RNA–Protein interactions for RNA: ENST00000485980.1

PLXNB3-208, Transcript of plexin B3, humanhuman

TSL 3

Gene PLXNB3, Length 773 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNB3-208ENST00000485980 ETFBKMTQ8IXQ9 262 aa16.37■□□□□ 0.21
PLXNB3-208ENST00000485980 TERB1Q8NA31 727 aa16.37■□□□□ 0.21
PLXNB3-208ENST00000485980 OR5B17Q8NGF7 314 aa16.37■□□□□ 0.21
PLXNB3-208ENST00000485980 OR6B3Q8NGW1 331 aa16.37■□□□□ 0.21
PLXNB3-208ENST00000485980 IPO4Q8TEX9 1081 aaKnown RBP16.37■□□□□ 0.21
PLXNB3-208ENST00000485980 SETD7Q8WTS6 366 aaKnown RBP16.37■□□□□ 0.21
PLXNB3-208ENST00000485980 OTUB2Q96DC9 234 aa16.37■□□□□ 0.21
PLXNB3-208ENST00000485980 GSDMAQ96QA5 445 aa16.37■□□□□ 0.21
PLXNB3-208ENST00000485980 ACOX2Q99424 681 aa16.37■□□□□ 0.21
PLXNB3-208ENST00000485980 SPHK2Q9NRA0 654 aa16.37■□□□□ 0.21
PLXNB3-208ENST00000485980 INTS13Q9NVM9 706 aa16.37■□□□□ 0.21
PLXNB3-208ENST00000485980 CHORDC1Q9UHD1 332 aaPredicted RBP16.37■□□□□ 0.21
PLXNB3-208ENST00000485980 SETXQ7Z333 2677 aaKnown RBP16.37■□□□□ 0.21
PLXNB3-208ENST00000485980 CLIC2O15247 247 aa16.36■□□□□ 0.21
PLXNB3-208ENST00000485980 HOXC11O43248 304 aaPredicted RBP16.36■□□□□ 0.21
PLXNB3-208ENST00000485980 COCHO43405 550 aa16.36■□□□□ 0.21
PLXNB3-208ENST00000485980 EXOC3O60645 756 aa16.36■□□□□ 0.21
PLXNB3-208ENST00000485980 GJB3O75712 270 aa16.36■□□□□ 0.21
PLXNB3-208ENST00000485980 IRF1P10914 325 aa16.36■□□□□ 0.21
PLXNB3-208ENST00000485980 YWHAQP27348 245 aa16.36■□□□□ 0.21
PLXNB3-208ENST00000485980 CACNA2D1P54289 1103 aa16.36■□□□□ 0.21
PLXNB3-208ENST00000485980 SURF1Q15526 300 aa16.36■□□□□ 0.21
PLXNB3-208ENST00000485980 WDR45BQ5MNZ6 344 aa16.36■□□□□ 0.21
PLXNB3-208ENST00000485980 GRAMD4Q6IC98 578 aa16.36■□□□□ 0.21
PLXNB3-208ENST00000485980 TOGARAM2Q6ZUX3 1019 aa16.36■□□□□ 0.21
PLXNB3-208ENST00000485980 LIMS2Q7Z4I7 341 aa16.36■□□□□ 0.21
PLXNB3-208ENST00000485980 SLCO6A1Q86UG4 719 aa16.36■□□□□ 0.21
PLXNB3-208ENST00000485980 BBS7Q8IWZ6 715 aa16.36■□□□□ 0.21
PLXNB3-208ENST00000485980 XXYLT1Q8NBI6 393 aa16.36■□□□□ 0.21
PLXNB3-208ENST00000485980 GPT2Q8TD30 523 aa16.36■□□□□ 0.21
PLXNB3-208ENST00000485980 FBXO32Q969P5 355 aa16.36■□□□□ 0.21
PLXNB3-208ENST00000485980 COL26A1Q96A83 441 aa16.36■□□□□ 0.21
PLXNB3-208ENST00000485980 ZNF419Q96HQ0 510 aaPredicted RBP16.36■□□□□ 0.21
PLXNB3-208ENST00000485980 BBC3Q96PG8 261 aaPredicted RBP16.36■□□□□ 0.21
PLXNB3-208ENST00000485980 MRPL45Q9BRJ2 306 aaKnown RBP16.36■□□□□ 0.21
PLXNB3-208ENST00000485980 SLC6A17Q9H1V8 727 aa16.36■□□□□ 0.21
PLXNB3-208ENST00000485980 CD93Q9NPY3 652 aa16.36■□□□□ 0.21
PLXNB3-208ENST00000485980 HCN2Q9UL51 889 aa16.36■□□□□ 0.21
PLXNB3-208ENST00000485980 SMG1Q96Q15 3661 aaKnown RBP16.36■□□□□ 0.21
PLXNB3-208ENST00000485980 URB1O60287 2271 aaKnown RBP16.35■□□□□ 0.21
PLXNB3-208ENST00000485980 CLDN5O00501 218 aa16.35■□□□□ 0.21
PLXNB3-208ENST00000485980 PTPN1P18031 435 aaKnown RBP16.35■□□□□ 0.21
PLXNB3-208ENST00000485980 HOXD13P35453 343 aa16.35■□□□□ 0.21
PLXNB3-208ENST00000485980 GRIK2Q13002 908 aa16.35■□□□□ 0.21
PLXNB3-208ENST00000485980 SNRNP35Q16560 246 aaKnown RBP16.35■□□□□ 0.21
PLXNB3-208ENST00000485980 DUOXA2Q1HG44 320 aa16.35■□□□□ 0.21
PLXNB3-208ENST00000485980 HECTD3Q5T447 861 aa16.35■□□□□ 0.21
PLXNB3-208ENST00000485980 KIAA1324Q6UXG2 1013 aaKnown RBP16.35■□□□□ 0.21
PLXNB3-208ENST00000485980 NUP93Q8N1F7 819 aa16.35■□□□□ 0.21
PLXNB3-208ENST00000485980 GUF1Q8N442 669 aaKnown RBP16.35■□□□□ 0.21
PLXNB3-208ENST00000485980 PDZD8Q8NEN9 1154 aa16.35■□□□□ 0.21
PLXNB3-208ENST00000485980 FOXJ1Q92949 421 aa16.35■□□□□ 0.21
PLXNB3-208ENST00000485980 TSG101Q99816 390 aa16.35■□□□□ 0.21
PLXNB3-208ENST00000485980 ZNF518BQ9C0D4 1074 aa16.35■□□□□ 0.21
PLXNB3-208ENST00000485980 NACA2Q9H009 215 aa16.35■□□□□ 0.21
PLXNB3-208ENST00000485980 DNAJC17Q9NVM6 304 aaKnown RBP16.35■□□□□ 0.21
PLXNB3-208ENST00000485980 MAPK8IP1Q9UQF2 711 aa16.35■□□□□ 0.21
PLXNB3-208ENST00000485980 RAD54BQ9Y620 910 aa16.35■□□□□ 0.21
PLXNB3-208ENST00000485980 BPTFQ12830 3046 aa16.35■□□□□ 0.21
PLXNB3-208ENST00000485980 PTPRJQ12913 1337 aa16.35■□□□□ 0.21
PLXNB3-208ENST00000485980 ASXL3Q9C0F0 2248 aa16.35■□□□□ 0.21
PLXNB3-208ENST00000485980 APC2O95996 2303 aa16.35■□□□□ 0.21
PLXNB3-208ENST00000485980 MEI4A8MW99 385 aa16.34■□□□□ 0.21
PLXNB3-208ENST00000485980 PDXKO00764 312 aa16.34■□□□□ 0.21
PLXNB3-208ENST00000485980 TGFB1I1O43294 461 aa16.34■□□□□ 0.21
PLXNB3-208ENST00000485980 CLSTN1O94985 981 aa16.34■□□□□ 0.21
PLXNB3-208ENST00000485980 RTN3O95197 1032 aaPredicted RBP16.34■□□□□ 0.21
PLXNB3-208ENST00000485980 SKOR2Q2VWA4 1001 aaPredicted RBP16.34■□□□□ 0.21
PLXNB3-208ENST00000485980 ZNF658Q5TYW1 1059 aaPredicted RBP16.34■□□□□ 0.21
PLXNB3-208ENST00000485980 CBWD2Q8IUF1 395 aa16.34■□□□□ 0.21
PLXNB3-208ENST00000485980 C12orf56Q8IXR9 622 aa16.34■□□□□ 0.21
PLXNB3-208ENST00000485980 ELOA2Q8IYF1 753 aaPredicted RBP16.34■□□□□ 0.21
PLXNB3-208ENST00000485980 ZFRQ96KR1 1074 aaKnown RBP16.34■□□□□ 0.21
PLXNB3-208ENST00000485980 ZDHHC5Q9C0B5 715 aa16.34■□□□□ 0.21
PLXNB3-208ENST00000485980 ELOVL4Q9GZR5 314 aa16.34■□□□□ 0.21
PLXNB3-208ENST00000485980 MIR1-1HGQ9H1L0 117 aa16.34■□□□□ 0.21
PLXNB3-208ENST00000485980 DPEP3Q9H4B8 488 aa16.34■□□□□ 0.21
PLXNB3-208ENST00000485980 CCSER2Q9H7U1 834 aa16.34■□□□□ 0.21
PLXNB3-208ENST00000485980 TMEM30AQ9NV96 361 aa16.34■□□□□ 0.21
PLXNB3-208ENST00000485980 PCOLCE2Q9UKZ9 415 aa16.34■□□□□ 0.21
PLXNB3-208ENST00000485980 FRMD4BQ9Y2L6 1034 aa16.34■□□□□ 0.21
PLXNB3-208ENST00000485980 STARD13Q9Y3M8 1113 aa16.34■□□□□ 0.21
PLXNB3-208ENST00000485980 PCDHA5Q9Y5H7 936 aa16.34■□□□□ 0.21
PLXNB3-208ENST00000485980 CELSR3Q9NYQ7 3312 aa16.34■□□□□ 0.21
PLXNB3-208ENST00000485980 PTPRBP23467 1997 aa16.33■□□□□ 0.21
PLXNB3-208ENST00000485980 GOLGA8CPA6NN73 597 aa16.33■□□□□ 0.2
PLXNB3-208ENST00000485980 NEDD8-MDP1E9PL57 170 aa16.33■□□□□ 0.2
PLXNB3-208ENST00000485980 NR3C1P04150 777 aa16.33■□□□□ 0.2
PLXNB3-208ENST00000485980 RPL13P26373 211 aaKnown RBP16.33■□□□□ 0.2
PLXNB3-208ENST00000485980 PPP1R2P41236 205 aa16.33■□□□□ 0.2
PLXNB3-208ENST00000485980 CEP135Q66GS9 1140 aa16.33■□□□□ 0.2
PLXNB3-208ENST00000485980 SMYD4Q8IYR2 804 aaPredicted RBP16.33■□□□□ 0.2
PLXNB3-208ENST00000485980 RDH13Q8NBN7 331 aa16.33■□□□□ 0.2
PLXNB3-208ENST00000485980 ERCC4Q92889 916 aaPredicted RBP16.33■□□□□ 0.2
PLXNB3-208ENST00000485980 WBP2Q969T9 261 aa16.33■□□□□ 0.2
PLXNB3-208ENST00000485980 XPO6Q96QU8 1125 aaKnown RBP16.33■□□□□ 0.2
PLXNB3-208ENST00000485980 B3GNT5Q9BYG0 378 aa16.33■□□□□ 0.2
PLXNB3-208ENST00000485980 CACNA2D2Q9NY47 1150 aa16.33■□□□□ 0.2
PLXNB3-208ENST00000485980 NME7Q9Y5B8 376 aa16.33■□□□□ 0.2
PLXNB3-208ENST00000485980 A0A1B0GTW7 788 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms