RNA–Protein interactions for RNA: ENST00000488727.5

CCM2-216, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,719 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-216ENST00000488727 C8orf74Q6P047 294 aa20.27■□□□□ 0.84
CCM2-216ENST00000488727 TMEM35BQ8NCS4 154 aa20.27■□□□□ 0.84
CCM2-216ENST00000488727 SHKBP1Q8TBC3 707 aa20.27■□□□□ 0.84
CCM2-216ENST00000488727 CALR3Q96L12 384 aaKnown RBP20.27■□□□□ 0.84
CCM2-216ENST00000488727 HSFY1Q96LI6 401 aa20.27■□□□□ 0.84
CCM2-216ENST00000488727 NECTIN4Q96NY8 510 aa20.27■□□□□ 0.84
CCM2-216ENST00000488727 CPXM1Q96SM3 734 aa20.27■□□□□ 0.84
CCM2-216ENST00000488727 SLC4A5Q9BY07 1137 aa20.27■□□□□ 0.84
CCM2-216ENST00000488727 LRRC4Q9HBW1 653 aa20.27■□□□□ 0.84
CCM2-216ENST00000488727 MED4Q9NPJ6 270 aa20.27■□□□□ 0.84
CCM2-216ENST00000488727 COMMD8Q9NX08 183 aa20.27■□□□□ 0.84
CCM2-216ENST00000488727 UXTQ9UBK9 157 aaPredicted RBP20.27■□□□□ 0.84
CCM2-216ENST00000488727 DMGDHQ9UI17 866 aaKnown RBP20.27■□□□□ 0.84
CCM2-216ENST00000488727 LSM8O95777 96 aaKnown RBP20.27■□□□□ 0.83
CCM2-216ENST00000488727 MYBL2P10244 700 aa20.27■□□□□ 0.83
CCM2-216ENST00000488727 LCP1P13796 627 aa20.27■□□□□ 0.83
CCM2-216ENST00000488727 TNFAIP3P21580 790 aa20.27■□□□□ 0.83
CCM2-216ENST00000488727 FSHRP23945 695 aa20.27■□□□□ 0.83
CCM2-216ENST00000488727 PGFP49763 221 aa20.27■□□□□ 0.83
CCM2-216ENST00000488727 SMAD2Q15796 467 aaKnown RBP20.27■□□□□ 0.83
CCM2-216ENST00000488727 NAA35Q5VZE5 725 aa20.27■□□□□ 0.83
CCM2-216ENST00000488727 POTEHQ6S545 545 aa20.27■□□□□ 0.83
CCM2-216ENST00000488727 ACTRT1Q8TDG2 376 aa20.27■□□□□ 0.83
CCM2-216ENST00000488727 CPA5Q8WXQ8 436 aa20.27■□□□□ 0.83
CCM2-216ENST00000488727 FBXO32Q969P5 355 aa20.27■□□□□ 0.83
CCM2-216ENST00000488727 FBXO44Q9H4M3 255 aa20.27■□□□□ 0.83
CCM2-216ENST00000488727 TMEM59LQ9UK28 342 aa20.27■□□□□ 0.83
CCM2-216ENST00000488727 MRPS23Q9Y3D9 190 aaKnown RBP20.27■□□□□ 0.83
CCM2-216ENST00000488727 CEP83Q9Y592 693 aa20.27■□□□□ 0.83
CCM2-216ENST00000488727 E5RJQ4 531 aa20.26■□□□□ 0.83
CCM2-216ENST00000488727 USP17L7P0C7H9 530 aa20.26■□□□□ 0.83
CCM2-216ENST00000488727 UNGP13051 313 aaPredicted RBP20.26■□□□□ 0.83
CCM2-216ENST00000488727 IL9P15248 144 aa20.26■□□□□ 0.83
CCM2-216ENST00000488727 CEBPBP17676 345 aa20.26■□□□□ 0.83
CCM2-216ENST00000488727 CYP4F8P98187 520 aa20.26■□□□□ 0.83
CCM2-216ENST00000488727 TCEAL1Q15170 157 aa20.26■□□□□ 0.83
CCM2-216ENST00000488727 PTPN20Q4JDL3 420 aa20.26■□□□□ 0.83
CCM2-216ENST00000488727 STXBP5Q5T5C0 1151 aa20.26■□□□□ 0.83
CCM2-216ENST00000488727 TMEM110Q86TL2 294 aa20.26■□□□□ 0.83
CCM2-216ENST00000488727 FAM71BQ8TC56 605 aa20.26■□□□□ 0.83
CCM2-216ENST00000488727 ING5Q8WYH8 240 aa20.26■□□□□ 0.83
CCM2-216ENST00000488727 NDRG1Q92597 394 aaKnown RBP20.26■□□□□ 0.83
CCM2-216ENST00000488727 SELENOOQ9BVL4 669 aa20.26■□□□□ 0.83
CCM2-216ENST00000488727 ULBP1Q9BZM6 244 aa20.26■□□□□ 0.83
CCM2-216ENST00000488727 SEPT11Q9NVA2 429 aaKnown RBP20.26■□□□□ 0.83
CCM2-216ENST00000488727 GMIPQ9P107 970 aa20.26■□□□□ 0.83
CCM2-216ENST00000488727 HPCAL4Q9UM19 191 aa20.26■□□□□ 0.83
CCM2-216ENST00000488727 PACSIN2Q9UNF0 486 aaPredicted RBP20.26■□□□□ 0.83
CCM2-216ENST00000488727 SCML2Q9UQR0 700 aa20.26■□□□□ 0.83
CCM2-216ENST00000488727 POLR3GO15318 223 aaPredicted RBP20.25■□□□□ 0.83
CCM2-216ENST00000488727 HADHBP55084 474 aaKnown RBP20.25■□□□□ 0.83
CCM2-216ENST00000488727 TEAD2Q15562 447 aa20.25■□□□□ 0.83
CCM2-216ENST00000488727 CLEC16AQ2KHT3 1053 aa20.25■□□□□ 0.83
CCM2-216ENST00000488727 PM20D1Q6GTS8 502 aa20.25■□□□□ 0.83
CCM2-216ENST00000488727 TRIM72Q6ZMU5 477 aa20.25■□□□□ 0.83
CCM2-216ENST00000488727 GET4Q7L5D6 327 aaPredicted RBP20.25■□□□□ 0.83
CCM2-216ENST00000488727 BHLHA9Q7RTU4 235 aa20.25■□□□□ 0.83
CCM2-216ENST00000488727 SIX6OS1Q8N1H7 587 aa20.25■□□□□ 0.83
CCM2-216ENST00000488727 CLEC4CQ8WTT0 213 aa20.25■□□□□ 0.83
CCM2-216ENST00000488727 SLITRK1Q96PX8 696 aa20.25■□□□□ 0.83
CCM2-216ENST00000488727 ATXN3LQ9H3M9 355 aa20.25■□□□□ 0.83
CCM2-216ENST00000488727 CHORDC1Q9UHD1 332 aaPredicted RBP20.25■□□□□ 0.83
CCM2-216ENST00000488727 ANKRD62A6NC57 917 aa20.24■□□□□ 0.83
CCM2-216ENST00000488727 ZNF197O14709 1029 aa20.24■□□□□ 0.83
CCM2-216ENST00000488727 ZBED1O96006 694 aa20.24■□□□□ 0.83
CCM2-216ENST00000488727 CDC25CP30307 473 aa20.24■□□□□ 0.83
CCM2-216ENST00000488727 TNNT3P45378 269 aaPredicted RBP20.24■□□□□ 0.83
CCM2-216ENST00000488727 PEX26Q7Z412 305 aa20.24■□□□□ 0.83
CCM2-216ENST00000488727 NT5DC3Q86UY8 548 aa20.24■□□□□ 0.83
CCM2-216ENST00000488727 SCUBE3Q8IX30 993 aa20.24■□□□□ 0.83
CCM2-216ENST00000488727 CTNNBL1Q8WYA6 563 aaPredicted RBP20.24■□□□□ 0.83
CCM2-216ENST00000488727 CYLDQ9NQC7 956 aa20.24■□□□□ 0.83
CCM2-216ENST00000488727 ZNF840PA6NDX5 716 aa20.24■□□□□ 0.83
CCM2-216ENST00000488727 KCNK3O14649 394 aa20.24■□□□□ 0.83
CCM2-216ENST00000488727 PAPSS1O43252 624 aaPredicted RBP20.24■□□□□ 0.83
CCM2-216ENST00000488727 FGF19O95750 216 aa20.24■□□□□ 0.83
CCM2-216ENST00000488727 ERBB2P04626 1255 aa20.24■□□□□ 0.83
CCM2-216ENST00000488727 ZDHHC11BP0C7U3 371 aa20.24■□□□□ 0.83
CCM2-216ENST00000488727 ACADSBP45954 432 aa20.24■□□□□ 0.83
CCM2-216ENST00000488727 CENPCQ03188 943 aa20.24■□□□□ 0.83
CCM2-216ENST00000488727 PUS10Q3MIT2 529 aaKnown RBP20.24■□□□□ 0.83
CCM2-216ENST00000488727 C2CD6Q53TS8 623 aa20.24■□□□□ 0.83
CCM2-216ENST00000488727 EMBQ6PCB8 327 aa20.24■□□□□ 0.83
CCM2-216ENST00000488727 DNAAF5Q86Y56 855 aa20.24■□□□□ 0.83
CCM2-216ENST00000488727 NPAS3Q8IXF0 933 aa20.24■□□□□ 0.83
CCM2-216ENST00000488727 RASGEF1CQ8N431 466 aa20.24■□□□□ 0.83
CCM2-216ENST00000488727 OVCA2Q8WZ82 227 aa20.24■□□□□ 0.83
CCM2-216ENST00000488727 FGF13Q92913 245 aa20.24■□□□□ 0.83
CCM2-216ENST00000488727 HES6Q96HZ4 224 aa20.24■□□□□ 0.83
CCM2-216ENST00000488727 MIS12Q9H081 205 aa20.24■□□□□ 0.83
CCM2-216ENST00000488727 NMUR1Q9HB89 426 aa20.24■□□□□ 0.83
CCM2-216ENST00000488727 CNGB3Q9NQW8 809 aa20.24■□□□□ 0.83
CCM2-216ENST00000488727 GDF3Q9NR23 364 aa20.24■□□□□ 0.83
CCM2-216ENST00000488727 OSER1Q9NX31 292 aa20.24■□□□□ 0.83
CCM2-216ENST00000488727 TAS2R14Q9NYV8 317 aa20.24■□□□□ 0.83
CCM2-216ENST00000488727 SP100P23497 879 aaPredicted RBP20.23■□□□□ 0.83
CCM2-216ENST00000488727 DAOAP59103 153 aa20.23■□□□□ 0.83
CCM2-216ENST00000488727 NNTQ13423 1086 aa20.23■□□□□ 0.83
CCM2-216ENST00000488727 SCD5Q86SK9 330 aa20.23■□□□□ 0.83
CCM2-216ENST00000488727 SCML4Q8N228 414 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms