RNA–Protein interactions for RNA: ENST00000485513.1

HLA-F-227, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 778 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-227ENST00000485513 USP3Q9Y6I4 520 aa27.05■■□□□ 1.92
HLA-F-227ENST00000485513 TM4SF5O14894 197 aa27.04■■□□□ 1.92
HLA-F-227ENST00000485513 TRIM24O15164 1050 aa27.04■■□□□ 1.92
HLA-F-227ENST00000485513 CACNG3O60359 315 aa27.04■■□□□ 1.92
HLA-F-227ENST00000485513 TYRP14679 529 aa27.04■■□□□ 1.92
HLA-F-227ENST00000485513 P2RY2P41231 377 aa27.04■■□□□ 1.92
HLA-F-227ENST00000485513 TCERG1LQ5VWI1 586 aa27.04■■□□□ 1.92
HLA-F-227ENST00000485513 RNF43Q68DV7 783 aa27.04■■□□□ 1.92
HLA-F-227ENST00000485513 TPGS1Q6ZTW0 290 aa27.04■■□□□ 1.92
HLA-F-227ENST00000485513 SLC4A11Q8NBS3 891 aa27.04■■□□□ 1.92
HLA-F-227ENST00000485513 RLN3Q8WXF3 142 aa27.04■■□□□ 1.92
HLA-F-227ENST00000485513 SPACA7Q96KW9 195 aa27.04■■□□□ 1.92
HLA-F-227ENST00000485513 ARID3AQ99856 593 aa27.04■■□□□ 1.92
HLA-F-227ENST00000485513 FAM124BQ9H5Z6 455 aaPredicted RBP27.04■■□□□ 1.92
HLA-F-227ENST00000485513 MARK1Q9P0L2 795 aa27.04■■□□□ 1.92
HLA-F-227ENST00000485513 TCRBV21S2A2A0A5A6 115 aa27.03■■□□□ 1.92
HLA-F-227ENST00000485513 SLC16A3O15427 465 aaKnown RBP27.03■■□□□ 1.92
HLA-F-227ENST00000485513 RALAP11233 206 aa27.03■■□□□ 1.92
HLA-F-227ENST00000485513 RAD23BP54727 409 aa27.03■■□□□ 1.92
HLA-F-227ENST00000485513 COBLL1Q53SF7 1204 aa27.03■■□□□ 1.92
HLA-F-227ENST00000485513 DCAF17Q5H9S7 520 aaPredicted RBP27.03■■□□□ 1.92
HLA-F-227ENST00000485513 CYP2U1Q7Z449 544 aa27.03■■□□□ 1.92
HLA-F-227ENST00000485513 PGBD3Q8N328 593 aa27.03■■□□□ 1.92
HLA-F-227ENST00000485513 ZNF276Q8N554 614 aa27.03■■□□□ 1.92
HLA-F-227ENST00000485513 TATDN2Q93075 761 aa27.03■■□□□ 1.92
HLA-F-227ENST00000485513 CDK5RAP1Q96SZ6 601 aaKnown RBP27.03■■□□□ 1.92
HLA-F-227ENST00000485513 EDEM2Q9BV94 578 aa27.03■■□□□ 1.92
HLA-F-227ENST00000485513 CLIC5Q9NZA1 410 aa27.03■■□□□ 1.92
HLA-F-227ENST00000485513 SMC2O95347 1197 aa27.02■■□□□ 1.92
HLA-F-227ENST00000485513 DHPSP49366 369 aaPredicted RBP27.02■■□□□ 1.92
HLA-F-227ENST00000485513 FKBP3Q00688 224 aaKnown RBP27.02■■□□□ 1.92
HLA-F-227ENST00000485513 CBWD6Q4V339 395 aa27.02■■□□□ 1.92
HLA-F-227ENST00000485513 CBWD3Q5JTY5 395 aa27.02■■□□□ 1.92
HLA-F-227ENST00000485513 CBWD5Q5RIA9 395 aa27.02■■□□□ 1.92
HLA-F-227ENST00000485513 Q6ZNB5 142 aa27.02■■□□□ 1.92
HLA-F-227ENST00000485513 MIB1Q86YT6 1006 aa27.02■■□□□ 1.92
HLA-F-227ENST00000485513 STARD13Q9Y3M8 1113 aa27.02■■□□□ 1.92
HLA-F-227ENST00000485513 PLXND1Q9Y4D7 1925 aa27.01■■□□□ 1.91
HLA-F-227ENST00000485513 MAP3K13O43283 966 aa27.01■■□□□ 1.91
HLA-F-227ENST00000485513 STC2O76061 302 aa27.01■■□□□ 1.91
HLA-F-227ENST00000485513 NTSR1P30989 418 aa27.01■■□□□ 1.91
HLA-F-227ENST00000485513 BYSLQ13895 437 aaKnown RBP27.01■■□□□ 1.91
HLA-F-227ENST00000485513 ARHGAP17Q68EM7 881 aa27.01■■□□□ 1.91
HLA-F-227ENST00000485513 ANKRD40Q6AI12 368 aa27.01■■□□□ 1.91
HLA-F-227ENST00000485513 LPCAT2Q7L5N7 544 aa27.01■■□□□ 1.91
HLA-F-227ENST00000485513 ZC3H3Q8IXZ2 948 aaKnown RBP27.01■■□□□ 1.91
HLA-F-227ENST00000485513 ENGASEQ8NFI3 743 aa27.01■■□□□ 1.91
HLA-F-227ENST00000485513 CNTNAP3BQ96NU0 1288 aa27.01■■□□□ 1.91
HLA-F-227ENST00000485513 CNTNAP3Q9BZ76 1288 aa27.01■■□□□ 1.91
HLA-F-227ENST00000485513 UBXN6Q9BZV1 441 aa27.01■■□□□ 1.91
HLA-F-227ENST00000485513 HCN2Q9UL51 889 aa27.01■■□□□ 1.91
HLA-F-227ENST00000485513 ACACBO00763 2458 aa27■■□□□ 1.91
HLA-F-227ENST00000485513 KHNYNO15037 678 aaKnown RBP27■■□□□ 1.91
HLA-F-227ENST00000485513 HOXB2P14652 356 aa27■■□□□ 1.91
HLA-F-227ENST00000485513 PMS1P54277 932 aaKnown RBP27■■□□□ 1.91
HLA-F-227ENST00000485513 SLC8A3P57103 927 aa27■■□□□ 1.91
HLA-F-227ENST00000485513 BECN1Q14457 450 aa27■■□□□ 1.91
HLA-F-227ENST00000485513 EGFLAMQ63HQ2 1017 aa27■■□□□ 1.91
HLA-F-227ENST00000485513 ERCC4Q92889 916 aaPredicted RBP27■■□□□ 1.91
HLA-F-227ENST00000485513 SMARCE1Q969G3 411 aa27■■□□□ 1.91
HLA-F-227ENST00000485513 GTPBP4Q9BZE4 634 aaKnown RBP27■■□□□ 1.91
HLA-F-227ENST00000485513 RASAL2Q9UJF2 1139 aa27■■□□□ 1.91
HLA-F-227ENST00000485513 COQ4Q9Y3A0 265 aa27■■□□□ 1.91
HLA-F-227ENST00000485513 LNP1A1A4G5 178 aa26.99■■□□□ 1.91
HLA-F-227ENST00000485513 WASP42768 502 aa26.99■■□□□ 1.91
HLA-F-227ENST00000485513 COG7P83436 770 aa26.99■■□□□ 1.91
HLA-F-227ENST00000485513 MAP7D1Q3KQU3 841 aa26.99■■□□□ 1.91
HLA-F-227ENST00000485513 PIGZQ86VD9 579 aa26.99■■□□□ 1.91
HLA-F-227ENST00000485513 ARHGAP18Q8N392 663 aa26.99■■□□□ 1.91
HLA-F-227ENST00000485513 FRMD1Q8N878 549 aa26.99■■□□□ 1.91
HLA-F-227ENST00000485513 ANKRD52Q8NB46 1076 aa26.99■■□□□ 1.91
HLA-F-227ENST00000485513 SPATA20Q8TB22 786 aa26.99■■□□□ 1.91
HLA-F-227ENST00000485513 PIGKQ92643 395 aa26.99■■□□□ 1.91
HLA-F-227ENST00000485513 BHMTQ93088 406 aa26.99■■□□□ 1.91
HLA-F-227ENST00000485513 LSM14BQ9BX40 385 aaKnown RBP26.99■■□□□ 1.91
HLA-F-227ENST00000485513 MBD1Q9UIS9 605 aaPredicted RBP26.99■■□□□ 1.91
HLA-F-227ENST00000485513 HOOK1Q9UJC3 728 aaKnown RBP26.99■■□□□ 1.91
HLA-F-227ENST00000485513 ZNF510Q9Y2H8 683 aa26.99■■□□□ 1.91
HLA-F-227ENST00000485513 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa26.98■■□□□ 1.91
HLA-F-227ENST00000485513 DGKGP49619 791 aa26.98■■□□□ 1.91
HLA-F-227ENST00000485513 NUCB2P80303 420 aa26.98■■□□□ 1.91
HLA-F-227ENST00000485513 LRRC63Q05C16 580 aa26.98■■□□□ 1.91
HLA-F-227ENST00000485513 EFEMP1Q12805 493 aa26.98■■□□□ 1.91
HLA-F-227ENST00000485513 CUL2Q13617 745 aa26.98■■□□□ 1.91
HLA-F-227ENST00000485513 RAB41Q5JT25 222 aa26.98■■□□□ 1.91
HLA-F-227ENST00000485513 SDE2Q6IQ49 451 aa26.98■■□□□ 1.91
HLA-F-227ENST00000485513 TOGARAM2Q6ZUX3 1019 aa26.98■■□□□ 1.91
HLA-F-227ENST00000485513 TMEFF1Q8IYR6 380 aa26.98■■□□□ 1.91
HLA-F-227ENST00000485513 ARMCX3Q9UH62 379 aaPredicted RBP26.98■■□□□ 1.91
HLA-F-227ENST00000485513 TRIM49BA6NDI0 452 aa26.97■■□□□ 1.91
HLA-F-227ENST00000485513 PRRT4C9JH25 899 aa26.97■■□□□ 1.91
HLA-F-227ENST00000485513 KLKB1P03952 638 aa26.97■■□□□ 1.91
HLA-F-227ENST00000485513 GABRG2P18507 467 aa26.97■■□□□ 1.91
HLA-F-227ENST00000485513 RSRC2Q7L4I2 434 aaKnown RBP26.97■■□□□ 1.91
HLA-F-227ENST00000485513 CHPFQ8IZ52 775 aa26.97■■□□□ 1.91
HLA-F-227ENST00000485513 TIGD1Q96MW7 591 aa26.97■■□□□ 1.91
HLA-F-227ENST00000485513 ACOX2Q99424 681 aa26.97■■□□□ 1.91
HLA-F-227ENST00000485513 DCLK3Q9C098 648 aa26.97■■□□□ 1.91
HLA-F-227ENST00000485513 PLK2Q9NYY3 685 aa26.97■■□□□ 1.91
HLA-F-227ENST00000485513 GON4LQ3T8J9 2241 aa26.97■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms