RNA–Protein interactions for RNA: ENST00000486991.1

NR1H3-223, Transcript of nuclear receptor subfamily 1 group H member 3, human

TSL 4

Gene NR1H3, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1H3-223	ENST00000486991	ARHGAP8	P85298	464 aa		13.76	□□□□□ -0.21
NR1H3-223	ENST00000486991	CCDC6	Q16204	474 aa		13.76	□□□□□ -0.21
NR1H3-223	ENST00000486991	HGSNAT	Q68CP4	663 aa		13.76	□□□□□ -0.21
NR1H3-223	ENST00000486991	ARHGAP17	Q68EM7	881 aa		13.76	□□□□□ -0.21
NR1H3-223	ENST00000486991	LAIR1	Q6GTX8	287 aa		13.76	□□□□□ -0.21
NR1H3-223	ENST00000486991	PAQR9	Q6ZVX9	377 aa		13.76	□□□□□ -0.21
NR1H3-223	ENST00000486991	SPEM1	Q8N4L4	309 aa		13.76	□□□□□ -0.21
NR1H3-223	ENST00000486991	SLC2A14	Q8TDB8	520 aa		13.76	□□□□□ -0.21
NR1H3-223	ENST00000486991	ZNF606	Q8WXB4	792 aa		13.76	□□□□□ -0.21
NR1H3-223	ENST00000486991	CEP295NL	Q96MC4	621 aa		13.76	□□□□□ -0.21
NR1H3-223	ENST00000486991	PPP1R9B	Q96SB3	815 aa		13.76	□□□□□ -0.21
NR1H3-223	ENST00000486991	CHP1	Q99653	195 aa		13.76	□□□□□ -0.21
NR1H3-223	ENST00000486991	AGPAT1	Q99943	283 aa		13.76	□□□□□ -0.21
NR1H3-223	ENST00000486991	ZSWIM1	Q9BR11	485 aa		13.76	□□□□□ -0.21
NR1H3-223	ENST00000486991	B3GNT5	Q9BYG0	378 aa		13.76	□□□□□ -0.21
NR1H3-223	ENST00000486991	ZNF518B	Q9C0D4	1074 aa		13.76	□□□□□ -0.21
NR1H3-223	ENST00000486991	THG1L	Q9NWX6	298 aa	Known RBP	13.76	□□□□□ -0.21
NR1H3-223	ENST00000486991	EHD2	Q9NZN4	543 aa		13.76	□□□□□ -0.21
NR1H3-223	ENST00000486991	HESX1	Q9UBX0	185 aa		13.76	□□□□□ -0.21
NR1H3-223	ENST00000486991	NOCT	Q9UK39	431 aa	Known RBP	13.76	□□□□□ -0.21
NR1H3-223	ENST00000486991	BZW2	Q9Y6E2	419 aa	Known RBP	13.76	□□□□□ -0.21
NR1H3-223	ENST00000486991	ATP8B3	O60423	1300 aa		13.75	□□□□□ -0.21
NR1H3-223	ENST00000486991	EPG5	Q9HCE0	2579 aa		13.75	□□□□□ -0.21
NR1H3-223	ENST00000486991		M0QYV0	167 aa		13.75	□□□□□ -0.21
NR1H3-223	ENST00000486991	PLEK	P08567	350 aa	Predicted RBP	13.75	□□□□□ -0.21
NR1H3-223	ENST00000486991	CHRNB2	P17787	502 aa		13.75	□□□□□ -0.21
NR1H3-223	ENST00000486991	TNFAIP3	P21580	790 aa		13.75	□□□□□ -0.21
NR1H3-223	ENST00000486991	EIF4A3	P38919	411 aa	Known RBP	13.75	□□□□□ -0.21
NR1H3-223	ENST00000486991	CDR2	Q01850	454 aa		13.75	□□□□□ -0.21
NR1H3-223	ENST00000486991	PPP2R5D	Q14738	602 aa		13.75	□□□□□ -0.21
NR1H3-223	ENST00000486991	STIL	Q15468	1287 aa		13.75	□□□□□ -0.21
NR1H3-223	ENST00000486991	CNGA2	Q16280	664 aa		13.75	□□□□□ -0.21
NR1H3-223	ENST00000486991	MEA1	Q16626	185 aa		13.75	□□□□□ -0.21
NR1H3-223	ENST00000486991	VSTM1	Q6UX27	236 aa		13.75	□□□□□ -0.21
NR1H3-223	ENST00000486991	ZNF571	Q7Z3V5	609 aa	Predicted RBP	13.75	□□□□□ -0.21
NR1H3-223	ENST00000486991	FAM35A	Q86V20	835 aa		13.75	□□□□□ -0.21
NR1H3-223	ENST00000486991	ZNF677	Q86XU0	584 aa		13.75	□□□□□ -0.21
NR1H3-223	ENST00000486991	PASD1	Q8IV76	773 aa		13.75	□□□□□ -0.21
NR1H3-223	ENST00000486991	CMTM8	Q8IZV2	173 aa		13.75	□□□□□ -0.21
NR1H3-223	ENST00000486991	FUK	Q8N0W3	1084 aa		13.75	□□□□□ -0.21
NR1H3-223	ENST00000486991	DDX1	Q92499	740 aa	Known RBP	13.75	□□□□□ -0.21
NR1H3-223	ENST00000486991	MRPS31	Q92665	395 aa	Known RBP	13.75	□□□□□ -0.21
NR1H3-223	ENST00000486991	SPATA17	Q96L03	361 aa		13.75	□□□□□ -0.21
NR1H3-223	ENST00000486991	SLC22A12	Q96S37	553 aa		13.75	□□□□□ -0.21
NR1H3-223	ENST00000486991	HNRNPAB	Q99729	332 aa	Known RBP	13.75	□□□□□ -0.21
NR1H3-223	ENST00000486991	BAG1	Q99933	345 aa	Predicted RBP	13.75	□□□□□ -0.21
NR1H3-223	ENST00000486991	HNRNPUL1	Q9BUJ2	856 aa	Known RBP eCLIP	13.75	□□□□□ -0.21
NR1H3-223	ENST00000486991	TTLL2	Q9BWV7	592 aa		13.75	□□□□□ -0.21
NR1H3-223	ENST00000486991	DEF6	Q9H4E7	631 aa		13.75	□□□□□ -0.21
NR1H3-223	ENST00000486991	C8orf33	Q9H7E9	229 aa	Predicted RBP	13.75	□□□□□ -0.21
NR1H3-223	ENST00000486991	SEMA4G	Q9NTN9	838 aa		13.75	□□□□□ -0.21
NR1H3-223	ENST00000486991	ARHGAP20	Q9P2F6	1191 aa		13.75	□□□□□ -0.21
NR1H3-223	ENST00000486991	TSPAN16	Q9UKR8	245 aa		13.75	□□□□□ -0.21
NR1H3-223	ENST00000486991	WDR3	Q9UNX4	943 aa	Known RBP eCLIP	13.75	□□□□□ -0.21
NR1H3-223	ENST00000486991	CCL26	Q9Y258	94 aa		13.75	□□□□□ -0.21
NR1H3-223	ENST00000486991	LAMA1	P25391	3075 aa		13.75	□□□□□ -0.21
NR1H3-223	ENST00000486991	FAM170A	A1A519	330 aa		13.74	□□□□□ -0.21
NR1H3-223	ENST00000486991		F8VP50	259 aa		13.74	□□□□□ -0.21
NR1H3-223	ENST00000486991	AP1G2	O75843	785 aa		13.74	□□□□□ -0.21
NR1H3-223	ENST00000486991	RET	P07949	1114 aa		13.74	□□□□□ -0.21
NR1H3-223	ENST00000486991	AVPR1A	P37288	418 aa		13.74	□□□□□ -0.21
NR1H3-223	ENST00000486991	FMO1	Q01740	532 aa		13.74	□□□□□ -0.21
NR1H3-223	ENST00000486991	LRRC32	Q14392	662 aa		13.74	□□□□□ -0.21
NR1H3-223	ENST00000486991	ARHGAP29	Q52LW3	1261 aa		13.74	□□□□□ -0.21
NR1H3-223	ENST00000486991	TXNDC8	Q6A555	127 aa		13.74	□□□□□ -0.21
NR1H3-223	ENST00000486991	DENND1B	Q6P3S1	775 aa		13.74	□□□□□ -0.21
NR1H3-223	ENST00000486991	LCLAT1	Q6UWP7	414 aa		13.74	□□□□□ -0.21
NR1H3-223	ENST00000486991	VPS36	Q86VN1	386 aa		13.74	□□□□□ -0.21
NR1H3-223	ENST00000486991	MON1A	Q86VX9	555 aa		13.74	□□□□□ -0.21
NR1H3-223	ENST00000486991	SCN4B	Q8IWT1	228 aa		13.74	□□□□□ -0.21
NR1H3-223	ENST00000486991	LRRC8A	Q8IWT6	810 aa		13.74	□□□□□ -0.21
NR1H3-223	ENST00000486991	UBA3	Q8TBC4	463 aa		13.74	□□□□□ -0.21
NR1H3-223	ENST00000486991	USP13	Q92995	863 aa	Predicted RBP	13.74	□□□□□ -0.21
NR1H3-223	ENST00000486991	C8orf48	Q96LL4	319 aa		13.74	□□□□□ -0.21
NR1H3-223	ENST00000486991	RTKN	Q9BST9	563 aa		13.74	□□□□□ -0.21
NR1H3-223	ENST00000486991	IER2	Q9BTL4	223 aa		13.74	□□□□□ -0.21
NR1H3-223	ENST00000486991	KRT82	Q9NSB4	513 aa		13.74	□□□□□ -0.21
NR1H3-223	ENST00000486991	MAGED2	Q9UNF1	606 aa	Predicted RBP	13.74	□□□□□ -0.21
NR1H3-223	ENST00000486991	OTOL1	A6NHN0	477 aa	Predicted RBP	13.73	□□□□□ -0.21
NR1H3-223	ENST00000486991	AXIN1	O15169	862 aa		13.73	□□□□□ -0.21
NR1H3-223	ENST00000486991	FAM200B	P0CF97	657 aa		13.73	□□□□□ -0.21
NR1H3-223	ENST00000486991	SDHB	P21912	280 aa		13.73	□□□□□ -0.21
NR1H3-223	ENST00000486991	KCNA4	P22459	653 aa		13.73	□□□□□ -0.21
NR1H3-223	ENST00000486991	ANXA13	P27216	316 aa		13.73	□□□□□ -0.21
NR1H3-223	ENST00000486991	BCAT1	P54687	386 aa		13.73	□□□□□ -0.21
NR1H3-223	ENST00000486991	CDK17	Q00537	523 aa		13.73	□□□□□ -0.21
NR1H3-223	ENST00000486991	PPM1J	Q5JR12	505 aa		13.73	□□□□□ -0.21
NR1H3-223	ENST00000486991	NAIF1	Q69YI7	327 aa	Predicted RBP	13.73	□□□□□ -0.21
NR1H3-223	ENST00000486991	TRIM68	Q6AZZ1	485 aa		13.73	□□□□□ -0.21
NR1H3-223	ENST00000486991	PRR23C	Q6ZRP0	262 aa		13.73	□□□□□ -0.21
NR1H3-223	ENST00000486991	CEP68	Q76N32	757 aa		13.73	□□□□□ -0.21
NR1H3-223	ENST00000486991	LONP2	Q86WA8	852 aa		13.73	□□□□□ -0.21
NR1H3-223	ENST00000486991	TTC30A	Q86WT1	665 aa		13.73	□□□□□ -0.21
NR1H3-223	ENST00000486991	RALGPS2	Q86X27	583 aa	Predicted RBP	13.73	□□□□□ -0.21
NR1H3-223	ENST00000486991	TMTC1	Q8IUR5	882 aa		13.73	□□□□□ -0.21
NR1H3-223	ENST00000486991	FAM160A2	Q8N612	972 aa	Predicted RBP	13.73	□□□□□ -0.21
NR1H3-223	ENST00000486991	MAB21L3	Q8N8X9	362 aa		13.73	□□□□□ -0.21
NR1H3-223	ENST00000486991	ANKRD52	Q8NB46	1076 aa		13.73	□□□□□ -0.21
NR1H3-223	ENST00000486991	BPIFB1	Q8TDL5	484 aa		13.73	□□□□□ -0.21
NR1H3-223	ENST00000486991	CHFR	Q96EP1	664 aa		13.73	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 29 ms