RNA–Protein interactions for RNA: ENST00000487029.1

SNRNP27-204, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 3

Gene SNRNP27, Length 604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-204ENST00000487029 SLC9A4Q6AI14 798 aa4.15□□□□□ -1.75
SNRNP27-204ENST00000487029 CACNA2D3Q8IZS8 1091 aa4.15□□□□□ -1.75
SNRNP27-204ENST00000487029 ATG16L2Q8NAA4 619 aa4.15□□□□□ -1.75
SNRNP27-204ENST00000487029 MYRIPQ8NFW9 859 aa4.15□□□□□ -1.75
SNRNP27-204ENST00000487029 FAM71BQ8TC56 605 aa4.15□□□□□ -1.75
SNRNP27-204ENST00000487029 PPM1EQ8WY54 764 aa4.15□□□□□ -1.75
SNRNP27-204ENST00000487029 FAM227BQ96M60 508 aa4.15□□□□□ -1.75
SNRNP27-204ENST00000487029 SCLT1Q96NL6 688 aa4.15□□□□□ -1.75
SNRNP27-204ENST00000487029 TPSD1Q9BZJ3 242 aa4.15□□□□□ -1.75
SNRNP27-204ENST00000487029 AMBRA1Q9C0C7 1298 aa4.15□□□□□ -1.75
SNRNP27-204ENST00000487029 ZCWPW1Q9H0M4 648 aa4.15□□□□□ -1.75
SNRNP27-204ENST00000487029 MYLK2Q9H1R3 596 aa4.15□□□□□ -1.75
SNRNP27-204ENST00000487029 SLC25A32Q9H2D1 315 aa4.15□□□□□ -1.75
SNRNP27-204ENST00000487029 GBA2Q9HCG7 927 aaPredicted RBP4.15□□□□□ -1.75
SNRNP27-204ENST00000487029 TMOD4Q9NZQ9 345 aa4.15□□□□□ -1.75
SNRNP27-204ENST00000487029 IGSF9Q9P2J2 1179 aa4.15□□□□□ -1.75
SNRNP27-204ENST00000487029 SERTAD3Q9UJW9 196 aa4.15□□□□□ -1.75
SNRNP27-204ENST00000487029 FNDC1Q4ZHG4 1894 aaPredicted RBP4.15□□□□□ -1.75
SNRNP27-204ENST00000487029 AQP12BA6NM10 295 aa4.14□□□□□ -1.75
SNRNP27-204ENST00000487029 ACKR2O00590 384 aa4.14□□□□□ -1.75
SNRNP27-204ENST00000487029 PIP5K1BO14986 540 aa4.14□□□□□ -1.75
SNRNP27-204ENST00000487029 TLR5O60602 858 aa4.14□□□□□ -1.75
SNRNP27-204ENST00000487029 TOP3BO95985 862 aaKnown RBP4.14□□□□□ -1.75
SNRNP27-204ENST00000487029 ITGA5P08648 1049 aa4.14□□□□□ -1.75
SNRNP27-204ENST00000487029 NHLRC4P0CG21 123 aaPredicted RBP4.14□□□□□ -1.75
SNRNP27-204ENST00000487029 PPP3CBP16298 524 aa4.14□□□□□ -1.75
SNRNP27-204ENST00000487029 MST1P26927 711 aa4.14□□□□□ -1.75
SNRNP27-204ENST00000487029 ADORA2AP29274 412 aa4.14□□□□□ -1.75
SNRNP27-204ENST00000487029 TKTP29401 623 aaKnown RBP4.14□□□□□ -1.75
SNRNP27-204ENST00000487029 PRKAR1BP31321 381 aa4.14□□□□□ -1.75
SNRNP27-204ENST00000487029 SLC5A2P31639 672 aa4.14□□□□□ -1.75
SNRNP27-204ENST00000487029 SERPINF1P36955 418 aa4.14□□□□□ -1.75
SNRNP27-204ENST00000487029 BCAT1P54687 386 aa4.14□□□□□ -1.75
SNRNP27-204ENST00000487029 NSUN2Q08J23 767 aaKnown RBP eCLIP4.14□□□□□ -1.75
SNRNP27-204ENST00000487029 FOXO1Q12778 655 aa4.14□□□□□ -1.75
SNRNP27-204ENST00000487029 ARHGAP15Q53QZ3 475 aa4.14□□□□□ -1.75
SNRNP27-204ENST00000487029 HSP90AB4PQ58FF6 505 aa4.14□□□□□ -1.75
SNRNP27-204ENST00000487029 TMTC4Q5T4D3 741 aa4.14□□□□□ -1.75
SNRNP27-204ENST00000487029 CPXCR1Q8N123 301 aa4.14□□□□□ -1.75
SNRNP27-204ENST00000487029 B3GALNT2Q8NCR0 500 aa4.14□□□□□ -1.75
SNRNP27-204ENST00000487029 TMEM171Q8WVE6 324 aa4.14□□□□□ -1.75
SNRNP27-204ENST00000487029 OSCP1Q8WVF1 389 aa4.14□□□□□ -1.75
SNRNP27-204ENST00000487029 TRAPPC12Q8WVT3 735 aa4.14□□□□□ -1.75
SNRNP27-204ENST00000487029 ATG4AQ8WYN0 398 aa4.14□□□□□ -1.75
SNRNP27-204ENST00000487029 ZDHHC12Q96GR4 267 aa4.14□□□□□ -1.75
SNRNP27-204ENST00000487029 ISCA1Q9BUE6 129 aa4.14□□□□□ -1.75
SNRNP27-204ENST00000487029 ACTRT3Q9BYD9 372 aa4.14□□□□□ -1.75
SNRNP27-204ENST00000487029 MAGEH1Q9H213 219 aa4.14□□□□□ -1.75
SNRNP27-204ENST00000487029 DACT1Q9NYF0 836 aa4.14□□□□□ -1.75
SNRNP27-204ENST00000487029 LRFN1Q9P244 771 aa4.14□□□□□ -1.75
SNRNP27-204ENST00000487029 DNAJB11Q9UBS4 358 aa4.14□□□□□ -1.75
SNRNP27-204ENST00000487029 CA14Q9ULX7 337 aa4.14□□□□□ -1.75
SNRNP27-204ENST00000487029 PPEF2O14830 753 aa4.13□□□□□ -1.75
SNRNP27-204ENST00000487029 PPM1DO15297 605 aa4.13□□□□□ -1.75
SNRNP27-204ENST00000487029 CCNT2O60583 730 aaKnown RBP4.13□□□□□ -1.75
SNRNP27-204ENST00000487029 GLP2RO95838 553 aa4.13□□□□□ -1.75
SNRNP27-204ENST00000487029 HGFP14210 728 aa4.13□□□□□ -1.75
SNRNP27-204ENST00000487029 PECAM1P16284 738 aaPredicted RBP4.13□□□□□ -1.75
SNRNP27-204ENST00000487029 NPPBP16860 134 aa4.13□□□□□ -1.75
SNRNP27-204ENST00000487029 EPHA3P29320 983 aa4.13□□□□□ -1.75
SNRNP27-204ENST00000487029 UQCRC1P31930 480 aa4.13□□□□□ -1.75
SNRNP27-204ENST00000487029 PPM1FP49593 454 aaPredicted RBP4.13□□□□□ -1.75
SNRNP27-204ENST00000487029 PGDP52209 483 aa4.13□□□□□ -1.75
SNRNP27-204ENST00000487029 NXPH1P58417 271 aa4.13□□□□□ -1.75
SNRNP27-204ENST00000487029 ITIH3Q06033 890 aa4.13□□□□□ -1.75
SNRNP27-204ENST00000487029 GPS1Q13098 491 aa4.13□□□□□ -1.75
SNRNP27-204ENST00000487029 DEPDC1Q5TB30 811 aa4.13□□□□□ -1.75
SNRNP27-204ENST00000487029 SLC2A7Q6PXP3 512 aa4.13□□□□□ -1.75
SNRNP27-204ENST00000487029 LDHAL6AQ6ZMR3 332 aa4.13□□□□□ -1.75
SNRNP27-204ENST00000487029 DTX2Q86UW9 622 aa4.13□□□□□ -1.75
SNRNP27-204ENST00000487029 GATAD2AQ86YP4 633 aa4.13□□□□□ -1.75
SNRNP27-204ENST00000487029 SMAP1Q8IYB5 467 aaPredicted RBP4.13□□□□□ -1.75
SNRNP27-204ENST00000487029 ABRAQ8N0Z2 381 aa4.13□□□□□ -1.75
SNRNP27-204ENST00000487029 DENND1AQ8TEH3 1009 aa4.13□□□□□ -1.75
SNRNP27-204ENST00000487029 STYXQ8WUJ0 223 aa4.13□□□□□ -1.75
SNRNP27-204ENST00000487029 ATRIPQ8WXE1 791 aa4.13□□□□□ -1.75
SNRNP27-204ENST00000487029 PGBD1Q96JS3 809 aa4.13□□□□□ -1.75
SNRNP27-204ENST00000487029 PRPF18Q99633 342 aaKnown RBP4.13□□□□□ -1.75
SNRNP27-204ENST00000487029 PAGR1Q9BTK6 254 aa4.13□□□□□ -1.75
SNRNP27-204ENST00000487029 TMEM120AQ9BXJ8 343 aa4.13□□□□□ -1.75
SNRNP27-204ENST00000487029 NRIP3Q9NQ35 241 aa4.13□□□□□ -1.75
SNRNP27-204ENST00000487029 ELOVL5Q9NYP7 299 aa4.13□□□□□ -1.75
SNRNP27-204ENST00000487029 LUZP4Q9P127 313 aa4.13□□□□□ -1.75
SNRNP27-204ENST00000487029 GRHPRQ9UBQ7 328 aa4.13□□□□□ -1.75
SNRNP27-204ENST00000487029 VPS51Q9UID3 782 aa4.13□□□□□ -1.75
SNRNP27-204ENST00000487029 DTNAQ9Y4J8 743 aa4.13□□□□□ -1.75
SNRNP27-204ENST00000487029 SNX14Q9Y5W7 946 aa4.13□□□□□ -1.75
SNRNP27-204ENST00000487029 DGKBQ9Y6T7 804 aa4.13□□□□□ -1.75
SNRNP27-204ENST00000487029 CCDC187A0A096LP49 1063 aa4.12□□□□□ -1.75
SNRNP27-204ENST00000487029 OR2W5A6NFC9 320 aa4.12□□□□□ -1.75
SNRNP27-204ENST00000487029 H3BNC9 293 aa4.12□□□□□ -1.75
SNRNP27-204ENST00000487029 ASNA1O43681 348 aa4.12□□□□□ -1.75
SNRNP27-204ENST00000487029 TNFRSF6BO95407 300 aa4.12□□□□□ -1.75
SNRNP27-204ENST00000487029 HNRNPCP07910 306 aaKnown RBP eCLIP4.12□□□□□ -1.75
SNRNP27-204ENST00000487029 ARP10275 920 aa4.12□□□□□ -1.75
SNRNP27-204ENST00000487029 VEGFAP15692 232 aaPredicted RBP4.12□□□□□ -1.75
SNRNP27-204ENST00000487029 GATMP50440 423 aa4.12□□□□□ -1.75
SNRNP27-204ENST00000487029 TIAL1Q01085 375 aaKnown RBP eCLIP4.12□□□□□ -1.75
SNRNP27-204ENST00000487029 ATP1A4Q13733 1029 aa4.12□□□□□ -1.75
SNRNP27-204ENST00000487029 TRIM71Q2Q1W2 868 aaKnown RBP4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms