RNA–Protein interactions for RNA: ENST00000486533.1

COL12A1-208, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL12A1, Length 1,554 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-208ENST00000486533 GTF2BQ00403 316 aa9.46□□□□□ -0.9
COL12A1-208ENST00000486533 IFT88Q13099 833 aa9.46□□□□□ -0.9
COL12A1-208ENST00000486533 TDGQ13569 410 aa9.46□□□□□ -0.9
COL12A1-208ENST00000486533 PPP1R7Q15435 360 aa9.46□□□□□ -0.9
COL12A1-208ENST00000486533 LACTB2Q53H82 288 aaPredicted RBP9.46□□□□□ -0.9
COL12A1-208ENST00000486533 PPM1LQ5SGD2 360 aa9.46□□□□□ -0.9
COL12A1-208ENST00000486533 ALKAL1Q6UXT8 129 aa9.46□□□□□ -0.9
COL12A1-208ENST00000486533 ZPBP2Q6X784 338 aa9.46□□□□□ -0.9
COL12A1-208ENST00000486533 TRIM72Q6ZMU5 477 aa9.46□□□□□ -0.9
COL12A1-208ENST00000486533 DDX42Q86XP3 938 aaKnown RBP eCLIP9.46□□□□□ -0.9
COL12A1-208ENST00000486533 CCDC105Q8IYK2 499 aa9.46□□□□□ -0.9
COL12A1-208ENST00000486533 FAM71AQ8IYT1 594 aa9.46□□□□□ -0.9
COL12A1-208ENST00000486533 GBP7Q8N8V2 638 aaPredicted RBP9.46□□□□□ -0.9
COL12A1-208ENST00000486533 SLC7A14Q8TBB6 771 aa9.46□□□□□ -0.9
COL12A1-208ENST00000486533 ZNF564Q8TBZ8 553 aaPredicted RBP9.46□□□□□ -0.9
COL12A1-208ENST00000486533 CCHCR1Q8TD31 782 aa9.46□□□□□ -0.9
COL12A1-208ENST00000486533 C18orf25Q96B23 403 aaPredicted RBP9.46□□□□□ -0.9
COL12A1-208ENST00000486533 ZNF653Q96CK0 615 aa9.46□□□□□ -0.9
COL12A1-208ENST00000486533 SEC16BQ96JE7 1060 aa9.46□□□□□ -0.9
COL12A1-208ENST00000486533 ZMAT2Q96NC0 199 aaKnown RBP9.46□□□□□ -0.9
COL12A1-208ENST00000486533 FIZ1Q96SL8 496 aa9.46□□□□□ -0.9
COL12A1-208ENST00000486533 PRRX2Q99811 253 aa9.46□□□□□ -0.9
COL12A1-208ENST00000486533 CCDC77Q9BR77 488 aa9.46□□□□□ -0.9
COL12A1-208ENST00000486533 TRIM51Q9BSJ1 452 aa9.46□□□□□ -0.9
COL12A1-208ENST00000486533 CCDC134Q9H6E4 229 aa9.46□□□□□ -0.9
COL12A1-208ENST00000486533 TMEM8AQ9HCN3 771 aa9.46□□□□□ -0.9
COL12A1-208ENST00000486533 ZDHHC18Q9NUE0 388 aa9.46□□□□□ -0.9
COL12A1-208ENST00000486533 HSPBP1Q9NZL4 362 aa9.46□□□□□ -0.9
COL12A1-208ENST00000486533 CNTN3Q9P232 1028 aa9.46□□□□□ -0.9
COL12A1-208ENST00000486533 NUB1Q9Y5A7 615 aa9.46□□□□□ -0.9
COL12A1-208ENST00000486533 CDY1Q9Y6F8 540 aa9.46□□□□□ -0.9
COL12A1-208ENST00000486533 DOCK6Q96HP0 2047 aa9.45□□□□□ -0.9
COL12A1-208ENST00000486533 CFAP73A6NFT4 308 aa9.45□□□□□ -0.9
COL12A1-208ENST00000486533 FOXN3O00409 490 aaPredicted RBP9.45□□□□□ -0.9
COL12A1-208ENST00000486533 HNRNPDLO14979 420 aaKnown RBP9.45□□□□□ -0.9
COL12A1-208ENST00000486533 CCL16O15467 120 aa9.45□□□□□ -0.9
COL12A1-208ENST00000486533 LRRN2O75325 713 aa9.45□□□□□ -0.9
COL12A1-208ENST00000486533 MMEP08473 750 aa9.45□□□□□ -0.9
COL12A1-208ENST00000486533 CXCL8P10145 99 aa9.45□□□□□ -0.9
COL12A1-208ENST00000486533 KCNE1P15382 129 aa9.45□□□□□ -0.9
COL12A1-208ENST00000486533 AVPR2P30518 371 aa9.45□□□□□ -0.9
COL12A1-208ENST00000486533 SLC8A1P32418 973 aa9.45□□□□□ -0.9
COL12A1-208ENST00000486533 MLLT3P42568 568 aaPredicted RBP9.45□□□□□ -0.9
COL12A1-208ENST00000486533 MMP13P45452 471 aa9.45□□□□□ -0.9
COL12A1-208ENST00000486533 LIG4P49917 911 aa9.45□□□□□ -0.9
COL12A1-208ENST00000486533 PLTPP55058 493 aa9.45□□□□□ -0.9
COL12A1-208ENST00000486533 CDR2Q01850 454 aa9.45□□□□□ -0.9
COL12A1-208ENST00000486533 CENPCQ03188 943 aa9.45□□□□□ -0.9
COL12A1-208ENST00000486533 XKR4Q5GH76 650 aa9.45□□□□□ -0.9
COL12A1-208ENST00000486533 ERMARDQ5T6L9 678 aa9.45□□□□□ -0.9
COL12A1-208ENST00000486533 PHLDB3Q6NSJ2 640 aa9.45□□□□□ -0.9
COL12A1-208ENST00000486533 CCDC137Q6PK04 289 aaKnown RBP9.45□□□□□ -0.9
COL12A1-208ENST00000486533 C6orf89Q6UWU4 347 aa9.45□□□□□ -0.9
COL12A1-208ENST00000486533 ANKS3Q6ZW76 656 aa9.45□□□□□ -0.9
COL12A1-208ENST00000486533 HAUS6Q7Z4H7 955 aa9.45□□□□□ -0.9
COL12A1-208ENST00000486533 GRASPQ7Z6J2 395 aaPredicted RBP9.45□□□□□ -0.9
COL12A1-208ENST00000486533 SLC13A5Q86YT5 568 aaPredicted RBP9.45□□□□□ -0.9
COL12A1-208ENST00000486533 PRSS33Q8NF86 280 aa9.45□□□□□ -0.9
COL12A1-208ENST00000486533 RSAD2Q8WXG1 361 aa9.45□□□□□ -0.9
COL12A1-208ENST00000486533 SHC3Q92529 594 aa9.45□□□□□ -0.9
COL12A1-208ENST00000486533 RAPGEF5Q92565 580 aa9.45□□□□□ -0.9
COL12A1-208ENST00000486533 MYADMQ96S97 322 aa9.45□□□□□ -0.9
COL12A1-208ENST00000486533 SELENOSQ9BQE4 189 aa9.45□□□□□ -0.9
COL12A1-208ENST00000486533 GPR88Q9GZN0 384 aa9.45□□□□□ -0.9
COL12A1-208ENST00000486533 NEUROG2Q9H2A3 272 aa9.45□□□□□ -0.9
COL12A1-208ENST00000486533 AVENQ9NQS1 362 aaPredicted RBP9.45□□□□□ -0.9
COL12A1-208ENST00000486533 INTS9Q9NV88 658 aaKnown RBP9.45□□□□□ -0.9
COL12A1-208ENST00000486533 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.45□□□□□ -0.9
COL12A1-208ENST00000486533 IGSF9Q9P2J2 1179 aa9.45□□□□□ -0.9
COL12A1-208ENST00000486533 MTRRQ9UBK8 725 aa9.45□□□□□ -0.9
COL12A1-208ENST00000486533 FBXL21Q9UKT6 434 aa9.45□□□□□ -0.9
COL12A1-208ENST00000486533 PCDHA3Q9Y5H8 950 aa9.45□□□□□ -0.9
COL12A1-208ENST00000486533 PDCD11Q14690 1871 aaKnown RBP9.45□□□□□ -0.9
COL12A1-208ENST00000486533 RASGRF2O14827 1237 aa9.44□□□□□ -0.9
COL12A1-208ENST00000486533 XYLBO75191 536 aa9.44□□□□□ -0.9
COL12A1-208ENST00000486533 DNAJC8O75937 253 aaPredicted RBP9.44□□□□□ -0.9
COL12A1-208ENST00000486533 HNRNPA1P09651 372 aaKnown RBP eCLIP9.44□□□□□ -0.9
COL12A1-208ENST00000486533 ITIH2P19823 946 aa9.44□□□□□ -0.9
COL12A1-208ENST00000486533 FSHRP23945 695 aa9.44□□□□□ -0.9
COL12A1-208ENST00000486533 HNRNPH1P31943 449 aaKnown RBP9.44□□□□□ -0.9
COL12A1-208ENST00000486533 RPL9P32969 192 aaKnown RBP9.44□□□□□ -0.9
COL12A1-208ENST00000486533 COILP38432 576 aaPredicted RBP9.44□□□□□ -0.9
COL12A1-208ENST00000486533 MCL1Q07820 350 aa9.44□□□□□ -0.9
COL12A1-208ENST00000486533 KCNA1Q09470 495 aa9.44□□□□□ -0.9
COL12A1-208ENST00000486533 RAB33AQ14088 237 aa9.44□□□□□ -0.9
COL12A1-208ENST00000486533 MESDQ14696 234 aa9.44□□□□□ -0.9
COL12A1-208ENST00000486533 SLC10A6Q3KNW5 377 aa9.44□□□□□ -0.9
COL12A1-208ENST00000486533 CD300LGQ6UXG3 332 aa9.44□□□□□ -0.9
COL12A1-208ENST00000486533 ALYREFQ86V81 257 aaKnown RBP9.44□□□□□ -0.9
COL12A1-208ENST00000486533 RIBC1Q8N443 379 aaPredicted RBP9.44□□□□□ -0.9
COL12A1-208ENST00000486533 FBXL13Q8NEE6 735 aa9.44□□□□□ -0.9
COL12A1-208ENST00000486533 FLCNQ8NFG4 579 aa9.44□□□□□ -0.9
COL12A1-208ENST00000486533 OR2W6PQ8NHA6 318 aa9.44□□□□□ -0.9
COL12A1-208ENST00000486533 LMO3Q8TAP4 145 aa9.44□□□□□ -0.9
COL12A1-208ENST00000486533 MAGEC3Q8TD91 643 aa9.44□□□□□ -0.9
COL12A1-208ENST00000486533 DYDC1Q8WWB3 177 aa9.44□□□□□ -0.9
COL12A1-208ENST00000486533 ARHGEF26Q96DR7 871 aa9.44□□□□□ -0.9
COL12A1-208ENST00000486533 SERPINB12Q96P63 405 aa9.44□□□□□ -0.9
COL12A1-208ENST00000486533 TRIM31Q9BZY9 425 aa9.44□□□□□ -0.9
COL12A1-208ENST00000486533 GOLPH3Q9H4A6 298 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms