RNA–Protein interactions for RNA: ENST00000487294.1

R3HDM1-218, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 587 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-218ENST00000487294 PFKPQ01813 784 aa5.64□□□□□ -1.51
R3HDM1-218ENST00000487294 LAMTOR4Q0VGL1 99 aa5.64□□□□□ -1.51
R3HDM1-218ENST00000487294 MXD4Q14582 209 aaPredicted RBP5.64□□□□□ -1.51
R3HDM1-218ENST00000487294 NPY5RQ15761 445 aa5.64□□□□□ -1.51
R3HDM1-218ENST00000487294 USP41Q3LFD5 358 aa5.64□□□□□ -1.51
R3HDM1-218ENST00000487294 PPP4R3AQ6IN85 833 aa5.64□□□□□ -1.51
R3HDM1-218ENST00000487294 MTSS1LQ765P7 747 aa5.64□□□□□ -1.51
R3HDM1-218ENST00000487294 SPATC1Q76KD6 591 aa5.64□□□□□ -1.51
R3HDM1-218ENST00000487294 TAS1R1Q7RTX1 841 aa5.64□□□□□ -1.51
R3HDM1-218ENST00000487294 FERMT3Q86UX7 667 aa5.64□□□□□ -1.51
R3HDM1-218ENST00000487294 KIAA2013Q8IYS2 634 aa5.64□□□□□ -1.51
R3HDM1-218ENST00000487294 KCNG4Q8TDN1 519 aa5.64□□□□□ -1.51
R3HDM1-218ENST00000487294 TBCKQ8TEA7 893 aa5.64□□□□□ -1.51
R3HDM1-218ENST00000487294 TCP11Q8WWU5 503 aa5.64□□□□□ -1.51
R3HDM1-218ENST00000487294 PRPF31Q8WWY3 499 aaKnown RBP5.64□□□□□ -1.51
R3HDM1-218ENST00000487294 TRMT2BQ96GJ1 504 aaKnown RBP5.64□□□□□ -1.51
R3HDM1-218ENST00000487294 NLRP4Q96MN2 994 aa5.64□□□□□ -1.51
R3HDM1-218ENST00000487294 TCEANC2Q96MN5 208 aa5.64□□□□□ -1.51
R3HDM1-218ENST00000487294 AARSD1Q9BTE6 412 aaKnown RBP5.64□□□□□ -1.51
R3HDM1-218ENST00000487294 COLEC11Q9BWP8 271 aa5.64□□□□□ -1.51
R3HDM1-218ENST00000487294 EPC1Q9H2F5 836 aa5.64□□□□□ -1.51
R3HDM1-218ENST00000487294 KCNMB3Q9NPA1 279 aa5.64□□□□□ -1.51
R3HDM1-218ENST00000487294 FBXW11Q9UKB1 542 aa5.64□□□□□ -1.51
R3HDM1-218ENST00000487294 CDH7Q9ULB5 785 aa5.64□□□□□ -1.51
R3HDM1-218ENST00000487294 CA14Q9ULX7 337 aa5.64□□□□□ -1.51
R3HDM1-218ENST00000487294 IPPQ9Y573 584 aa5.64□□□□□ -1.51
R3HDM1-218ENST00000487294 NUMBLQ9Y6R0 609 aa5.64□□□□□ -1.51
R3HDM1-218ENST00000487294 USP24Q9UPU5 2620 aa5.64□□□□□ -1.51
R3HDM1-218ENST00000487294 ZFHX4Q86UP3 3567 aa5.64□□□□□ -1.51
R3HDM1-218ENST00000487294 PATJQ8NI35 1801 aa5.64□□□□□ -1.51
R3HDM1-218ENST00000487294 MAP1BP46821 2468 aaKnown RBP5.64□□□□□ -1.51
R3HDM1-218ENST00000487294 F5P12259 2224 aa5.63□□□□□ -1.51
R3HDM1-218ENST00000487294 A0A1B0GUA9 196 aa5.63□□□□□ -1.51
R3HDM1-218ENST00000487294 PDPK1O15530 556 aa5.63□□□□□ -1.51
R3HDM1-218ENST00000487294 PRODHO43272 600 aa5.63□□□□□ -1.51
R3HDM1-218ENST00000487294 CHMP2AO43633 222 aa5.63□□□□□ -1.51
R3HDM1-218ENST00000487294 TSPAN1O60635 241 aa5.63□□□□□ -1.51
R3HDM1-218ENST00000487294 LRP3O75074 770 aa5.63□□□□□ -1.51
R3HDM1-218ENST00000487294 LYPLA2O95372 231 aa5.63□□□□□ -1.51
R3HDM1-218ENST00000487294 TDP2O95551 362 aa5.63□□□□□ -1.51
R3HDM1-218ENST00000487294 GCFC2P16383 781 aaKnown RBP5.63□□□□□ -1.51
R3HDM1-218ENST00000487294 NPEPPSP55786 919 aa5.63□□□□□ -1.51
R3HDM1-218ENST00000487294 GPC5P78333 572 aa5.63□□□□□ -1.51
R3HDM1-218ENST00000487294 AKAP17AQ02040 695 aaKnown RBP5.63□□□□□ -1.51
R3HDM1-218ENST00000487294 GRIK3Q13003 919 aa5.63□□□□□ -1.51
R3HDM1-218ENST00000487294 LSAMPQ13449 338 aa5.63□□□□□ -1.51
R3HDM1-218ENST00000487294 LONRF3Q496Y0 759 aa5.63□□□□□ -1.51
R3HDM1-218ENST00000487294 MROH9Q5TGP6 573 aa5.63□□□□□ -1.51
R3HDM1-218ENST00000487294 YOD1Q5VVQ6 348 aaPredicted RBP5.63□□□□□ -1.51
R3HDM1-218ENST00000487294 ERICH6BQ5W0A0 696 aa5.63□□□□□ -1.51
R3HDM1-218ENST00000487294 FUT10Q6P4F1 479 aa5.63□□□□□ -1.51
R3HDM1-218ENST00000487294 NOTUMQ6P988 496 aa5.63□□□□□ -1.51
R3HDM1-218ENST00000487294 DCP2Q8IU60 420 aaKnown RBP5.63□□□□□ -1.51
R3HDM1-218ENST00000487294 HACE1Q8IYU2 909 aa5.63□□□□□ -1.51
R3HDM1-218ENST00000487294 DCLK2Q8N568 766 aa5.63□□□□□ -1.51
R3HDM1-218ENST00000487294 RNF149Q8NC42 400 aa5.63□□□□□ -1.51
R3HDM1-218ENST00000487294 RIN2Q8WYP3 895 aaPredicted RBP5.63□□□□□ -1.51
R3HDM1-218ENST00000487294 FGF13Q92913 245 aa5.63□□□□□ -1.51
R3HDM1-218ENST00000487294 FGF14Q92915 247 aa5.63□□□□□ -1.51
R3HDM1-218ENST00000487294 PHKBQ93100 1093 aa5.63□□□□□ -1.51
R3HDM1-218ENST00000487294 GJA10Q969M2 543 aa5.63□□□□□ -1.51
R3HDM1-218ENST00000487294 GAD1Q99259 594 aa5.63□□□□□ -1.51
R3HDM1-218ENST00000487294 SH2D3AQ9BRG2 576 aa5.63□□□□□ -1.51
R3HDM1-218ENST00000487294 CCDC113Q9H0I3 377 aa5.63□□□□□ -1.51
R3HDM1-218ENST00000487294 CSRNP2Q9H175 543 aa5.63□□□□□ -1.51
R3HDM1-218ENST00000487294 PRMT8Q9NR22 394 aaPredicted RBP5.63□□□□□ -1.51
R3HDM1-218ENST00000487294 ZSCAN32Q9NX65 697 aa5.63□□□□□ -1.51
R3HDM1-218ENST00000487294 MIOSQ9NXC5 875 aa5.63□□□□□ -1.51
R3HDM1-218ENST00000487294 VPS54Q9P1Q0 977 aa5.63□□□□□ -1.51
R3HDM1-218ENST00000487294 WRAP73Q9P2S5 460 aaPredicted RBP5.63□□□□□ -1.51
R3HDM1-218ENST00000487294 ADAM28Q9UKQ2 775 aa5.63□□□□□ -1.51
R3HDM1-218ENST00000487294 PRG3Q9Y2Y8 225 aaPredicted RBP5.63□□□□□ -1.51
R3HDM1-218ENST00000487294 MIA3Q5JRA6 1907 aa5.63□□□□□ -1.51
R3HDM1-218ENST00000487294 TDRD15B5MCY1 1934 aaKnown RBP5.62□□□□□ -1.51
R3HDM1-218ENST00000487294 MYH15Q9Y2K3 1946 aa5.62□□□□□ -1.51
R3HDM1-218ENST00000487294 DOCK6Q96HP0 2047 aa5.62□□□□□ -1.51
R3HDM1-218ENST00000487294 SHISA7A6NL88 538 aa5.62□□□□□ -1.51
R3HDM1-218ENST00000487294 F8W810 466 aa5.62□□□□□ -1.51
R3HDM1-218ENST00000487294 H7BY64 318 aa5.62□□□□□ -1.51
R3HDM1-218ENST00000487294 NCAM2O15394 837 aa5.62□□□□□ -1.51
R3HDM1-218ENST00000487294 EPB41L2O43491 1005 aaKnown RBP5.62□□□□□ -1.51
R3HDM1-218ENST00000487294 LAMTOR5O43504 91 aa5.62□□□□□ -1.51
R3HDM1-218ENST00000487294 TBC1D4O60343 1298 aa5.62□□□□□ -1.51
R3HDM1-218ENST00000487294 ECI2O75521 394 aa5.62□□□□□ -1.51
R3HDM1-218ENST00000487294 ERLIN2O94905 339 aa5.62□□□□□ -1.51
R3HDM1-218ENST00000487294 DEXIO95424 95 aa5.62□□□□□ -1.51
R3HDM1-218ENST00000487294 SRGAP2CP0DJJ0 459 aa5.62□□□□□ -1.51
R3HDM1-218ENST00000487294 PABPC1P11940 636 aaKnown RBP5.62□□□□□ -1.51
R3HDM1-218ENST00000487294 TDGF1P13385 188 aa5.62□□□□□ -1.51
R3HDM1-218ENST00000487294 ARF4P18085 180 aaPredicted RBP5.62□□□□□ -1.51
R3HDM1-218ENST00000487294 PDIA3P30101 505 aaKnown RBP5.62□□□□□ -1.51
R3HDM1-218ENST00000487294 YWHABP31946 246 aaKnown RBP5.62□□□□□ -1.51
R3HDM1-218ENST00000487294 HSPA4P34932 840 aa5.62□□□□□ -1.51
R3HDM1-218ENST00000487294 ARL2P36404 184 aa5.62□□□□□ -1.51
R3HDM1-218ENST00000487294 MLH1P40692 756 aa5.62□□□□□ -1.51
R3HDM1-218ENST00000487294 OR1G1P47890 313 aa5.62□□□□□ -1.51
R3HDM1-218ENST00000487294 SLC6A11P48066 632 aa5.62□□□□□ -1.51
R3HDM1-218ENST00000487294 SCNN1GP51170 649 aa5.62□□□□□ -1.51
R3HDM1-218ENST00000487294 ATXN1P54253 815 aaKnown RBP5.62□□□□□ -1.51
R3HDM1-218ENST00000487294 MLLT6P55198 1093 aaPredicted RBP5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms