RNA–Protein interactions for RNA: ENST00000488228.1

UBE4B-210, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-210ENST00000488228 DEPDC1BQ8WUY9 529 aa11.56□□□□□ -0.56
UBE4B-210ENST00000488228 C18orf8Q96DM3 657 aa11.56□□□□□ -0.56
UBE4B-210ENST00000488228 METTL5Q9NRN9 209 aaKnown RBP11.56□□□□□ -0.56
UBE4B-210ENST00000488228 GKN1Q9NS71 199 aa11.56□□□□□ -0.56
UBE4B-210ENST00000488228 ABCC13Q9NSE7 274 aa11.56□□□□□ -0.56
UBE4B-210ENST00000488228 MARCH2Q9P0N8 246 aa11.56□□□□□ -0.56
UBE4B-210ENST00000488228 SFMBT1Q9UHJ3 866 aa11.56□□□□□ -0.56
UBE4B-210ENST00000488228 DNMT3LQ9UJW3 386 aa11.56□□□□□ -0.56
UBE4B-210ENST00000488228 DUSP12Q9UNI6 340 aa11.56□□□□□ -0.56
UBE4B-210ENST00000488228 NAALADL1Q9UQQ1 740 aa11.56□□□□□ -0.56
UBE4B-210ENST00000488228 WNT6Q9Y6F9 365 aa11.56□□□□□ -0.56
UBE4B-210ENST00000488228 F5P12259 2224 aa11.56□□□□□ -0.56
UBE4B-210ENST00000488228 KMT2EQ8IZD2 1858 aa11.55□□□□□ -0.56
UBE4B-210ENST00000488228 AKR1B15C9JRZ8 316 aaPredicted RBP11.55□□□□□ -0.56
UBE4B-210ENST00000488228 DCXO43602 365 aa11.55□□□□□ -0.56
UBE4B-210ENST00000488228 HSF2BPO75031 334 aa11.55□□□□□ -0.56
UBE4B-210ENST00000488228 SRFP11831 508 aa11.55□□□□□ -0.56
UBE4B-210ENST00000488228 NCAM1P13591 858 aa11.55□□□□□ -0.56
UBE4B-210ENST00000488228 HNRNPH3P31942 346 aaKnown RBP11.55□□□□□ -0.56
UBE4B-210ENST00000488228 ATP5C1P36542 298 aaKnown RBP11.55□□□□□ -0.56
UBE4B-210ENST00000488228 GPC5P78333 572 aa11.55□□□□□ -0.56
UBE4B-210ENST00000488228 SLC6A3Q01959 620 aa11.55□□□□□ -0.56
UBE4B-210ENST00000488228 TNK2Q07912 1038 aa11.55□□□□□ -0.56
UBE4B-210ENST00000488228 PTP4A2Q12974 167 aa11.55□□□□□ -0.56
UBE4B-210ENST00000488228 ARID5BQ14865 1188 aa11.55□□□□□ -0.56
UBE4B-210ENST00000488228 IER5LQ5T953 404 aa11.55□□□□□ -0.56
UBE4B-210ENST00000488228 SYPL2Q5VXT5 272 aa11.55□□□□□ -0.56
UBE4B-210ENST00000488228 TRIM68Q6AZZ1 485 aa11.55□□□□□ -0.56
UBE4B-210ENST00000488228 MSANTD2Q6P1R3 559 aa11.55□□□□□ -0.56
UBE4B-210ENST00000488228 KLHDC10Q6PID8 442 aa11.55□□□□□ -0.56
UBE4B-210ENST00000488228 TADA2BQ86TJ2 420 aa11.55□□□□□ -0.56
UBE4B-210ENST00000488228 CNGA4Q8IV77 575 aa11.55□□□□□ -0.56
UBE4B-210ENST00000488228 MFSD6LQ8IWD5 586 aa11.55□□□□□ -0.56
UBE4B-210ENST00000488228 TC2NQ8N9U0 490 aa11.55□□□□□ -0.56
UBE4B-210ENST00000488228 SPC24Q8NBT2 197 aa11.55□□□□□ -0.56
UBE4B-210ENST00000488228 OR8K1Q8NGG5 319 aa11.55□□□□□ -0.56
UBE4B-210ENST00000488228 ADAM32Q8TC27 787 aa11.55□□□□□ -0.56
UBE4B-210ENST00000488228 NXPE3Q969Y0 559 aa11.55□□□□□ -0.56
UBE4B-210ENST00000488228 E2F7Q96AV8 911 aa11.55□□□□□ -0.56
UBE4B-210ENST00000488228 SLC2A13Q96QE2 648 aa11.55□□□□□ -0.56
UBE4B-210ENST00000488228 CDK5RAP1Q96SZ6 601 aaKnown RBP11.55□□□□□ -0.56
UBE4B-210ENST00000488228 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.55□□□□□ -0.56
UBE4B-210ENST00000488228 TRMT61BQ9BVS5 477 aaKnown RBP11.55□□□□□ -0.56
UBE4B-210ENST00000488228 KLF16Q9BXK1 252 aaPredicted RBP11.55□□□□□ -0.56
UBE4B-210ENST00000488228 BRD9Q9H8M2 597 aa11.55□□□□□ -0.56
UBE4B-210ENST00000488228 POPDC2Q9HBU9 364 aa11.55□□□□□ -0.56
UBE4B-210ENST00000488228 OBP2AQ9NY56 170 aa11.55□□□□□ -0.56
UBE4B-210ENST00000488228 ADAM22Q9P0K1 906 aa11.55□□□□□ -0.56
UBE4B-210ENST00000488228 ZDBF2Q9HCK1 2354 aa11.54□□□□□ -0.56
UBE4B-210ENST00000488228 A0A087X0T9 212 aa11.54□□□□□ -0.56
UBE4B-210ENST00000488228 SLC12A8A0AV02 714 aa11.54□□□□□ -0.56
UBE4B-210ENST00000488228 TNFRSF10AO00220 468 aa11.54□□□□□ -0.56
UBE4B-210ENST00000488228 ARNTLO00327 626 aa11.54□□□□□ -0.56
UBE4B-210ENST00000488228 CAPN9O14815 690 aa11.54□□□□□ -0.56
UBE4B-210ENST00000488228 STC2O76061 302 aa11.54□□□□□ -0.56
UBE4B-210ENST00000488228 FAM228BP0C875 321 aa11.54□□□□□ -0.56
UBE4B-210ENST00000488228 ARSAP15289 507 aa11.54□□□□□ -0.56
UBE4B-210ENST00000488228 TCF3P15923 654 aa11.54□□□□□ -0.56
UBE4B-210ENST00000488228 CDC25BP30305 580 aa11.54□□□□□ -0.56
UBE4B-210ENST00000488228 FLT3P36888 993 aa11.54□□□□□ -0.56
UBE4B-210ENST00000488228 EIF4A3P38919 411 aaKnown RBP11.54□□□□□ -0.56
UBE4B-210ENST00000488228 SNX16P57768 344 aa11.54□□□□□ -0.56
UBE4B-210ENST00000488228 RNASE9P60153 205 aaKnown RBP11.54□□□□□ -0.56
UBE4B-210ENST00000488228 YWHAZP63104 245 aaKnown RBP11.54□□□□□ -0.56
UBE4B-210ENST00000488228 OTUD1Q5VV17 481 aaPredicted RBP11.54□□□□□ -0.56
UBE4B-210ENST00000488228 TRNP1Q6NT89 227 aa11.54□□□□□ -0.56
UBE4B-210ENST00000488228 CC2D1AQ6P1N0 951 aaPredicted RBP11.54□□□□□ -0.56
UBE4B-210ENST00000488228 DDX42Q86XP3 938 aaKnown RBP eCLIP11.54□□□□□ -0.56
UBE4B-210ENST00000488228 ZDHHC17Q8IUH5 632 aa11.54□□□□□ -0.56
UBE4B-210ENST00000488228 BBS7Q8IWZ6 715 aa11.54□□□□□ -0.56
UBE4B-210ENST00000488228 DRC7Q8IY82 874 aa11.54□□□□□ -0.56
UBE4B-210ENST00000488228 DEFB106AQ8N104 65 aa11.54□□□□□ -0.56
UBE4B-210ENST00000488228 ZNF276Q8N554 614 aa11.54□□□□□ -0.56
UBE4B-210ENST00000488228 EMC1Q8N766 993 aa11.54□□□□□ -0.56
UBE4B-210ENST00000488228 TTC8Q8TAM2 541 aa11.54□□□□□ -0.56
UBE4B-210ENST00000488228 FAM204AQ9H8W3 233 aa11.54□□□□□ -0.56
UBE4B-210ENST00000488228 GRPEL1Q9HAV7 217 aa11.54□□□□□ -0.56
UBE4B-210ENST00000488228 OLA1Q9NTK5 396 aaKnown RBP11.54□□□□□ -0.56
UBE4B-210ENST00000488228 ASNSD1Q9NWL6 643 aa11.54□□□□□ -0.56
UBE4B-210ENST00000488228 ADAMTS1Q9UHI8 967 aa11.54□□□□□ -0.56
UBE4B-210ENST00000488228 STRIP2Q9ULQ0 834 aa11.54□□□□□ -0.56
UBE4B-210ENST00000488228 CA14Q9ULX7 337 aa11.54□□□□□ -0.56
UBE4B-210ENST00000488228 SH3BP1Q9Y3L3 701 aa11.54□□□□□ -0.56
UBE4B-210ENST00000488228 BZW2Q9Y6E2 419 aaKnown RBP11.54□□□□□ -0.56
UBE4B-210ENST00000488228 SYNJ2BP-COX16A0A087WUM0 186 aa11.53□□□□□ -0.56
UBE4B-210ENST00000488228 GOLGA6L3A6NEY3 463 aa11.53□□□□□ -0.56
UBE4B-210ENST00000488228 ZNF263O14978 683 aa11.53□□□□□ -0.56
UBE4B-210ENST00000488228 GREM1O60565 184 aa11.53□□□□□ -0.56
UBE4B-210ENST00000488228 CALB1P05937 261 aa11.53□□□□□ -0.56
UBE4B-210ENST00000488228 GLI1P08151 1106 aa11.53□□□□□ -0.56
UBE4B-210ENST00000488228 TFE3P19532 575 aaPredicted RBP11.53□□□□□ -0.56
UBE4B-210ENST00000488228 RRM1P23921 792 aa11.53□□□□□ -0.56
UBE4B-210ENST00000488228 SOX9P48436 509 aa11.53□□□□□ -0.56
UBE4B-210ENST00000488228 IFNAR2P48551 515 aa11.53□□□□□ -0.56
UBE4B-210ENST00000488228 ZXDAP98168 799 aa11.53□□□□□ -0.56
UBE4B-210ENST00000488228 GFPT1Q06210 699 aaPredicted RBP11.53□□□□□ -0.56
UBE4B-210ENST00000488228 C1QBPQ07021 282 aaKnown RBP11.53□□□□□ -0.56
UBE4B-210ENST00000488228 ARHGAP29Q52LW3 1261 aa11.53□□□□□ -0.56
UBE4B-210ENST00000488228 DCAF6Q58WW2 860 aa11.53□□□□□ -0.56
UBE4B-210ENST00000488228 EFHC1Q5JVL4 640 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms