RNA–Protein interactions for RNA: ENST00000486325.1

VTI1BP1-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 1, humanhuman

BASIC

Gene VTI1BP1, Length 700 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP1-201ENST00000486325 SLC7A14Q8TBB6 771 aa13.83□□□□□ -0.2
VTI1BP1-201ENST00000486325 ACTRT1Q8TDG2 376 aa13.83□□□□□ -0.2
VTI1BP1-201ENST00000486325 MAIP1Q8WWC4 291 aa13.83□□□□□ -0.2
VTI1BP1-201ENST00000486325 ARNTL2Q8WYA1 636 aa13.83□□□□□ -0.2
VTI1BP1-201ENST00000486325 EDEM1Q92611 657 aa13.83□□□□□ -0.2
VTI1BP1-201ENST00000486325 KRT35Q92764 455 aa13.83□□□□□ -0.2
VTI1BP1-201ENST00000486325 PSMG2Q969U7 264 aa13.83□□□□□ -0.2
VTI1BP1-201ENST00000486325 RPGRIP1Q96KN7 1286 aa13.83□□□□□ -0.2
VTI1BP1-201ENST00000486325 TRPM5Q9NZQ8 1165 aa13.83□□□□□ -0.2
VTI1BP1-201ENST00000486325 GMIPQ9P107 970 aa13.83□□□□□ -0.2
VTI1BP1-201ENST00000486325 SRGAP2O75044 1071 aa13.82□□□□□ -0.2
VTI1BP1-201ENST00000486325 FGF19O95750 216 aa13.82□□□□□ -0.2
VTI1BP1-201ENST00000486325 C8AP07357 584 aa13.82□□□□□ -0.2
VTI1BP1-201ENST00000486325 HNRNPA1P09651 372 aaKnown RBP eCLIP13.82□□□□□ -0.2
VTI1BP1-201ENST00000486325 SPATA31D3P0C874 917 aa13.82□□□□□ -0.2
VTI1BP1-201ENST00000486325 SLC2A3P11169 496 aa13.82□□□□□ -0.2
VTI1BP1-201ENST00000486325 RARGP13631 454 aa13.82□□□□□ -0.2
VTI1BP1-201ENST00000486325 HMGA1P17096 107 aaKnown RBP13.82□□□□□ -0.2
VTI1BP1-201ENST00000486325 HOXA9P31269 272 aa13.82□□□□□ -0.2
VTI1BP1-201ENST00000486325 CXCR5P32302 372 aa13.82□□□□□ -0.2
VTI1BP1-201ENST00000486325 IRS1P35568 1242 aa13.82□□□□□ -0.2
VTI1BP1-201ENST00000486325 HDAC4P56524 1084 aa13.82□□□□□ -0.2
VTI1BP1-201ENST00000486325 SLC25A11Q02978 314 aaKnown RBP13.82□□□□□ -0.2
VTI1BP1-201ENST00000486325 MTA1Q13330 715 aa13.82□□□□□ -0.2
VTI1BP1-201ENST00000486325 MTMR3Q13615 1198 aa13.82□□□□□ -0.2
VTI1BP1-201ENST00000486325 PDK2Q15119 407 aa13.82□□□□□ -0.2
VTI1BP1-201ENST00000486325 PPM1LQ5SGD2 360 aa13.82□□□□□ -0.2
VTI1BP1-201ENST00000486325 ERMARDQ5T6L9 678 aa13.82□□□□□ -0.2
VTI1BP1-201ENST00000486325 SH3PXD2AQ5TCZ1 1133 aa13.82□□□□□ -0.2
VTI1BP1-201ENST00000486325 MSANTD2Q6P1R3 559 aa13.82□□□□□ -0.2
VTI1BP1-201ENST00000486325 SPATA31D4Q6ZUB0 917 aa13.82□□□□□ -0.2
VTI1BP1-201ENST00000486325 SPRED2Q7Z698 418 aa13.82□□□□□ -0.2
VTI1BP1-201ENST00000486325 CREG2Q8IUH2 290 aa13.82□□□□□ -0.2
VTI1BP1-201ENST00000486325 KCTD6Q8NC69 237 aa13.82□□□□□ -0.2
VTI1BP1-201ENST00000486325 CMASQ8NFW8 434 aaPredicted RBP13.82□□□□□ -0.2
VTI1BP1-201ENST00000486325 SLC22A17Q8WUG5 538 aa13.82□□□□□ -0.2
VTI1BP1-201ENST00000486325 ALG3Q92685 438 aa13.82□□□□□ -0.2
VTI1BP1-201ENST00000486325 SERPINB11Q96P15 392 aa13.82□□□□□ -0.2
VTI1BP1-201ENST00000486325 PSMB7Q99436 277 aa13.82□□□□□ -0.2
VTI1BP1-201ENST00000486325 CDCA3Q99618 268 aaPredicted RBP13.82□□□□□ -0.2
VTI1BP1-201ENST00000486325 TLE6Q9H808 572 aa13.82□□□□□ -0.2
VTI1BP1-201ENST00000486325 FAM204AQ9H8W3 233 aa13.82□□□□□ -0.2
VTI1BP1-201ENST00000486325 NMUR1Q9HB89 426 aa13.82□□□□□ -0.2
VTI1BP1-201ENST00000486325 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.82□□□□□ -0.2
VTI1BP1-201ENST00000486325 DDIT4Q9NX09 232 aa13.82□□□□□ -0.2
VTI1BP1-201ENST00000486325 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.82□□□□□ -0.2
VTI1BP1-201ENST00000486325 PCSK1NQ9UHG2 260 aa13.82□□□□□ -0.2
VTI1BP1-201ENST00000486325 PATJQ8NI35 1801 aa13.82□□□□□ -0.2
VTI1BP1-201ENST00000486325 MDM4O15151 490 aa13.81□□□□□ -0.2
VTI1BP1-201ENST00000486325 ZMYND10O75800 440 aa13.81□□□□□ -0.2
VTI1BP1-201ENST00000486325 PYGMP11217 842 aa13.81□□□□□ -0.2
VTI1BP1-201ENST00000486325 CXCR3P49682 368 aa13.81□□□□□ -0.2
VTI1BP1-201ENST00000486325 NNTQ13423 1086 aa13.81□□□□□ -0.2
VTI1BP1-201ENST00000486325 KLHDC10Q6PID8 442 aa13.81□□□□□ -0.2
VTI1BP1-201ENST00000486325 VSIG1Q86XK7 387 aa13.81□□□□□ -0.2
VTI1BP1-201ENST00000486325 CPNE8Q86YQ8 564 aa13.81□□□□□ -0.2
VTI1BP1-201ENST00000486325 DQX1Q8TE96 717 aaKnown RBP13.81□□□□□ -0.2
VTI1BP1-201ENST00000486325 COG1Q8WTW3 980 aa13.81□□□□□ -0.2
VTI1BP1-201ENST00000486325 RNF34Q969K3 372 aa13.81□□□□□ -0.2
VTI1BP1-201ENST00000486325 NTAN1Q96AB6 310 aa13.81□□□□□ -0.2
VTI1BP1-201ENST00000486325 PRO3102Q9H379 93 aa13.81□□□□□ -0.2
VTI1BP1-201ENST00000486325 SMOC2Q9H3U7 446 aa13.81□□□□□ -0.2
VTI1BP1-201ENST00000486325 WDCPQ9H6R7 721 aa13.81□□□□□ -0.2
VTI1BP1-201ENST00000486325 ZWILCHQ9H900 591 aa13.81□□□□□ -0.2
VTI1BP1-201ENST00000486325 CERS4Q9HA82 394 aa13.81□□□□□ -0.2
VTI1BP1-201ENST00000486325 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.81□□□□□ -0.2
VTI1BP1-201ENST00000486325 EFR3BQ9Y2G0 817 aa13.81□□□□□ -0.2
VTI1BP1-201ENST00000486325 PDE4DIPQ5VU43 2346 aa13.8□□□□□ -0.2
VTI1BP1-201ENST00000486325 CTAGE15A4D2H0 777 aa13.8□□□□□ -0.2
VTI1BP1-201ENST00000486325 ZNF840PA6NDX5 716 aa13.8□□□□□ -0.2
VTI1BP1-201ENST00000486325 PGRMC1O00264 195 aaKnown RBP13.8□□□□□ -0.2
VTI1BP1-201ENST00000486325 ZNF185O15231 689 aa13.8□□□□□ -0.2
VTI1BP1-201ENST00000486325 XYLBO75191 536 aa13.8□□□□□ -0.2
VTI1BP1-201ENST00000486325 KRT1P04264 644 aa13.8□□□□□ -0.2
VTI1BP1-201ENST00000486325 POU2F2P09086 479 aa13.8□□□□□ -0.2
VTI1BP1-201ENST00000486325 CTAGE8P0CG41 777 aa13.8□□□□□ -0.2
VTI1BP1-201ENST00000486325 RARAP10276 462 aa13.8□□□□□ -0.2
VTI1BP1-201ENST00000486325 PTPN2P17706 415 aa13.8□□□□□ -0.2
VTI1BP1-201ENST00000486325 KDELR1P24390 212 aa13.8□□□□□ -0.2
VTI1BP1-201ENST00000486325 IL1R2P27930 398 aa13.8□□□□□ -0.2
VTI1BP1-201ENST00000486325 ATP5C1P36542 298 aaKnown RBP13.8□□□□□ -0.2
VTI1BP1-201ENST00000486325 MARCKSL1P49006 195 aa13.8□□□□□ -0.2
VTI1BP1-201ENST00000486325 TUBP50607 506 aa13.8□□□□□ -0.2
VTI1BP1-201ENST00000486325 ZNF135P52742 658 aaPredicted RBP13.8□□□□□ -0.2
VTI1BP1-201ENST00000486325 MLLT1Q03111 559 aaPredicted RBP13.8□□□□□ -0.2
VTI1BP1-201ENST00000486325 ITIH3Q06033 890 aa13.8□□□□□ -0.2
VTI1BP1-201ENST00000486325 NME3Q13232 169 aa13.8□□□□□ -0.2
VTI1BP1-201ENST00000486325 PPP2R5EQ16537 467 aa13.8□□□□□ -0.2
VTI1BP1-201ENST00000486325 BRMS1LQ5PSV4 323 aa13.8□□□□□ -0.2
VTI1BP1-201ENST00000486325 HECTD3Q5T447 861 aa13.8□□□□□ -0.2
VTI1BP1-201ENST00000486325 ACBD5Q5T8D3 534 aaPredicted RBP13.8□□□□□ -0.2
VTI1BP1-201ENST00000486325 DAB2IPQ5VWQ8 1189 aa13.8□□□□□ -0.2
VTI1BP1-201ENST00000486325 CHRDL2Q6WN34 429 aa13.8□□□□□ -0.2
VTI1BP1-201ENST00000486325 CTAGE6Q86UF2 777 aa13.8□□□□□ -0.2
VTI1BP1-201ENST00000486325 CCDC50Q8IVM0 306 aa13.8□□□□□ -0.2
VTI1BP1-201ENST00000486325 CTAGE4Q8IX94 777 aa13.8□□□□□ -0.2
VTI1BP1-201ENST00000486325 LEMD2Q8NC56 503 aa13.8□□□□□ -0.2
VTI1BP1-201ENST00000486325 MRPL38Q96DV4 380 aaKnown RBP13.8□□□□□ -0.2
VTI1BP1-201ENST00000486325 CAPZA3Q96KX2 299 aa13.8□□□□□ -0.2
VTI1BP1-201ENST00000486325 PRDM16Q9HAZ2 1276 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms