RNA–Protein interactions for RNA: ENST00000486254.3

PKP4-213, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 1,566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-213ENST00000486254 CSPG4P5Q96PW8 444 aa12.43□□□□□ -0.42
PKP4-213ENST00000486254 SMOQ99835 787 aa12.43□□□□□ -0.42
PKP4-213ENST00000486254 LPIN3Q9BQK8 851 aa12.43□□□□□ -0.42
PKP4-213ENST00000486254 MED10Q9BTT4 135 aa12.43□□□□□ -0.42
PKP4-213ENST00000486254 ELAC1Q9H777 363 aaKnown RBP12.43□□□□□ -0.42
PKP4-213ENST00000486254 TRMT13Q9NUP7 481 aaKnown RBP12.43□□□□□ -0.42
PKP4-213ENST00000486254 RNF19AQ9NV58 838 aa12.43□□□□□ -0.42
PKP4-213ENST00000486254 SENP1Q9P0U3 644 aa12.43□□□□□ -0.42
PKP4-213ENST00000486254 KANSL3Q9P2N6 904 aa12.43□□□□□ -0.42
PKP4-213ENST00000486254 GGA2Q9UJY4 613 aa12.43□□□□□ -0.42
PKP4-213ENST00000486254 FZD10Q9ULW2 581 aa12.43□□□□□ -0.42
PKP4-213ENST00000486254 ATXN2Q99700 1313 aaKnown RBP12.43□□□□□ -0.42
PKP4-213ENST00000486254 NLRC5Q86WI3 1866 aa12.43□□□□□ -0.42
PKP4-213ENST00000486254 AP1G2O75843 785 aa12.43□□□□□ -0.42
PKP4-213ENST00000486254 B3GAT3O94766 335 aa12.43□□□□□ -0.42
PKP4-213ENST00000486254 ZSCAN5DPP0CG00 497 aa12.43□□□□□ -0.42
PKP4-213ENST00000486254 HPDP32754 393 aaPredicted RBP12.43□□□□□ -0.42
PKP4-213ENST00000486254 PHBP35232 272 aa12.43□□□□□ -0.42
PKP4-213ENST00000486254 SULT1E1P49888 294 aa12.43□□□□□ -0.42
PKP4-213ENST00000486254 ATP1A2P50993 1020 aa12.43□□□□□ -0.42
PKP4-213ENST00000486254 AFF1P51825 1210 aaKnown RBP12.43□□□□□ -0.42
PKP4-213ENST00000486254 TKTL1P51854 596 aa12.43□□□□□ -0.42
PKP4-213ENST00000486254 SLC18A1P54219 525 aa12.43□□□□□ -0.42
PKP4-213ENST00000486254 KCNJ11Q14654 390 aa12.43□□□□□ -0.42
PKP4-213ENST00000486254 RAB6CQ53S08 254 aa12.43□□□□□ -0.42
PKP4-213ENST00000486254 SLC45A4Q5BKX6 768 aa12.43□□□□□ -0.42
PKP4-213ENST00000486254 ZC3H12AQ5D1E8 599 aaKnown RBP12.43□□□□□ -0.42
PKP4-213ENST00000486254 DNAJC21Q5F1R6 531 aaKnown RBP12.43□□□□□ -0.42
PKP4-213ENST00000486254 LHX8Q68G74 356 aa12.43□□□□□ -0.42
PKP4-213ENST00000486254 DARS2Q6PI48 645 aaKnown RBP12.43□□□□□ -0.42
PKP4-213ENST00000486254 GLB1LQ6UWU2 654 aa12.43□□□□□ -0.42
PKP4-213ENST00000486254 CD300LGQ6UXG3 332 aa12.43□□□□□ -0.42
PKP4-213ENST00000486254 UNC45BQ8IWX7 931 aa12.43□□□□□ -0.42
PKP4-213ENST00000486254 DEFB106AQ8N104 65 aa12.43□□□□□ -0.42
PKP4-213ENST00000486254 PDIK1LQ8N165 341 aa12.43□□□□□ -0.42
PKP4-213ENST00000486254 ATP11CQ8NB49 1132 aa12.43□□□□□ -0.42
PKP4-213ENST00000486254 ZMIZ2Q8NF64 920 aa12.43□□□□□ -0.42
PKP4-213ENST00000486254 CD99L2Q8TCZ2 262 aa12.43□□□□□ -0.42
PKP4-213ENST00000486254 EPS8L3Q8TE67 593 aaKnown RBP12.43□□□□□ -0.42
PKP4-213ENST00000486254 OLFM3Q96PB7 478 aa12.43□□□□□ -0.42
PKP4-213ENST00000486254 QKIQ96PU8 341 aaKnown RBP eCLIP12.43□□□□□ -0.42
PKP4-213ENST00000486254 RTP3Q9BQQ7 232 aa12.43□□□□□ -0.42
PKP4-213ENST00000486254 ADAM33Q9BZ11 813 aa12.43□□□□□ -0.42
PKP4-213ENST00000486254 RAB6CQ9H0N0 254 aa12.43□□□□□ -0.42
PKP4-213ENST00000486254 HMX1Q9NP08 348 aaPredicted RBP12.43□□□□□ -0.42
PKP4-213ENST00000486254 SAYSD1Q9NPB0 183 aa12.43□□□□□ -0.42
PKP4-213ENST00000486254 DMAP1Q9NPF5 467 aaPredicted RBP12.43□□□□□ -0.42
PKP4-213ENST00000486254 SAGE1Q9NXZ1 904 aa12.43□□□□□ -0.42
PKP4-213ENST00000486254 SAE1Q9UBE0 346 aaPredicted RBP12.43□□□□□ -0.42
PKP4-213ENST00000486254 SLC24A2Q9UI40 661 aa12.43□□□□□ -0.42
PKP4-213ENST00000486254 ZMYND8Q9ULU4 1186 aaPredicted RBP12.43□□□□□ -0.42
PKP4-213ENST00000486254 PCDHB8Q9UN66 801 aa12.43□□□□□ -0.42
PKP4-213ENST00000486254 A0A1W2PQ45 241 aaPredicted RBP12.42□□□□□ -0.42
PKP4-213ENST00000486254 A0A1W2PQY0 241 aa12.42□□□□□ -0.42
PKP4-213ENST00000486254 MYBPHLA2RUH7 354 aa12.42□□□□□ -0.42
PKP4-213ENST00000486254 CASTOR2A6NHX0 329 aa12.42□□□□□ -0.42
PKP4-213ENST00000486254 DCDC2CA8MYV0 355 aa12.42□□□□□ -0.42
PKP4-213ENST00000486254 H3BRJ5 948 aa12.42□□□□□ -0.42
PKP4-213ENST00000486254 CLDN5O00501 218 aa12.42□□□□□ -0.42
PKP4-213ENST00000486254 TRAPPC3O43617 180 aa12.42□□□□□ -0.42
PKP4-213ENST00000486254 GCATO75600 419 aa12.42□□□□□ -0.42
PKP4-213ENST00000486254 BEST1O76090 585 aa12.42□□□□□ -0.42
PKP4-213ENST00000486254 FAM107AO95990 144 aa12.42□□□□□ -0.42
PKP4-213ENST00000486254 ZBED1O96006 694 aa12.42□□□□□ -0.42
PKP4-213ENST00000486254 ETS1P14921 441 aa12.42□□□□□ -0.42
PKP4-213ENST00000486254 ACAT1P24752 427 aaKnown RBP12.42□□□□□ -0.42
PKP4-213ENST00000486254 RNASELQ05823 741 aaKnown RBP12.42□□□□□ -0.42
PKP4-213ENST00000486254 CA9Q16790 459 aa12.42□□□□□ -0.42
PKP4-213ENST00000486254 KCTD19Q17RG1 926 aaPredicted RBP12.42□□□□□ -0.42
PKP4-213ENST00000486254 DCAF6Q58WW2 860 aa12.42□□□□□ -0.42
PKP4-213ENST00000486254 THEM5Q8N1Q8 247 aa12.42□□□□□ -0.42
PKP4-213ENST00000486254 FAM71DQ8N9W8 422 aa12.42□□□□□ -0.42
PKP4-213ENST00000486254 MCUQ8NE86 351 aa12.42□□□□□ -0.42
PKP4-213ENST00000486254 FAM149B1Q96BN6 582 aa12.42□□□□□ -0.42
PKP4-213ENST00000486254 ZBTB9Q96C00 473 aa12.42□□□□□ -0.42
PKP4-213ENST00000486254 LRRC39Q96DD0 335 aa12.42□□□□□ -0.42
PKP4-213ENST00000486254 KCTD15Q96SI1 283 aaPredicted RBP12.42□□□□□ -0.42
PKP4-213ENST00000486254 DHX35Q9H5Z1 703 aaKnown RBP12.42□□□□□ -0.42
PKP4-213ENST00000486254 BCCIPQ9P287 314 aaKnown RBP eCLIP12.42□□□□□ -0.42
PKP4-213ENST00000486254 C5orf60A6NFR6 353 aa12.41□□□□□ -0.42
PKP4-213ENST00000486254 ERICH4A6NGS2 130 aa12.41□□□□□ -0.42
PKP4-213ENST00000486254 H7C0C1 242 aa12.41□□□□□ -0.42
PKP4-213ENST00000486254 ARVCFO00192 962 aa12.41□□□□□ -0.42
PKP4-213ENST00000486254 LTFP02788 710 aa12.41□□□□□ -0.42
PKP4-213ENST00000486254 INHAP05111 366 aa12.41□□□□□ -0.42
PKP4-213ENST00000486254 TFE3P19532 575 aaPredicted RBP12.41□□□□□ -0.42
PKP4-213ENST00000486254 CYP2C18P33260 490 aa12.41□□□□□ -0.42
PKP4-213ENST00000486254 HTR7P34969 479 aa12.41□□□□□ -0.42
PKP4-213ENST00000486254 ATP5OP48047 213 aa12.41□□□□□ -0.42
PKP4-213ENST00000486254 MAP3K7CLP57077 242 aa12.41□□□□□ -0.42
PKP4-213ENST00000486254 CDK16Q00536 496 aa12.41□□□□□ -0.42
PKP4-213ENST00000486254 TSPY1Q01534 308 aa12.41□□□□□ -0.42
PKP4-213ENST00000486254 GUCY1A3Q02108 690 aa12.41□□□□□ -0.42
PKP4-213ENST00000486254 SEMA3BQ13214 749 aa12.41□□□□□ -0.42
PKP4-213ENST00000486254 EFHC2Q5JST6 749 aa12.41□□□□□ -0.42
PKP4-213ENST00000486254 UBAP2Q5T6F2 1119 aaKnown RBP12.41□□□□□ -0.42
PKP4-213ENST00000486254 OVOS1Q6IE37 1185 aa12.41□□□□□ -0.42
PKP4-213ENST00000486254 C4orf50Q6ZRC1 276 aa12.41□□□□□ -0.42
PKP4-213ENST00000486254 TADA2BQ86TJ2 420 aa12.41□□□□□ -0.42
PKP4-213ENST00000486254 CCDC185Q8N715 623 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms