RNA–Protein interactions for RNA: ENST00000486641.2

CCDC171-208, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 2,322 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-208ENST00000486641 BIRC8Q96P09 236 aa11.02□□□□□ -0.65
CCDC171-208ENST00000486641 TRIM56Q9BRZ2 755 aaKnown RBP11.02□□□□□ -0.65
CCDC171-208ENST00000486641 KIFC3Q9BVG8 833 aa11.02□□□□□ -0.65
CCDC171-208ENST00000486641 OSBPL6Q9BZF3 934 aa11.02□□□□□ -0.65
CCDC171-208ENST00000486641 ST6GALNAC4Q9H4F1 302 aa11.02□□□□□ -0.65
CCDC171-208ENST00000486641 PNPOQ9NVS9 261 aa11.02□□□□□ -0.65
CCDC171-208ENST00000486641 DDX56Q9NY93 547 aaKnown RBP11.02□□□□□ -0.65
CCDC171-208ENST00000486641 PKD2L1Q9P0L9 805 aa11.02□□□□□ -0.65
CCDC171-208ENST00000486641 RIMS3Q9UJD0 308 aa11.02□□□□□ -0.65
CCDC171-208ENST00000486641 TBX20Q9UMR3 447 aa11.02□□□□□ -0.65
CCDC171-208ENST00000486641 HMX2A2RU54 273 aa11.01□□□□□ -0.65
CCDC171-208ENST00000486641 ADCY6O43306 1168 aa11.01□□□□□ -0.65
CCDC171-208ENST00000486641 ZC3H11AO75152 810 aaKnown RBP eCLIP11.01□□□□□ -0.65
CCDC171-208ENST00000486641 GSRP00390 522 aa11.01□□□□□ -0.65
CCDC171-208ENST00000486641 CRHR1P34998 444 aa11.01□□□□□ -0.65
CCDC171-208ENST00000486641 SLC1A6P48664 564 aa11.01□□□□□ -0.65
CCDC171-208ENST00000486641 PSMD7P51665 324 aa11.01□□□□□ -0.65
CCDC171-208ENST00000486641 MRPS22P82650 360 aaKnown RBP11.01□□□□□ -0.65
CCDC171-208ENST00000486641 PFKPQ01813 784 aa11.01□□□□□ -0.65
CCDC171-208ENST00000486641 PSMD6Q15008 389 aa11.01□□□□□ -0.65
CCDC171-208ENST00000486641 SMTNL2Q2TAL5 461 aa11.01□□□□□ -0.65
CCDC171-208ENST00000486641 KCNT1Q5JUK3 1230 aa11.01□□□□□ -0.65
CCDC171-208ENST00000486641 LGSNQ5TDP6 509 aa11.01□□□□□ -0.65
CCDC171-208ENST00000486641 TATDN1Q6P1N9 297 aa11.01□□□□□ -0.65
CCDC171-208ENST00000486641 LPCAT2Q7L5N7 544 aa11.01□□□□□ -0.65
CCDC171-208ENST00000486641 ARCQ7LC44 396 aa11.01□□□□□ -0.65
CCDC171-208ENST00000486641 POLNQ7Z5Q5 900 aa11.01□□□□□ -0.65
CCDC171-208ENST00000486641 ZFPM1Q8IX07 1006 aa11.01□□□□□ -0.65
CCDC171-208ENST00000486641 ADCY4Q8NFM4 1077 aa11.01□□□□□ -0.65
CCDC171-208ENST00000486641 GRIN3AQ8TCU5 1115 aa11.01□□□□□ -0.65
CCDC171-208ENST00000486641 ABHD8Q96I13 439 aa11.01□□□□□ -0.65
CCDC171-208ENST00000486641 KCNK16Q96T55 309 aa11.01□□□□□ -0.65
CCDC171-208ENST00000486641 CCT7Q99832 543 aa11.01□□□□□ -0.65
CCDC171-208ENST00000486641 SLC2A11Q9BYW1 496 aa11.01□□□□□ -0.65
CCDC171-208ENST00000486641 TSPYL2Q9H2G4 693 aaPredicted RBP11.01□□□□□ -0.65
CCDC171-208ENST00000486641 TUT1Q9H6E5 874 aaKnown RBP11.01□□□□□ -0.65
CCDC171-208ENST00000486641 MKS1Q9NXB0 559 aa11.01□□□□□ -0.65
CCDC171-208ENST00000486641 NYAP2Q9P242 653 aa11.01□□□□□ -0.65
CCDC171-208ENST00000486641 PCDHB4Q9Y5E5 795 aa11.01□□□□□ -0.65
CCDC171-208ENST00000486641 FAM189A1O60320 539 aa11.01□□□□□ -0.65
CCDC171-208ENST00000486641 TBC1D12O60347 775 aa11.01□□□□□ -0.65
CCDC171-208ENST00000486641 E2F6O75461 281 aa11.01□□□□□ -0.65
CCDC171-208ENST00000486641 SPAG6O75602 509 aa11.01□□□□□ -0.65
CCDC171-208ENST00000486641 ALDH2P05091 517 aa11.01□□□□□ -0.65
CCDC171-208ENST00000486641 COX4I1P13073 169 aa11.01□□□□□ -0.65
CCDC171-208ENST00000486641 CD1EP15812 388 aa11.01□□□□□ -0.65
CCDC171-208ENST00000486641 ALOX15P16050 662 aaPredicted RBP11.01□□□□□ -0.65
CCDC171-208ENST00000486641 ZNF23P17027 643 aa11.01□□□□□ -0.65
CCDC171-208ENST00000486641 MMP8P22894 467 aa11.01□□□□□ -0.65
CCDC171-208ENST00000486641 ACAT1P24752 427 aaKnown RBP11.01□□□□□ -0.65
CCDC171-208ENST00000486641 MSX2P35548 267 aaPredicted RBP11.01□□□□□ -0.65
CCDC171-208ENST00000486641 AOC3Q16853 763 aa11.01□□□□□ -0.65
CCDC171-208ENST00000486641 PDCD4Q53EL6 469 aaKnown RBP11.01□□□□□ -0.65
CCDC171-208ENST00000486641 MROH9Q5TGP6 573 aa11.01□□□□□ -0.65
CCDC171-208ENST00000486641 MBLAC2Q68D91 279 aa11.01□□□□□ -0.65
CCDC171-208ENST00000486641 C16orf46Q6P387 395 aa11.01□□□□□ -0.65
CCDC171-208ENST00000486641 SLC39A4Q6P5W5 647 aa11.01□□□□□ -0.65
CCDC171-208ENST00000486641 DCUN1D2Q6PH85 259 aa11.01□□□□□ -0.65
CCDC171-208ENST00000486641 DQX1Q8TE96 717 aaKnown RBP11.01□□□□□ -0.65
CCDC171-208ENST00000486641 CCDC17Q96LX7 622 aa11.01□□□□□ -0.65
CCDC171-208ENST00000486641 FBXL18Q96ME1 805 aa11.01□□□□□ -0.65
CCDC171-208ENST00000486641 BRD8Q9H0E9 1235 aa11.01□□□□□ -0.65
CCDC171-208ENST00000486641 STN1Q9H668 368 aaKnown RBP11.01□□□□□ -0.65
CCDC171-208ENST00000486641 PLAC1Q9HBJ0 212 aa11.01□□□□□ -0.65
CCDC171-208ENST00000486641 ZBTB21Q9ULJ3 1066 aa11.01□□□□□ -0.65
CCDC171-208ENST00000486641 ARHGAP26Q9UNA1 814 aa11.01□□□□□ -0.65
CCDC171-208ENST00000486641 EXOC7Q9UPT5 735 aa11.01□□□□□ -0.65
CCDC171-208ENST00000486641 TCRBV5S1A1TA0A578 114 aa11□□□□□ -0.65
CCDC171-208ENST00000486641 DCXO43602 365 aa11□□□□□ -0.65
CCDC171-208ENST00000486641 CBFA2T3O75081 653 aa11□□□□□ -0.65
CCDC171-208ENST00000486641 HLA-DOAP06340 250 aa11□□□□□ -0.65
CCDC171-208ENST00000486641 CSH1P0DML2 217 aa11□□□□□ -0.65
CCDC171-208ENST00000486641 CSH2P0DML3 217 aa11□□□□□ -0.65
CCDC171-208ENST00000486641 FGF3P11487 239 aaPredicted RBP11□□□□□ -0.65
CCDC171-208ENST00000486641 ALDH3B2P48448 385 aa11□□□□□ -0.65
CCDC171-208ENST00000486641 RPL10AP62906 217 aaKnown RBP11□□□□□ -0.65
CCDC171-208ENST00000486641 PDAP1Q13442 181 aaKnown RBP11□□□□□ -0.65
CCDC171-208ENST00000486641 TGFBIQ15582 683 aa11□□□□□ -0.65
CCDC171-208ENST00000486641 KCTD21Q4G0X4 260 aa11□□□□□ -0.65
CCDC171-208ENST00000486641 CCDC92Q53HC0 331 aaPredicted RBP11□□□□□ -0.65
CCDC171-208ENST00000486641 WDR44Q5JSH3 913 aa11□□□□□ -0.65
CCDC171-208ENST00000486641 C15orf39Q6ZRI6 1047 aa11□□□□□ -0.65
CCDC171-208ENST00000486641 MIER3Q7Z3K6 550 aa11□□□□□ -0.65
CCDC171-208ENST00000486641 LZTR1Q8N653 840 aa11□□□□□ -0.65
CCDC171-208ENST00000486641 CATSPER1Q8NEC5 780 aa11□□□□□ -0.65
CCDC171-208ENST00000486641 HSPH1Q92598 858 aa11□□□□□ -0.65
CCDC171-208ENST00000486641 RANBP9Q96S59 729 aa11□□□□□ -0.65
CCDC171-208ENST00000486641 PKP2Q99959 881 aa11□□□□□ -0.65
CCDC171-208ENST00000486641 STK39Q9UEW8 545 aa11□□□□□ -0.65
CCDC171-208ENST00000486641 SERPINA10Q9UK55 444 aa11□□□□□ -0.65
CCDC171-208ENST00000486641 RNF11Q9Y3C5 154 aa11□□□□□ -0.65
CCDC171-208ENST00000486641 LOXHD1Q8IVV2 1947 aa11□□□□□ -0.65
CCDC171-208ENST00000486641 ZNF195O14628 629 aa11□□□□□ -0.65
CCDC171-208ENST00000486641 XPO1O14980 1071 aaKnown RBP11□□□□□ -0.65
CCDC171-208ENST00000486641 FOXD2O60548 495 aaPredicted RBP11□□□□□ -0.65
CCDC171-208ENST00000486641 NDUFB10O96000 172 aa11□□□□□ -0.65
CCDC171-208ENST00000486641 HALP42357 657 aa11□□□□□ -0.65
CCDC171-208ENST00000486641 PHKA2P46019 1235 aa11□□□□□ -0.65
CCDC171-208ENST00000486641 EIF3EP60228 445 aaKnown RBP11□□□□□ -0.65
CCDC171-208ENST00000486641 GTF2IP78347 998 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms