RNA–Protein interactions for RNA: ENST00000488535.2

ABCA2-219, Transcript of ATP binding cassette subfamily A member 2, human

TSL 1 (best)

Gene ABCA2, Length 3,327 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCA2-219	ENST00000488535	ALKBH8	Q96BT7	664 aa	Known RBP	13.58	□□□□□ -0.24
ABCA2-219	ENST00000488535	SLC9A2	Q9UBY0	812 aa		13.58	□□□□□ -0.24
ABCA2-219	ENST00000488535	CRTAM	O95727	393 aa		13.58	□□□□□ -0.24
ABCA2-219	ENST00000488535	CCDC166	P0CW27	439 aa		13.58	□□□□□ -0.24
ABCA2-219	ENST00000488535	RBP3	P10745	1247 aa		13.58	□□□□□ -0.24
ABCA2-219	ENST00000488535	PSMA2	P25787	234 aa		13.58	□□□□□ -0.24
ABCA2-219	ENST00000488535	ADSS	P30520	456 aa		13.58	□□□□□ -0.24
ABCA2-219	ENST00000488535	SLC5A2	P31639	672 aa		13.58	□□□□□ -0.24
ABCA2-219	ENST00000488535	SFSWAP	Q12872	951 aa	Known RBP	13.58	□□□□□ -0.24
ABCA2-219	ENST00000488535	PHTF2	Q8N3S3	785 aa		13.58	□□□□□ -0.24
ABCA2-219	ENST00000488535	GAB3	Q8WWW8	586 aa		13.58	□□□□□ -0.24
ABCA2-219	ENST00000488535	TMA16	Q96EY4	203 aa	Known RBP	13.58	□□□□□ -0.24
ABCA2-219	ENST00000488535	ZC3H7B	Q9UGR2	993 aa	Known RBP	13.58	□□□□□ -0.24
ABCA2-219	ENST00000488535	GNE	Q9Y223	722 aa	Known RBP	13.58	□□□□□ -0.24
ABCA2-219	ENST00000488535	TSC22D4	Q9Y3Q8	395 aa		13.58	□□□□□ -0.24
ABCA2-219	ENST00000488535	MTA2	O94776	668 aa		13.57	□□□□□ -0.24
ABCA2-219	ENST00000488535	STIP1	P31948	543 aa	Known RBP	13.57	□□□□□ -0.24
ABCA2-219	ENST00000488535	CRADD	P78560	199 aa		13.57	□□□□□ -0.24
ABCA2-219	ENST00000488535	TNFAIP1	Q13829	316 aa		13.57	□□□□□ -0.24
ABCA2-219	ENST00000488535	FLOT2	Q14254	428 aa		13.57	□□□□□ -0.24
ABCA2-219	ENST00000488535	HSF5	Q4G112	596 aa	Predicted RBP	13.57	□□□□□ -0.24
ABCA2-219	ENST00000488535	ZC3H8	Q8N5P1	291 aa	Known RBP eCLIP	13.57	□□□□□ -0.24
ABCA2-219	ENST00000488535	FEZF2	Q8TBJ5	459 aa		13.57	□□□□□ -0.24
ABCA2-219	ENST00000488535	PPP4R1	Q8TF05	950 aa		13.57	□□□□□ -0.24
ABCA2-219	ENST00000488535	EME1	Q96AY2	570 aa		13.57	□□□□□ -0.24
ABCA2-219	ENST00000488535	PRICKLE1	Q96MT3	831 aa	Predicted RBP	13.57	□□□□□ -0.24
ABCA2-219	ENST00000488535	TEKT3	Q9BXF9	490 aa		13.57	□□□□□ -0.24
ABCA2-219	ENST00000488535	RNPEP	Q9H4A4	650 aa		13.57	□□□□□ -0.24
ABCA2-219	ENST00000488535	RRN3	Q9NYV6	651 aa		13.57	□□□□□ -0.24
ABCA2-219	ENST00000488535	ZHX2	Q9Y6X8	837 aa		13.57	□□□□□ -0.24
ABCA2-219	ENST00000488535	SMCHD1	A6NHR9	2005 aa		13.57	□□□□□ -0.24
ABCA2-219	ENST00000488535	CNTNAP2	Q9UHC6	1331 aa		13.57	□□□□□ -0.24
ABCA2-219	ENST00000488535	PSTPIP1	O43586	416 aa		13.57	□□□□□ -0.24
ABCA2-219	ENST00000488535	FOS	P01100	380 aa	Predicted RBP	13.57	□□□□□ -0.24
ABCA2-219	ENST00000488535	MX2	P20592	715 aa		13.57	□□□□□ -0.24
ABCA2-219	ENST00000488535	SREBF1	P36956	1147 aa		13.57	□□□□□ -0.24
ABCA2-219	ENST00000488535	ABCG1	P45844	678 aa		13.57	□□□□□ -0.24
ABCA2-219	ENST00000488535	FASTKD1	Q53R41	847 aa	Known RBP	13.57	□□□□□ -0.24
ABCA2-219	ENST00000488535	TFDP3	Q5H9I0	405 aa		13.57	□□□□□ -0.24
ABCA2-219	ENST00000488535	RARS2	Q5T160	578 aa	Known RBP	13.57	□□□□□ -0.24
ABCA2-219	ENST00000488535	SCYL2	Q6P3W7	929 aa		13.57	□□□□□ -0.24
ABCA2-219	ENST00000488535	UGT2A3	Q6UWM9	527 aa		13.57	□□□□□ -0.24
ABCA2-219	ENST00000488535	FRMD7	Q6ZUT3	714 aa		13.57	□□□□□ -0.24
ABCA2-219	ENST00000488535	RCOR2	Q8IZ40	523 aa		13.57	□□□□□ -0.24
ABCA2-219	ENST00000488535	UNC5B	Q8IZJ1	945 aa		13.57	□□□□□ -0.24
ABCA2-219	ENST00000488535	TTC13	Q8NBP0	860 aa		13.57	□□□□□ -0.24
ABCA2-219	ENST00000488535	SPATA18	Q8TC71	538 aa		13.57	□□□□□ -0.24
ABCA2-219	ENST00000488535	TRAF3IP1	Q8TDR0	691 aa	Predicted RBP	13.57	□□□□□ -0.24
ABCA2-219	ENST00000488535	DDX1	Q92499	740 aa	Known RBP	13.57	□□□□□ -0.24
ABCA2-219	ENST00000488535	ZNF512	Q96ME7	567 aa	Predicted RBP	13.57	□□□□□ -0.24
ABCA2-219	ENST00000488535	WDR83	Q9BRX9	315 aa	Known RBP	13.57	□□□□□ -0.24
ABCA2-219	ENST00000488535	ARHGAP26	Q9UNA1	814 aa		13.57	□□□□□ -0.24
ABCA2-219	ENST00000488535	SHOC2	Q9UQ13	582 aa		13.57	□□□□□ -0.24
ABCA2-219	ENST00000488535	MRPL11	Q9Y3B7	192 aa	Known RBP	13.57	□□□□□ -0.24
ABCA2-219	ENST00000488535	HBS1L	Q9Y450	684 aa	Known RBP	13.57	□□□□□ -0.24
ABCA2-219	ENST00000488535	CDK5RAP2	Q96SN8	1893 aa		13.57	□□□□□ -0.24
ABCA2-219	ENST00000488535	TPD52L2	O43399	206 aa	Known RBP	13.57	□□□□□ -0.24
ABCA2-219	ENST00000488535	CSDE1	O75534	798 aa	Known RBP	13.57	□□□□□ -0.24
ABCA2-219	ENST00000488535	CD1E	P15812	388 aa		13.57	□□□□□ -0.24
ABCA2-219	ENST00000488535	TGFB2	P61812	414 aa		13.57	□□□□□ -0.24
ABCA2-219	ENST00000488535	TAF5	Q15542	800 aa		13.57	□□□□□ -0.24
ABCA2-219	ENST00000488535	C16orf87	Q6PH81	154 aa		13.57	□□□□□ -0.24
ABCA2-219	ENST00000488535	PATL1	Q86TB9	770 aa	Known RBP	13.57	□□□□□ -0.24
ABCA2-219	ENST00000488535	ZBTB8B	Q8NAP8	495 aa	Predicted RBP	13.57	□□□□□ -0.24
ABCA2-219	ENST00000488535	DEPDC1B	Q8WUY9	529 aa		13.57	□□□□□ -0.24
ABCA2-219	ENST00000488535	NCSTN	Q92542	709 aa		13.57	□□□□□ -0.24
ABCA2-219	ENST00000488535	SEL1L	Q9UBV2	794 aa		13.57	□□□□□ -0.24
ABCA2-219	ENST00000488535	PCDHB2	Q9Y5E7	798 aa		13.57	□□□□□ -0.24
ABCA2-219	ENST00000488535	ATRNL1	Q5VV63	1379 aa		13.57	□□□□□ -0.24
ABCA2-219	ENST00000488535	STX16-NPEPL1	H3BU86	382 aa		13.56	□□□□□ -0.24
ABCA2-219	ENST00000488535	GRIN3B	O60391	1043 aa		13.56	□□□□□ -0.24
ABCA2-219	ENST00000488535	GTF2H1	P32780	548 aa		13.56	□□□□□ -0.24
ABCA2-219	ENST00000488535	HMGCS2	P54868	508 aa		13.56	□□□□□ -0.24
ABCA2-219	ENST00000488535	PDPK2P	Q6A1A2	396 aa		13.56	□□□□□ -0.24
ABCA2-219	ENST00000488535	FASTKD5	Q7L8L6	764 aa	Known RBP	13.56	□□□□□ -0.24
ABCA2-219	ENST00000488535	CLVS1	Q8IUQ0	354 aa	Predicted RBP	13.56	□□□□□ -0.24
ABCA2-219	ENST00000488535	KATNAL2	Q8IYT4	538 aa		13.56	□□□□□ -0.24
ABCA2-219	ENST00000488535		A0A0B4J269	797 aa		13.56	□□□□□ -0.24
ABCA2-219	ENST00000488535	TESPA1	A2RU30	521 aa	Predicted RBP	13.56	□□□□□ -0.24
ABCA2-219	ENST00000488535	CAPN14	A8MX76	684 aa		13.56	□□□□□ -0.24
ABCA2-219	ENST00000488535	TMX2-CTNND1	H3BSU7	103 aa		13.56	□□□□□ -0.24
ABCA2-219	ENST00000488535	STRN	O43815	780 aa		13.56	□□□□□ -0.24
ABCA2-219	ENST00000488535	PEX10	O60683	326 aa		13.56	□□□□□ -0.24
ABCA2-219	ENST00000488535	SIN3B	O75182	1162 aa		13.56	□□□□□ -0.24
ABCA2-219	ENST00000488535	FAM58BP	P0C7Q3	252 aa		13.56	□□□□□ -0.24
ABCA2-219	ENST00000488535	ALOX15	P16050	662 aa	Predicted RBP	13.56	□□□□□ -0.24
ABCA2-219	ENST00000488535	MMRN1	Q13201	1228 aa		13.56	□□□□□ -0.24
ABCA2-219	ENST00000488535	SPDYA	Q5MJ70	313 aa		13.56	□□□□□ -0.24
ABCA2-219	ENST00000488535	NETO2	Q8NC67	525 aa		13.56	□□□□□ -0.24
ABCA2-219	ENST00000488535	CDRT15	Q96T59	188 aa		13.56	□□□□□ -0.24
ABCA2-219	ENST00000488535	PCDH9	Q9HC56	1237 aa		13.56	□□□□□ -0.24
ABCA2-219	ENST00000488535	KMT5A	Q9NQR1	393 aa		13.56	□□□□□ -0.24
ABCA2-219	ENST00000488535	RBM47	A0AV96	593 aa	Known RBP	13.56	□□□□□ -0.24
ABCA2-219	ENST00000488535	NPM3	O75607	178 aa	Known RBP	13.56	□□□□□ -0.24
ABCA2-219	ENST00000488535	SNRPA	P09012	282 aa	Known RBP	13.56	□□□□□ -0.24
ABCA2-219	ENST00000488535	SMIM18	P0DKX4	95 aa		13.56	□□□□□ -0.24
ABCA2-219	ENST00000488535	RXRG	P48443	463 aa		13.56	□□□□□ -0.24
ABCA2-219	ENST00000488535	RIN3	Q8TB24	985 aa		13.56	□□□□□ -0.24
ABCA2-219	ENST00000488535	DIS3L	Q8TF46	1054 aa	Known RBP	13.56	□□□□□ -0.24
ABCA2-219	ENST00000488535	ABHD8	Q96I13	439 aa		13.56	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms