 CNTNAP2Q9UHC6 1331 aa16.72■□□□□ 0.27
MCF2L-229ENST00000488765 IQANK1A0A1B0GTG1 560 aa16.72■□□□□ 0.27
MCF2L-229ENST00000488765 SDR42E2A6NKP2 422 aa16.72■□□□□ 0.27
MCF2L-229ENST00000488765 AP1G1O43747 822 aa16.72■□□□□ 0.27
MCF2L-229ENST00000488765 CCNT2O60583 730 aaKnown RBP16.72■□□□□ 0.27
MCF2L-229ENST00000488765 RPA1P27694 616 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms