RNA–Protein interactions for RNA: ENST00000488386.5

CDHR3-213, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 540 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-213ENST00000488386 CTXN3Q4LDR2 81 aa6.39□□□□□ -1.39
CDHR3-213ENST00000488386 LMBRD2Q68DH5 695 aaPredicted RBP6.39□□□□□ -1.39
CDHR3-213ENST00000488386 CWF19L1Q69YN2 538 aaKnown RBP6.39□□□□□ -1.39
CDHR3-213ENST00000488386 ADALQ6DHV7 355 aa6.39□□□□□ -1.39
CDHR3-213ENST00000488386 VHLLQ6RSH7 139 aa6.39□□□□□ -1.39
CDHR3-213ENST00000488386 SHC4Q6S5L8 630 aa6.39□□□□□ -1.39
CDHR3-213ENST00000488386 CRTC3Q6UUV7 619 aa6.39□□□□□ -1.39
CDHR3-213ENST00000488386 PARM1Q6UWI2 310 aa6.39□□□□□ -1.39
CDHR3-213ENST00000488386 CRELD2Q6UXH1 353 aaPredicted RBP6.39□□□□□ -1.39
CDHR3-213ENST00000488386 DSTYKQ6XUX3 929 aa6.39□□□□□ -1.39
CDHR3-213ENST00000488386 ZNF720Q7Z2F6 126 aa6.39□□□□□ -1.39
CDHR3-213ENST00000488386 EFCAB13Q8IY85 973 aa6.39□□□□□ -1.39
CDHR3-213ENST00000488386 GRAMD1CQ8IYS0 662 aa6.39□□□□□ -1.39
CDHR3-213ENST00000488386 LINC00301Q8NCQ3 95 aa6.39□□□□□ -1.39
CDHR3-213ENST00000488386 STKLD1Q8NE28 680 aa6.39□□□□□ -1.39
CDHR3-213ENST00000488386 DHX58Q96C10 678 aa6.39□□□□□ -1.39
CDHR3-213ENST00000488386 TCEAL4Q96EI5 215 aa6.39□□□□□ -1.39
CDHR3-213ENST00000488386 MCRS1Q96EZ8 462 aa6.39□□□□□ -1.39
CDHR3-213ENST00000488386 KXD1Q9BQD3 176 aa6.39□□□□□ -1.39
CDHR3-213ENST00000488386 FOXP3Q9BZS1 431 aa6.39□□□□□ -1.39
CDHR3-213ENST00000488386 KLHL25Q9H0H3 589 aa6.39□□□□□ -1.39
CDHR3-213ENST00000488386 BLZF1Q9H2G9 400 aa6.39□□□□□ -1.39
CDHR3-213ENST00000488386 PLEKHA4Q9H4M7 779 aa6.39□□□□□ -1.39
CDHR3-213ENST00000488386 PCIF1Q9H4Z3 704 aa6.39□□□□□ -1.39
CDHR3-213ENST00000488386 MRPL44Q9H9J2 332 aaKnown RBP6.39□□□□□ -1.39
CDHR3-213ENST00000488386 CYP4F11Q9HBI6 524 aa6.39□□□□□ -1.39
CDHR3-213ENST00000488386 SLC38A7Q9NVC3 462 aa6.39□□□□□ -1.39
CDHR3-213ENST00000488386 ZDHHC7Q9NXF8 308 aa6.39□□□□□ -1.39
CDHR3-213ENST00000488386 KCND2Q9NZV8 630 aa6.39□□□□□ -1.39
CDHR3-213ENST00000488386 CPSF3Q9UKF6 684 aaKnown RBP6.39□□□□□ -1.39
CDHR3-213ENST00000488386 A0A0B4J269 797 aa6.38□□□□□ -1.39
CDHR3-213ENST00000488386 PRRG1O14668 218 aa6.38□□□□□ -1.39
CDHR3-213ENST00000488386 HCRTO43612 131 aa6.38□□□□□ -1.39
CDHR3-213ENST00000488386 TRAPPC3O43617 180 aa6.38□□□□□ -1.39
CDHR3-213ENST00000488386 TBC1D4O60343 1298 aa6.38□□□□□ -1.39
CDHR3-213ENST00000488386 PIGRP01833 764 aa6.38□□□□□ -1.39
CDHR3-213ENST00000488386 EPHX1P07099 455 aa6.38□□□□□ -1.39
CDHR3-213ENST00000488386 HSP90AA1P07900 732 aaKnown RBP6.38□□□□□ -1.39
CDHR3-213ENST00000488386 RHOP08100 348 aa6.38□□□□□ -1.39
CDHR3-213ENST00000488386 CLTAP09496 248 aa6.38□□□□□ -1.39
CDHR3-213ENST00000488386 LAMP2P13473 410 aa6.38□□□□□ -1.39
CDHR3-213ENST00000488386 CEBPBP17676 345 aa6.38□□□□□ -1.39
CDHR3-213ENST00000488386 CD247P20963 164 aa6.38□□□□□ -1.39
CDHR3-213ENST00000488386 RPL9P32969 192 aaKnown RBP6.38□□□□□ -1.39
CDHR3-213ENST00000488386 CCR2P41597 374 aa6.38□□□□□ -1.39
CDHR3-213ENST00000488386 ADCY1Q08828 1119 aa6.38□□□□□ -1.39
CDHR3-213ENST00000488386 TWF1Q12792 350 aa6.38□□□□□ -1.39
CDHR3-213ENST00000488386 TDGQ13569 410 aa6.38□□□□□ -1.39
CDHR3-213ENST00000488386 HTR4Q13639 388 aa6.38□□□□□ -1.39
CDHR3-213ENST00000488386 TMEM132DQ14C87 1099 aa6.38□□□□□ -1.39
CDHR3-213ENST00000488386 ZBTB6Q15916 424 aa6.38□□□□□ -1.39
CDHR3-213ENST00000488386 CCDC142Q17RM4 750 aa6.38□□□□□ -1.39
CDHR3-213ENST00000488386 PABPC1LQ4VXU2 614 aaKnown RBP6.38□□□□□ -1.39
CDHR3-213ENST00000488386 ANKRD39Q53RE8 183 aa6.38□□□□□ -1.39
CDHR3-213ENST00000488386 MRM1Q6IN84 353 aaKnown RBP6.38□□□□□ -1.39
CDHR3-213ENST00000488386 KIAA1211LQ6NV74 962 aa6.38□□□□□ -1.39
CDHR3-213ENST00000488386 C6orf15Q6UXA7 325 aaPredicted RBP6.38□□□□□ -1.39
CDHR3-213ENST00000488386 ANKS3Q6ZW76 656 aa6.38□□□□□ -1.39
CDHR3-213ENST00000488386 BMP8AQ7Z5Y6 402 aa6.38□□□□□ -1.39
CDHR3-213ENST00000488386 SLC44A3Q8N4M1 653 aa6.38□□□□□ -1.39
CDHR3-213ENST00000488386 TTC9BQ8N6N2 239 aa6.38□□□□□ -1.39
CDHR3-213ENST00000488386 CELF2-AS1Q8N7Q2 184 aa6.38□□□□□ -1.39
CDHR3-213ENST00000488386 ENOX1Q8TC92 643 aaKnown RBP6.38□□□□□ -1.39
CDHR3-213ENST00000488386 POMGNT1Q8WZA1 660 aa6.38□□□□□ -1.39
CDHR3-213ENST00000488386 FGF13Q92913 245 aa6.38□□□□□ -1.39
CDHR3-213ENST00000488386 SNX21Q969T3 373 aa6.38□□□□□ -1.39
CDHR3-213ENST00000488386 ALPK1Q96QP1 1244 aa6.38□□□□□ -1.39
CDHR3-213ENST00000488386 CBWD1Q9BRT8 395 aa6.38□□□□□ -1.39
CDHR3-213ENST00000488386 FAM213AQ9BRX8 229 aa6.38□□□□□ -1.39
CDHR3-213ENST00000488386 PLA2G2FQ9BZM2 168 aa6.38□□□□□ -1.39
CDHR3-213ENST00000488386 MFSD1Q9H3U5 465 aa6.38□□□□□ -1.39
CDHR3-213ENST00000488386 ZSCAN16Q9H4T2 348 aaPredicted RBP6.38□□□□□ -1.39
CDHR3-213ENST00000488386 PANK4Q9NVE7 773 aa6.38□□□□□ -1.39
CDHR3-213ENST00000488386 EBF1Q9UH73 591 aa6.38□□□□□ -1.39
CDHR3-213ENST00000488386 AGO2Q9UKV8 859 aaKnown RBP6.38□□□□□ -1.39
CDHR3-213ENST00000488386 UBQLN1Q9UMX0 589 aaKnown RBP6.38□□□□□ -1.39
CDHR3-213ENST00000488386 DUSP12Q9UNI6 340 aa6.38□□□□□ -1.39
CDHR3-213ENST00000488386 BACE2Q9Y5Z0 518 aa6.38□□□□□ -1.39
CDHR3-213ENST00000488386 NCANO14594 1321 aa6.37□□□□□ -1.39
CDHR3-213ENST00000488386 H0Y8X5 98 aa6.37□□□□□ -1.39
CDHR3-213ENST00000488386 H0YCG3 227 aa6.37□□□□□ -1.39
CDHR3-213ENST00000488386 SYN3O14994 580 aa6.37□□□□□ -1.39
CDHR3-213ENST00000488386 SLC26A4O43511 780 aa6.37□□□□□ -1.39
CDHR3-213ENST00000488386 ABLIM3O94929 683 aa6.37□□□□□ -1.39
CDHR3-213ENST00000488386 LRG1P02750 347 aa6.37□□□□□ -1.39
CDHR3-213ENST00000488386 ZSCAN22P10073 491 aaPredicted RBP6.37□□□□□ -1.39
CDHR3-213ENST00000488386 MYL4P12829 197 aa6.37□□□□□ -1.39
CDHR3-213ENST00000488386 CD72P21854 359 aa6.37□□□□□ -1.39
CDHR3-213ENST00000488386 LRPAP1P30533 357 aa6.37□□□□□ -1.39
CDHR3-213ENST00000488386 ELF1P32519 619 aa6.37□□□□□ -1.39
CDHR3-213ENST00000488386 AFMP43652 599 aa6.37□□□□□ -1.39
CDHR3-213ENST00000488386 GPC5P78333 572 aa6.37□□□□□ -1.39
CDHR3-213ENST00000488386 ASIC1P78348 528 aa6.37□□□□□ -1.39
CDHR3-213ENST00000488386 YWHAHQ04917 246 aaPredicted RBP6.37□□□□□ -1.39
CDHR3-213ENST00000488386 L1TD1Q5T7N2 865 aaKnown RBP6.37□□□□□ -1.39
CDHR3-213ENST00000488386 SPATA1Q5VX52 437 aa6.37□□□□□ -1.39
CDHR3-213ENST00000488386 C9orf57Q5W0N0 161 aa6.37□□□□□ -1.39
CDHR3-213ENST00000488386 SLC8B1Q6J4K2 584 aa6.37□□□□□ -1.39
CDHR3-213ENST00000488386 ZNF280DQ6N043 979 aa6.37□□□□□ -1.39
CDHR3-213ENST00000488386 CCDC73Q6ZRK6 1079 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms