RNA–Protein interactions for RNA: ENST00000488317.1

SRRM1-215, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 2

Gene SRRM1, Length 333 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-215ENST00000488317 ANKRD40Q6AI12 368 aa5.35□□□□□ -1.55
SRRM1-215ENST00000488317 CCDC144NLQ6NUI1 221 aa5.35□□□□□ -1.55
SRRM1-215ENST00000488317 PIK3AP1Q6ZUJ8 805 aa5.35□□□□□ -1.55
SRRM1-215ENST00000488317 HEATR4Q86WZ0 1026 aa5.35□□□□□ -1.55
SRRM1-215ENST00000488317 NGDNQ8NEJ9 315 aaKnown RBP5.35□□□□□ -1.55
SRRM1-215ENST00000488317 SOCS4Q8WXH5 440 aa5.35□□□□□ -1.55
SRRM1-215ENST00000488317 HERVK_113Q902F9 699 aa5.35□□□□□ -1.55
SRRM1-215ENST00000488317 HVCN1Q96D96 273 aa5.35□□□□□ -1.55
SRRM1-215ENST00000488317 MCRS1Q96EZ8 462 aa5.35□□□□□ -1.55
SRRM1-215ENST00000488317 PGBD1Q96JS3 809 aa5.35□□□□□ -1.55
SRRM1-215ENST00000488317 C8orf49Q96NF6 230 aa5.35□□□□□ -1.55
SRRM1-215ENST00000488317 SENP7Q9BQF6 1050 aa5.35□□□□□ -1.55
SRRM1-215ENST00000488317 MECRQ9BV79 373 aa5.35□□□□□ -1.55
SRRM1-215ENST00000488317 KRTAP4-6Q9BYQ5 205 aa5.35□□□□□ -1.55
SRRM1-215ENST00000488317 TWSG1Q9GZX9 223 aa5.35□□□□□ -1.55
SRRM1-215ENST00000488317 UNC45AQ9H3U1 944 aa5.35□□□□□ -1.55
SRRM1-215ENST00000488317 TRIM36Q9NQ86 728 aa5.35□□□□□ -1.55
SRRM1-215ENST00000488317 SMC4Q9NTJ3 1288 aa5.35□□□□□ -1.55
SRRM1-215ENST00000488317 LIN7CQ9NUP9 197 aaKnown RBP5.35□□□□□ -1.55
SRRM1-215ENST00000488317 MAP3K20Q9NYL2 800 aaKnown RBP5.35□□□□□ -1.55
SRRM1-215ENST00000488317 ANKFY1Q9P2R3 1169 aa5.35□□□□□ -1.55
SRRM1-215ENST00000488317 BAG5Q9UL15 447 aa5.35□□□□□ -1.55
SRRM1-215ENST00000488317 DERAQ9Y315 318 aa5.35□□□□□ -1.55
SRRM1-215ENST00000488317 CES2O00748 559 aa5.34□□□□□ -1.55
SRRM1-215ENST00000488317 YY2O15391 372 aa5.34□□□□□ -1.55
SRRM1-215ENST00000488317 HOXC11O43248 304 aaPredicted RBP5.34□□□□□ -1.55
SRRM1-215ENST00000488317 CTIFO43310 598 aaKnown RBP5.34□□□□□ -1.55
SRRM1-215ENST00000488317 LPXNO60711 386 aa5.34□□□□□ -1.55
SRRM1-215ENST00000488317 CREB1P16220 341 aa5.34□□□□□ -1.55
SRRM1-215ENST00000488317 HOXA5P20719 270 aa5.34□□□□□ -1.55
SRRM1-215ENST00000488317 NR4A1P22736 598 aa5.34□□□□□ -1.55
SRRM1-215ENST00000488317 MAGEA10P43363 369 aaPredicted RBP5.34□□□□□ -1.55
SRRM1-215ENST00000488317 SEC24CP53992 1094 aa5.34□□□□□ -1.55
SRRM1-215ENST00000488317 SLC25A3Q00325 362 aa5.34□□□□□ -1.55
SRRM1-215ENST00000488317 MTAPQ13126 283 aa5.34□□□□□ -1.55
SRRM1-215ENST00000488317 SIM2Q14190 667 aaPredicted RBP5.34□□□□□ -1.55
SRRM1-215ENST00000488317 ANKRD1Q15327 319 aa5.34□□□□□ -1.55
SRRM1-215ENST00000488317 ZNF618Q5T7W0 954 aa5.34□□□□□ -1.55
SRRM1-215ENST00000488317 FAAH2Q6GMR7 532 aa5.34□□□□□ -1.55
SRRM1-215ENST00000488317 VWA1Q6PCB0 445 aa5.34□□□□□ -1.55
SRRM1-215ENST00000488317 SYNE3Q6ZMZ3 975 aa5.34□□□□□ -1.55
SRRM1-215ENST00000488317 DPY19L3Q6ZPD9 716 aa5.34□□□□□ -1.55
SRRM1-215ENST00000488317 LRRC71Q8N4P6 559 aa5.34□□□□□ -1.55
SRRM1-215ENST00000488317 IL17DQ8TAD2 202 aa5.34□□□□□ -1.55
SRRM1-215ENST00000488317 PLEKHG4BQ96PX9 1271 aa5.34□□□□□ -1.55
SRRM1-215ENST00000488317 TMX4Q9H1E5 349 aaPredicted RBP5.34□□□□□ -1.55
SRRM1-215ENST00000488317 UBN1Q9NPG3 1134 aa5.34□□□□□ -1.55
SRRM1-215ENST00000488317 G6PC2Q9NQR9 355 aa5.34□□□□□ -1.55
SRRM1-215ENST00000488317 KLC4Q9NSK0 619 aa5.34□□□□□ -1.55
SRRM1-215ENST00000488317 IRAK4Q9NWZ3 460 aa5.34□□□□□ -1.55
SRRM1-215ENST00000488317 EHD3Q9NZN3 535 aa5.34□□□□□ -1.55
SRRM1-215ENST00000488317 CEP72Q9P209 647 aa5.34□□□□□ -1.55
SRRM1-215ENST00000488317 DKK3Q9UBP4 350 aa5.34□□□□□ -1.55
SRRM1-215ENST00000488317 FBXO9Q9UK97 447 aaPredicted RBP5.34□□□□□ -1.55
SRRM1-215ENST00000488317 PEG3Q9GZU2 1588 aa5.33□□□□□ -1.56
SRRM1-215ENST00000488317 GOLGA3Q08378 1498 aa5.33□□□□□ -1.56
SRRM1-215ENST00000488317 ADGRA2Q96PE1 1338 aa5.33□□□□□ -1.56
SRRM1-215ENST00000488317 A0A0G2JLL6 359 aaPredicted RBP5.33□□□□□ -1.56
SRRM1-215ENST00000488317 AP4M1O00189 453 aa5.33□□□□□ -1.56
SRRM1-215ENST00000488317 PEX1O43933 1283 aa5.33□□□□□ -1.56
SRRM1-215ENST00000488317 CBFA2T3O75081 653 aa5.33□□□□□ -1.56
SRRM1-215ENST00000488317 PMPCBO75439 489 aa5.33□□□□□ -1.56
SRRM1-215ENST00000488317 ONECUT2O95948 504 aa5.33□□□□□ -1.56
SRRM1-215ENST00000488317 TFRCP02786 760 aaKnown RBP5.33□□□□□ -1.56
SRRM1-215ENST00000488317 IL6RP08887 468 aaPredicted RBP5.33□□□□□ -1.56
SRRM1-215ENST00000488317 ZNF37AP17032 561 aaPredicted RBP5.33□□□□□ -1.56
SRRM1-215ENST00000488317 ZFP36P26651 326 aaKnown RBP5.33□□□□□ -1.56
SRRM1-215ENST00000488317 GKP32189 559 aa5.33□□□□□ -1.56
SRRM1-215ENST00000488317 THBS4P35443 961 aa5.33□□□□□ -1.56
SRRM1-215ENST00000488317 TUBP50607 506 aa5.33□□□□□ -1.56
SRRM1-215ENST00000488317 TPTEP56180 551 aa5.33□□□□□ -1.56
SRRM1-215ENST00000488317 SUMO2P61956 95 aaKnown RBP5.33□□□□□ -1.56
SRRM1-215ENST00000488317 MPP1Q00013 466 aa5.33□□□□□ -1.56
SRRM1-215ENST00000488317 SMAD1Q15797 465 aaKnown RBP5.33□□□□□ -1.56
SRRM1-215ENST00000488317 TBRG1Q3YBR2 411 aa5.33□□□□□ -1.56
SRRM1-215ENST00000488317 GRHL2Q6ISB3 625 aa5.33□□□□□ -1.56
SRRM1-215ENST00000488317 ANKS1BQ7Z6G8 1248 aa5.33□□□□□ -1.56
SRRM1-215ENST00000488317 LNX2Q8N448 690 aa5.33□□□□□ -1.56
SRRM1-215ENST00000488317 OVCA2Q8WZ82 227 aa5.33□□□□□ -1.56
SRRM1-215ENST00000488317 HTRA1Q92743 480 aa5.33□□□□□ -1.56
SRRM1-215ENST00000488317 RSPRY1Q96DX4 576 aa5.33□□□□□ -1.56
SRRM1-215ENST00000488317 CDK5RAP1Q96SZ6 601 aaKnown RBP5.33□□□□□ -1.56
SRRM1-215ENST00000488317 AIFM2Q9BRQ8 373 aa5.33□□□□□ -1.56
SRRM1-215ENST00000488317 ALG8Q9BVK2 526 aa5.33□□□□□ -1.56
SRRM1-215ENST00000488317 SERHL2Q9H4I8 314 aa5.33□□□□□ -1.56
SRRM1-215ENST00000488317 NRDE2Q9H7Z3 1164 aa5.33□□□□□ -1.56
SRRM1-215ENST00000488317 SMPD4Q9NXE4 827 aa5.33□□□□□ -1.56
SRRM1-215ENST00000488317 FZD1Q9UP38 647 aa5.33□□□□□ -1.56
SRRM1-215ENST00000488317 TESMINQ9Y4I5 508 aa5.33□□□□□ -1.56
SRRM1-215ENST00000488317 FER1L4A9Z1Z3 1794 aa5.33□□□□□ -1.56
SRRM1-215ENST00000488317 TBC1D3DA0A087WVF3 549 aa5.32□□□□□ -1.56
SRRM1-215ENST00000488317 TBC1D3IA0A087WXS9 549 aa5.32□□□□□ -1.56
SRRM1-215ENST00000488317 TBC1D3EA0A087X179 549 aa5.32□□□□□ -1.56
SRRM1-215ENST00000488317 TBC1D3KA0A087X1G2 549 aa5.32□□□□□ -1.56
SRRM1-215ENST00000488317 CENPVL1A0A0U1RR11 272 aa5.32□□□□□ -1.56
SRRM1-215ENST00000488317 TBC1D3BA6NDS4 549 aa5.32□□□□□ -1.56
SRRM1-215ENST00000488317 TBC1D3FA6NER0 549 aaPredicted RBP5.32□□□□□ -1.56
SRRM1-215ENST00000488317 A8MVJ9 347 aa5.32□□□□□ -1.56
SRRM1-215ENST00000488317 TBC1D3LB9A6J9 549 aa5.32□□□□□ -1.56
SRRM1-215ENST00000488317 STX16-NPEPL1H3BU86 382 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms